Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0693G097 Amborella trichopoda HOM05D006195 ORTHO05D007710 2.6e-266 921.4 439 100.0
MBI14_g15641_MAGBIO Magnolia biondii HOM05D006195 ORTHO05D007710 3.9e-169 598.6 398 72.1
QL04p018330 Quercus lobata HOM05D006195 ORTHO05D007710 4.3e-168 595.1 422 66.8
GSVIVG01003194001 Vitis vinifera HOM05D006195 ORTHO05D007710 2.8e-167 592.4 407 69.0
TAR629G3096 Trochodendron aralioides HOM05D006195 ORTHO05D007710 4.8e-167 591.7 388 72.4
Aqoxy1G02740 Aquilegia oxysepala HOM05D006195 ORTHO05D007710 1.4e-166 590.1 401 70.3
CsaV3_1G011800 Cucumis sativus L. HOM05D006195 ORTHO05D007710 1.2e-165 587.0 411 65.9
Gohir.D05G168600 Gossypium hirsutum HOM05D006195 ORTHO05D007710 3.4e-165 585.5 400 70.5
Gorai.009G173800 Gossypium raimondii HOM05D006195 ORTHO05D007710 4.5e-165 585.1 400 69.8
Gohir.A05G165600 Gossypium hirsutum HOM05D006195 ORTHO05D007710 9.9e-165 583.9 400 69.5
TWI38G0511 Tripterygium wilfordii HOM05D006195 ORTHO05D007710 1.3e-164 583.6 431 66.4
CiPaw.09G158100 Carya illinoinensis HOM05D006195 ORTHO05D007710 8.4e-164 580.9 402 67.7
ClCG03G005530 Citrullus lanatus HOM05D006195 ORTHO05D007710 1.1e-163 580.5 411 65.9
EL10Ac8g20527 Beta vulgaris HOM05D006195 ORTHO05D007710 3.2e-163 578.9 399 68.4
PSO675G1294 Papaver somniferum HOM05D006195 ORTHO05D007710 4.2e-163 578.6 426 65.0
Lj2A280G38 Lonicera japonica HOM05D006195 ORTHO05D007710 9.3e-163 577.4 455 63.3
Atru.chr10.2006 Acer truncatum HOM05D006195 ORTHO05D007710 1.6e-162 576.6 422 65.6
Rhsim02G0120000 Rhododendron simsii HOM05D006195 ORTHO05D007710 6.0e-162 574.7 411 65.5
Ciclev10015313m.g Citrus clementina HOM05D006195 ORTHO05D007710 1.0e-161 573.9 425 64.9
Thecc.06G199000 Theobroma cacao HOM05D006195 ORTHO05D007710 1.3e-161 573.5 392 69.1
Actinidia24060 Actinidia chinensis HOM05D006195 ORTHO05D007710 2.3e-161 572.8 398 68.3
Ca_18483_v3 Cicer arietinum L. HOM05D006195 ORTHO05D007710 3.0e-161 572.4 431 64.3
Potri.011G043000 Populus trichocarpa HOM05D006195 ORTHO05D007710 3.9e-161 572.0 420 66.0
COL.COLO4_31584 Corchorus olitorius HOM05D006195 ORTHO05D007710 6.7e-161 571.2 417 65.7
SGA_v2.0_scaffold7G03951 Striga asiatica HOM05D006195 ORTHO05D007710 6.7e-161 571.2 404 68.6
Sed0022279 Sechium edule HOM05D006195 ORTHO05D007710 8.7e-161 570.9 382 68.3
Prupe.4G036600 Prunus persica HOM05D006195 ORTHO05D007710 1.1e-160 570.5 416 66.6
Medtr4g091080 Medicago truncatula HOM05D006195 ORTHO05D007710 3.3e-160 568.9 386 69.9
Sopen02g023920 Solanum pennellii HOM05D006195 ORTHO05D007710 5.6e-160 568.2 426 63.1
Solyc02g079110.3 Solanum lycopersicum HOM05D006195 ORTHO05D007710 7.4e-160 567.8 423 63.6
CANSAT56G3748 Cannabis sativa HOM05D006195 ORTHO05D007710 1.3e-159 567.0 406 66.7
Cpa.g.sc27.120 Carica papaya HOM05D006195 ORTHO05D007710 1.3e-159 567.0 405 66.7
Eucgr.E03701 Eucalyptus grandis HOM05D006195 ORTHO05D007710 1.6e-159 566.6 409 66.5
FvH4_3g04030 Fragaria vesca HOM05D006195 ORTHO05D007710 3.7e-159 565.5 415 66.3
HanXRQChr14g0437281 Helianthus annuus HOM05D006195 ORTHO05D007710 4.8e-159 565.1 428 65.0
Lalb_Chr09g0327371 Lupinus albus HOM05D006195 ORTHO05D007710 4.8e-159 565.1 420 65.2
Phvul.002G222200 Phaseolus vulgaris HOM05D006195 ORTHO05D007710 8.2e-159 564.3 428 64.7
RcHm_v2.0_Chr5g0006371 Rosa chinensis HOM05D006195 ORTHO05D007710 1.1e-158 563.9 403 67.0
BcaNung02791 Brassica carinata HOM05D006195 ORTHO05D007710 1.8e-158 563.1 422 63.3
Oeu038214.1 Olea europaea HOM05D006195 ORTHO05D007710 1.8e-158 563.1 398 69.3
Lsat_1_v5_gn_7_19641 Lactuca sativa HOM05D006195 ORTHO05D007710 2.4e-158 562.8 408 65.7
MD10G1303200 Malus domestica HOM05D006195 ORTHO05D007710 2.4e-158 562.8 406 66.3
PGSC0003DMG400022408 Solanum tuberosum HOM05D006195 ORTHO05D007710 2.4e-158 562.8 401 65.8
SalBow8G2471 Salvia bowleyana HOM05D006195 ORTHO05D007710 3.1e-158 562.4 410 66.6
Sc17g0006620 Simmondsia chinensis HOM05D006195 ORTHO05D007710 3.1e-158 562.4 410 65.4
Carub.0007s1990 Capsella rubella HOM05D006195 ORTHO05D007710 4.0e-158 562.0 398 66.8
Migut.I00196 Erythranthe guttata HOM05D006195 ORTHO05D007710 6.9e-158 561.2 377 71.4
Migut.M01211 Erythranthe guttata HOM05D006195 ORTHO05D007710 6.9e-158 561.2 405 68.9
AL7G32530 Arabidopsis lyrata HOM05D006195 ORTHO05D007710 1.2e-157 560.5 397 67.0
AT4G21520 Arabidopsis thaliana HOM05D006195 ORTHO05D007710 1.2e-157 560.5 402 65.9
FAN11G1039 Fragaria x ananassa HOM05D006195 ORTHO05D007710 1.2e-157 560.5 418 65.3
vmacro15867 Vaccinium macrocarpon HOM05D006195 ORTHO05D007710 1.5e-157 560.1 387 67.4
arahy.Tifrunner.gnm1.ann1.HDHM3Z Arachis hypogaea HOM05D006195 ORTHO05D007710 3.4e-157 558.9 378 69.6
THA.LOC104806275 Tarenaya hassleriana HOM05D006195 ORTHO05D007710 4.5e-157 558.5 401 66.3
CARHR228180 Cardamine hirsuta HOM05D006195 ORTHO05D007710 7.6e-157 557.8 414 64.7
Thhalv10025271m.g Eutrema salsugineum HOM05D006195 ORTHO05D007710 7.6e-157 557.8 413 64.9
TPR.G32422 Trifolium pratense HOM05D006195 ORTHO05D007710 1.3e-156 557.0 390 69.2
PGR042G1193 Punica granatum HOM05D006195 ORTHO05D007710 1.7e-156 556.6 387 67.4
arahy.Tifrunner.gnm1.ann1.IWY5CJ Arachis hypogaea HOM05D006195 ORTHO05D007710 2.2e-156 556.2 406 66.0
MSTRG.8639 Avicennia marina HOM05D006195 ORTHO05D007710 4.9e-156 555.1 387 69.3
Glyma.07G190200 Glycine max HOM05D006195 ORTHO05D007710 4.9e-156 555.1 399 66.7
VMungo0251G2515 Vigna mungo HOM05D006195 ORTHO05D007710 4.9e-156 555.1 428 64.5
Peaxi162Scf00355g00914 Petunia axillaris HOM05D006195 ORTHO05D007710 1.1e-155 553.9 422 64.5
C01p15450 Brassica napus HOM05D006195 ORTHO05D007710 1.4e-155 553.5 398 65.6
BolC1t01499H Brassica oleracea HOM05D006195 ORTHO05D007710 1.4e-155 553.5 398 65.6
Sp7g19630 Schrenkiella parvula HOM05D006195 ORTHO05D007710 4.2e-155 552.0 398 65.6
Aa31LG6G3540 Aethionema arabicum HOM05D006195 ORTHO05D007710 9.3e-155 550.8 411 64.2
A01p12830 Brassica napus HOM05D006195 ORTHO05D007710 9.3e-155 550.8 406 64.0
Cc02_g12450 Coffea canephora HOM05D006195 ORTHO05D007710 1.2e-154 550.4 412 65.5
BraA01t01227Z Brassica rapa HOM05D006195 ORTHO05D007710 1.6e-154 550.1 407 63.9
MD05G1325300 Malus domestica HOM05D006195 ORTHO05D007710 5.1e-153 545.0 412 65.0
Os03g0738000 Oryza sativa ssp. japonica HOM05D006195 ORTHO05D007710 5.1e-153 545.0 384 68.8
Cfa000355 Carpinus fangiana HOM05D006195 ORTHO05D007710 2.5e-152 542.7 402 65.4
Haze_06571 Corylus avellana HOM05D006195 ORTHO05D007710 1.3e-151 540.4 364 69.8
ECA236G2696 Erigeron canadensis HOM05D006195 ORTHO05D007710 1.3e-151 540.4 379 68.1
Nitab4.5_0009994g0040 Nicotiana tabacum HOM05D006195 ORTHO05D007710 1.3e-151 540.4 466 59.0
Duzib235G1322 Durio zibethinus HOM05D006195 ORTHO05D007710 8.2e-151 537.7 398 64.6
Lj4g0017156 Lotus japonicus HOM05D006195 ORTHO05D007710 1.2e-149 533.9 416 62.0
Manes.17G039200 Manihot esculenta HOM05D006195 ORTHO05D007710 5.0e-148 528.5 386 65.3
FAN25G3765 Fragaria x ananassa HOM05D006195 ORTHO05D007710 1.4e-147 526.9 411 63.5
Sabra11G0029600 Salix brachista HOM05D006195 ORTHO05D001726 3.2e-147 525.8 373 68.1
MELO3C002557.2 Cucumis melo HOM05D006195 ORTHO05D007710 2.7e-146 522.7 413 61.5
Pp3c6_22670 Physcomitrium patens HOM05D006195 ORTHO05D007710 2.5e-144 516.2 410 60.5
Zm00001eb056530 Zea mays HOM05D006195 ORTHO05D007710 7.4e-144 514.6 384 66.1
CSS0049192 Camellia sinensis var. sinensis HOM05D006195 ORTHO05D007710 2.4e-142 509.6 369 65.6
Mapoly0082s0056 Marchantia polymorpha HOM05D006195 ORTHO05D007710 2.6e-141 506.1 418 56.5
CDE11G0466 Ceratophyllum demersum HOM05D006195 ORTHO05D007710 3.4e-141 505.8 362 66.3
FAN21G3429 Fragaria x ananassa HOM05D006195 ORTHO05D007710 8.5e-140 501.1 405 62.0
AagrBONN_evm.TU.Sc2ySwM_344.4192 Anthoceros agrestis HOM05D006195 ORTHO05D007710 1.1e-139 500.7 420 57.4
Ah.14g088920 Amaranthus hybridus HOM05D006195 ORTHO05D007710 1.9e-139 500.0 399 60.2
DCAR_008069 Daucus carota HOM05D006195 ORTHO05D007710 4.2e-139 498.8 401 60.1
AUR62014719 Chenopodium quinoa HOM05D006195 ORTHO05D007710 2.4e-134 483.0 372 65.3
MBI14_g13652_MAGBIO Magnolia biondii HOM05D006195 ORTHO05D007710 2.0e-125 453.4 407 59.0
AUR62016899 Chenopodium quinoa HOM05D006195 ORTHO05D007710 2.6e-125 453.0 389 58.4
SMO137G0351 Selaginella moellendorffii HOM05D006195 ORTHO05D007710 1.1e-123 447.6 362 58.0
Hund23609 Selenicereus undatus HOM05D006195 ORTHO05D007710 3.0e-121 439.5 321 67.0
Nitab4.5_0000190g0110 Nicotiana tabacum HOM05D006195 ORTHO05D007710 5.7e-120 435.3 330 63.9
unitig_37.g12337 Utricularia gibba HOM05D006195 ORTHO05D007710 1.0e-116 424.5 402 56.2
CBR_g41455 Chara braunii HOM05D006195 ORTHO05D007710 7.2e-115 418.3 420 49.3
Dinv40483 Davidia involucrata HOM05D006195 ORTHO05D007710 1.2e-114 417.5 291 68.0
CBR_g20417 Chara braunii HOM05D006195 ORTHO05D007710 3.0e-113 412.9 421 48.9
Psat7g108560 Pisum sativum HOM05D006195 ORTHO05D007710 3.4e-112 409.5 302 66.2
SMO116G0485 Selaginella moellendorffii HOM05D006195 ORTHO05D007710 6.4e-87 325.5 277 57.4
Cre07.g326350 Chlamydomonas reinhardtii HOM05D006195 ORTHO05D007710 2.1e-85 320.5 388 45.1
Eucgr.L01396 Eucalyptus grandis HOM05D006195 ORTHO05D007710 2.5e-83 313.5 229 65.1
HPP92_018057 Vanilla planifolia HOM05D006195 ORTHO05D007710 6.8e-81 305.4 288 55.6
Nn1g03899 Nelumbo nucifera HOM05D006195 ORTHO05D007710 1.3e-79 301.2 459 41.2
Potri.004G034600 Populus trichocarpa HOM05D006195 ORTHO05D007710 2.9e-79 300.1 251 57.8
TPR.G37128 Trifolium pratense HOM05D006195 ORTHO05D007710 3.2e-78 296.6 180 75.0
SalBow6G2099 Salvia bowleyana HOM05D006195 ORTHO05D007710 2.3e-76 290.4 171 78.9
SalBow6G4337 Salvia bowleyana HOM05D006195 ORTHO05D007710 2.3e-76 290.4 171 78.9
MCO07G204 Micromonas commoda HOM05D006195 ORTHO05D007710 6.2e-74 282.3 392 41.1
SalBow1G5137 Salvia bowleyana HOM05D006195 ORTHO05D007710 5.3e-65 252.7 146 80.1
GSVIVG01003189001 Vitis vinifera HOM05D006195 ORTHO05D007710 1.9e-51 207.6 127 72.4
Manes.10G084901 Manihot esculenta HOM05D006195 ORTHO05D007710 3.5e-45 186.8 127 70.1
Dinv18994 Davidia involucrata HOM05D006195 ORTHO05D007710 7.9e-45 185.7 219 47.0
SalBow4G2205 Salvia bowleyana HOM05D006195 ORTHO05D007710 1.0e-44 185.3 103 82.5
PRCOL_00004057 Prasinoderma coloniale HOM05D006195 ORTHO05D007710 2.8e-42 177.2 299 36.8
SalBow1G7985 Salvia bowleyana HOM05D006195 ORTHO05D007710 1.1e-38 165.2 111 73.0
SHI02125 Sapria himalayana HOM05D006195 ORTHO05D007710 6.1e-37 159.5 123 60.2
Nitab4.5_0003834g0010 Nicotiana tabacum HOM05D006195 ORTHO05D007710 6.7e-36 156.0 91 73.6
Thecc.06G199100 Theobroma cacao HOM05D006195 ORTHO05D007710 4.1e-33 146.7 99 68.7
CSS0050458 Camellia sinensis var. sinensis HOM05D000911 ORTHO05D007710 1.2e-32 145.2 89 71.9
SEGI_17138 Sequoiadendron giganteum HOM05D006195 ORTHO05D007710 7.9e-29 132.5 81 66.7
SHI48938 Sapria himalayana HOM05D006195 ORTHO05D007710 2.0e-27 127.9 125 52.0
HPP92_018063 Vanilla planifolia HOM05D006195 ORTHO05D007710 5.0e-23 113.2 147 45.6
SHI02124 Sapria himalayana HOM05D006195 ORTHO05D007710 7.0e-17 92.8 198 36.4
AL117U10020 Arabidopsis lyrata HOM05D064442 ORTHO05D011622 4.4e-11 73.6 68 52.9
AUR62043984 Chenopodium quinoa HOM05D002999 ORTHO05D003137 2.2e-07 61.2 216 24.1
Nitab4.5_0004238g0040 Nicotiana tabacum HOM05D002999 ORTHO05D003137 2.2e-07 61.2 208 24.5
AagrBONN_evm.TU.Sc2ySwM_228.3731 Anthoceros agrestis HOM05D002999 ORTHO05D003137 1.5e-06 58.5 354 21.5
Hma1.2p1_0643F.1_g194600 Hydrangea macrophylla HOM05D002999 ORTHO05D003137 1.9e-06 58.2 247 23.5
Sc19g0004770 Simmondsia chinensis HOM05D002999 ORTHO05D003137 1.9e-06 58.2 247 22.3
Sabra14G0102500 Salix brachista HOM05D002999 ORTHO05D003137 3.2e-06 57.4 150 28.7


User provided reference genes

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