Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0693G087 Amborella trichopoda HOM05D005421 ORTHO05D026565 1.1e-63 246.5 128 100.0
TAR362G1077 Trochodendron aralioides HOM05D005421 ORTHO05D026565 3.8e-16 88.6 66 80.3
Lj9A202T65 Lonicera japonica HOM05D005421 ORTHO05D007601 1.3e-11 73.6 65 69.2
TAR636G1951 Trochodendron aralioides HOM05D005421 ORTHO05D007601 6.3e-11 71.2 55 83.6
Actinidia35540 Actinidia chinensis HOM05D005421 ORTHO05D007601 1.4e-10 70.1 55 74.5
Cc02_g34540 Coffea canephora HOM05D005421 ORTHO05D007601 1.4e-10 70.1 58 77.6
MBI18_g04564_MAGBIO Magnolia biondii HOM05D005421 ORTHO05D007601 1.4e-10 70.1 55 80.0
CDE02G0330 Ceratophyllum demersum HOM05D005421 ORTHO05D007601 2.4e-10 69.3 55 80.0
Nn4g25707 Nelumbo nucifera HOM05D005421 ORTHO05D007601 2.4e-10 69.3 55 80.0
Oeu029357.1 Olea europaea HOM05D005421 ORTHO05D026565 2.4e-10 69.3 70 58.6
vmacro01533 Vaccinium macrocarpon HOM05D005421 ORTHO05D007601 2.4e-10 69.3 55 76.4
GSVIVG01031188001 Vitis vinifera HOM05D005421 ORTHO05D007601 2.4e-10 69.3 55 81.8
Cfa006671 Carpinus fangiana HOM05D005421 ORTHO05D007601 5.4e-10 68.2 95 48.4
Dinv24409 Davidia involucrata HOM05D005421 ORTHO05D007601 1.2e-09 67.0 57 75.4
Oeu045895.1 Olea europaea HOM05D005421 ORTHO05D007601 1.2e-09 67.0 70 54.3
Gohir.A10G155100 Gossypium hirsutum HOM05D005421 ORTHO05D007601 2.7e-09 65.9 65 58.5
Gohir.D10G110800 Gossypium hirsutum HOM05D005421 ORTHO05D007601 2.7e-09 65.9 65 58.5
Gorai.011G122100 Gossypium raimondii HOM05D005421 ORTHO05D007601 2.7e-09 65.9 65 58.5
PSO407G0035 Papaver somniferum HOM05D005421 ORTHO05D007601 3.5e-09 65.5 55 72.7
SalBow1G5723 Salvia bowleyana HOM05D005421 ORTHO05D007601 4.5e-09 65.1 59 69.5
Glyma.20G238500 Glycine max HOM05D005421 ORTHO05D007601 5.9e-09 64.7 55 69.1
Dinv30846 Davidia involucrata HOM05D005421 ORTHO05D007601 7.7e-09 64.3 54 77.8
Psat6g151720 Pisum sativum HOM05D005421 ORTHO05D007601 7.7e-09 64.3 55 74.5
CSS0007056 Camellia sinensis var. sinensis HOM05D005421 ORTHO05D007601 1.0e-08 63.9 55 72.7
CSS0046729 Camellia sinensis var. sinensis HOM05D005421 ORTHO05D007601 1.0e-08 63.9 55 72.7
CsaV3_2G006840 Cucumis sativus L. HOM05D005421 ORTHO05D007601 1.3e-08 63.5 56 58.9
Glyma.10G149900 Glycine max HOM05D005421 ORTHO05D007601 1.7e-08 63.2 52 75.0
QL03p018920 Quercus lobata HOM05D005421 ORTHO05D007601 1.7e-08 63.2 55 69.1
Solyc01g100060.4 Solanum lycopersicum HOM05D005421 ORTHO05D007601 1.7e-08 63.2 59 67.8
Sopen01g043590 Solanum pennellii HOM05D005421 ORTHO05D007601 1.7e-08 63.2 59 67.8
Aqoxy2G02863 Aquilegia oxysepala HOM05D005421 ORTHO05D007601 2.9e-08 62.4 55 70.9
MELO3C004206.2 Cucumis melo HOM05D005421 ORTHO05D007601 2.9e-08 62.4 56 57.1
Lj5g0011296 Lotus japonicus HOM05D005421 ORTHO05D007601 2.9e-08 62.4 55 72.7
Phvul.007G199400 Phaseolus vulgaris HOM05D005421 ORTHO05D007601 2.9e-08 62.4 55 65.5
CiPaw.07G025400 Carya illinoinensis HOM05D005421 ORTHO05D007601 3.8e-08 62.0 55 60.0
PSO170G1114 Papaver somniferum HOM05D005421 ORTHO05D007601 6.5e-08 61.2 55 70.9
SGA_v2.0_scaffold4G01947 Striga asiatica HOM05D005421 ORTHO05D007601 6.5e-08 61.2 56 64.3
Rhsim11G0092200 Rhododendron simsii HOM05D005421 ORTHO05D007601 1.1e-07 60.5 54 72.2
Ca_10154_v3 Cicer arietinum L. HOM05D005421 ORTHO05D007601 1.9e-07 59.7 55 72.7
Ca_29832_v3 Cicer arietinum L. HOM05D005421 ORTHO05D007601 1.9e-07 59.7 55 72.7
Peaxi162Scf00037g01816 Petunia axillaris HOM05D005421 ORTHO05D007601 1.9e-07 59.7 58 70.7
ClCG02G015170 Citrullus lanatus HOM05D005421 ORTHO05D007601 2.5e-07 59.3 56 55.4
Haze_04100 Corylus avellana HOM05D005421 ORTHO05D007601 7.2e-07 57.8 56 60.7
COL.COLO4_26689 Corchorus olitorius HOM05D005421 ORTHO05D007601 1.2e-06 57.0 66 56.1
Sed0018701 Sechium edule HOM05D005421 ORTHO05D007601 1.2e-06 57.0 56 53.6
PGR031G1007 Punica granatum HOM05D005421 ORTHO05D007601 1.6e-06 56.6 56 69.6
Cpa.g.sc48.125 Carica papaya HOM05D005421 ORTHO05D007601 2.7e-06 55.8 65 64.6
FvH4_6g07010 Fragaria vesca HOM05D005421 ORTHO05D007601 2.7e-06 55.8 54 63.0
Manes.13G000084 Manihot esculenta HOM05D005421 ORTHO05D007601 2.7e-06 55.8 56 66.1
CANSAT54G2596 Cannabis sativa HOM05D005421 ORTHO05D007601 3.6e-06 55.5 58 69.0
FAN02G3486 Fragaria x ananassa HOM05D005421 ORTHO05D007601 4.7e-06 55.1 54 64.8
RcHm_v2.0_Chr3g0456541 Rosa chinensis HOM05D005421 ORTHO05D007601 4.7e-06 55.1 54 61.1
Lalb_Chr02g0148011 Lupinus albus HOM05D005421 ORTHO05D007601 6.1e-06 54.7 55 67.3
PGSC0003DMG400024728 Solanum tuberosum HOM05D005421 ORTHO05D007601 6.1e-06 54.7 56 66.1
FAN05G0688 Fragaria x ananassa HOM05D005421 ORTHO05D007601 8.0e-06 54.3 54 59.3
FAN09G4258 Fragaria x ananassa HOM05D000389 ORTHO05D000287 8.0e-06 54.3 54 51.9
FAN14G1909 Fragaria x ananassa HOM05D005421 ORTHO05D007601 8.0e-06 54.3 54 59.3


User provided reference genes

Program Settings