Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0693G068 Amborella trichopoda HOM05D006913 ORTHO05D008720 8.6e-76 287.0 151 100.0
TWI59G1195 Tripterygium wilfordii HOM05D006913 ORTHO05D008720 4.9e-63 244.6 141 86.5
Migut.D00043 Erythranthe guttata HOM05D006913 ORTHO05D008720 8.4e-63 243.8 146 84.9
TAR362G1022 Trochodendron aralioides HOM05D006913 ORTHO05D008720 1.6e-61 239.6 143 82.5
CSS0007691 Camellia sinensis var. sinensis HOM05D006913 ORTHO05D008720 2.7e-61 238.8 140 83.6
CSS0013168 Camellia sinensis var. sinensis HOM05D006913 ORTHO05D008720 2.7e-61 238.8 140 83.6
Thecc.01G320200 Theobroma cacao HOM05D006913 ORTHO05D008720 1.8e-60 236.1 144 80.6
Dinv12109 Davidia involucrata HOM05D006913 ORTHO05D008720 3.9e-60 235.0 145 81.4
Haze_05096 Corylus avellana HOM05D006913 ORTHO05D008720 5.1e-60 234.6 142 80.3
Cfa004859 Carpinus fangiana HOM05D006913 ORTHO05D008720 6.7e-60 234.2 142 80.3
Nn3g21840 Nelumbo nucifera HOM05D006913 ORTHO05D008720 1.9e-59 232.6 145 79.3
CAN.G1280.40 Capsicum annuum HOM05D006913 ORTHO05D008720 3.3e-59 231.9 145 80.7
Sopen06g004130 Solanum pennellii HOM05D006913 ORTHO05D008720 3.3e-59 231.9 150 78.7
CiPaw.07G121500 Carya illinoinensis HOM05D006913 ORTHO05D008720 4.3e-59 231.5 142 80.3
FAN28G1862 Fragaria x ananassa HOM05D006913 ORTHO05D008720 5.6e-59 231.1 144 78.5
Solyc06g009400.3 Solanum lycopersicum HOM05D006913 ORTHO05D008720 7.4e-59 230.7 150 78.0
PGSC0003DMG400007277 Solanum tuberosum HOM05D006913 ORTHO05D008720 7.4e-59 230.7 150 78.0
Hma1.2p1_0408F.1_g146440 Hydrangea macrophylla HOM05D006913 ORTHO05D008720 9.6e-59 230.3 150 78.7
Ciclev10022378m.g Citrus clementina HOM05D006913 ORTHO05D008720 1.3e-58 229.9 139 82.0
Dinv33147 Davidia involucrata HOM05D006913 ORTHO05D008720 1.6e-58 229.6 149 77.2
Glyma.19G219300 Glycine max HOM05D006913 ORTHO05D008720 1.6e-58 229.6 141 78.7
MBI18_g09652_MAGBIO Magnolia biondii HOM05D006913 ORTHO05D008720 2.1e-58 229.2 144 80.6
FvH4_1g26590 Fragaria vesca HOM05D006913 ORTHO05D008720 2.8e-58 228.8 144 77.8
Lj1g0024926 Lotus japonicus HOM05D006913 ORTHO05D008720 2.8e-58 228.8 142 81.0
Manes.01G231800 Manihot esculenta HOM05D006913 ORTHO05D008720 3.6e-58 228.4 141 78.7
Aqoxy5G02741 Aquilegia oxysepala HOM05D006913 ORTHO05D008720 4.8e-58 228.0 142 81.0
Duzib138G1774 Durio zibethinus HOM05D006913 ORTHO05D008720 6.2e-58 227.6 145 79.3
SalBow3G0392 Salvia bowleyana HOM05D006913 ORTHO05D008720 6.2e-58 227.6 147 78.2
MBI18_g11536_MAGBIO Magnolia biondii HOM05D006913 ORTHO05D008720 8.1e-58 227.3 144 80.6
THA.LOC104801315 Tarenaya hassleriana HOM05D006913 ORTHO05D008720 8.1e-58 227.3 146 76.0
QL12p018506 Quercus lobata HOM05D006913 ORTHO05D008720 1.4e-57 226.5 141 81.6
GSVIVG01028181001 Vitis vinifera HOM05D006913 ORTHO05D008720 1.4e-57 226.5 146 77.4
TPR.G4038 Trifolium pratense HOM05D006913 ORTHO05D008720 2.4e-57 225.7 140 80.0
MSTRG.21716 Avicennia marina HOM05D006913 ORTHO05D008720 3.1e-57 225.3 149 78.5
VMungo1383G0882 Vigna mungo HOM05D006913 ORTHO05D008720 3.1e-57 225.3 141 78.0
Medtr7g109970 Medicago truncatula HOM05D006913 ORTHO05D008720 4.0e-57 224.9 140 78.6
PSO170G2504 Papaver somniferum HOM05D006913 ORTHO05D008720 5.3e-57 224.6 141 78.7
Cpa.g.c29544.2 Carica papaya HOM05D006913 ORTHO05D008720 6.9e-57 224.2 138 79.7
MD17G1280100 Malus domestica HOM05D006913 ORTHO05D008720 6.9e-57 224.2 143 76.9
PSO724G1078 Papaver somniferum HOM05D006913 ORTHO05D008720 6.9e-57 224.2 141 78.7
Prupe.3G005300 Prunus persica HOM05D006913 ORTHO05D008720 6.9e-57 224.2 143 76.9
Lalb_Chr04g0260061 Lupinus albus HOM05D006913 ORTHO05D008720 9.0e-57 223.8 144 79.2
Potri.002G191300 Populus trichocarpa HOM05D006913 ORTHO05D008720 1.2e-56 223.4 144 79.9
Nitab4.5_0003324g0110 Nicotiana tabacum HOM05D006913 ORTHO05D008720 1.5e-56 223.0 160 73.8
PGR083G1650 Punica granatum HOM05D006913 ORTHO05D008720 2.6e-56 222.2 156 73.7
RcHm_v2.0_Chr3g0486731 Rosa chinensis HOM05D006913 ORTHO05D008720 2.6e-56 222.2 143 76.9
Atru.chr5.924 Acer truncatum HOM05D006913 ORTHO05D008720 3.4e-56 221.9 142 79.6
Nitab4.5_0000363g0020 Nicotiana tabacum HOM05D006913 ORTHO05D008720 3.4e-56 221.9 160 72.5
Sed0005932 Sechium edule HOM05D006913 ORTHO05D008720 2.9e-55 218.8 139 78.4
Sc05g0000220 Simmondsia chinensis HOM05D006913 ORTHO05D008720 2.9e-55 218.8 138 78.3
MD09G1287900 Malus domestica HOM05D006913 ORTHO05D008720 1.1e-54 216.9 141 75.2
arahy.Tifrunner.gnm1.ann1.6PPK8V Arachis hypogaea HOM05D006913 ORTHO05D008720 1.4e-54 216.5 142 78.2
Psat3g018680 Pisum sativum HOM05D006913 ORTHO05D008720 1.4e-54 216.5 131 80.2
Sed0008492 Sechium edule HOM05D006913 ORTHO05D008720 1.4e-54 216.5 140 76.4
CsaV3_7G030270 Cucumis sativus L. HOM05D006913 ORTHO05D008720 3.2e-54 215.3 139 76.3
Os05g0133100 Oryza sativa ssp. japonica HOM05D006913 ORTHO05D008720 4.2e-54 214.9 141 76.6
Glyma.03G222100 Glycine max HOM05D006913 ORTHO05D008720 7.1e-54 214.2 160 69.4
HPP92_002654 Vanilla planifolia HOM05D006913 ORTHO05D008720 7.1e-54 214.2 143 75.5
MELO3C023629.2 Cucumis melo HOM05D006913 ORTHO05D008720 1.2e-53 213.4 139 75.5
Nitab4.5_0000222g0190 Nicotiana tabacum HOM05D006913 ORTHO05D008720 1.2e-53 213.4 150 72.0
unitig_578.g16634 Utricularia gibba HOM05D006913 ORTHO05D008720 3.5e-53 211.8 153 70.6
DCAR_002917 Daucus carota HOM05D006913 ORTHO05D008720 1.0e-52 210.3 144 75.0
Sp6g01770 Schrenkiella parvula HOM05D006913 ORTHO05D008720 1.3e-52 209.9 131 77.9
CDE11G0810 Ceratophyllum demersum HOM05D006913 ORTHO05D008720 1.8e-52 209.5 137 74.5
AL6G51370 Arabidopsis lyrata HOM05D006913 ORTHO05D008720 2.3e-52 209.1 133 76.7
FAN26G0114 Fragaria x ananassa HOM05D006913 ORTHO05D008720 2.3e-52 209.1 176 63.6
Carub.0006s3531 Capsella rubella HOM05D006913 ORTHO05D008720 3.0e-52 208.8 133 75.9
BcaB01g02398 Brassica carinata HOM05D006913 ORTHO05D008720 5.1e-52 208.0 140 73.6
Cc01_g21970 Coffea canephora HOM05D006913 ORTHO05D008720 6.7e-52 207.6 124 83.1
Thhalv10028983m.g Eutrema salsugineum HOM05D006913 ORTHO05D008720 6.7e-52 207.6 131 77.9
FAN19G0677 Fragaria x ananassa HOM05D006913 ORTHO05D008720 1.1e-51 206.8 176 63.1
AT4G01900 Arabidopsis thaliana HOM05D006913 ORTHO05D008720 2.5e-51 205.7 133 75.2
BcaC01g06792 Brassica carinata HOM05D006913 ORTHO05D008720 2.5e-51 205.7 140 72.9
C03p38310 Brassica napus HOM05D006913 ORTHO05D008720 2.5e-51 205.7 140 72.9
BolC3t16112H Brassica oleracea HOM05D006913 ORTHO05D008720 2.5e-51 205.7 140 72.9
BraA03t12321Z Brassica rapa HOM05D006913 ORTHO05D008720 2.5e-51 205.7 140 72.9
CiPaw.08G086000 Carya illinoinensis HOM05D006913 ORTHO05D008720 5.6e-51 204.5 134 79.1
A03p31400 Brassica napus HOM05D006913 ORTHO05D008720 7.4e-51 204.1 140 72.1
Rhsim01G0292800 Rhododendron simsii HOM05D006913 ORTHO05D008720 2.8e-50 202.2 145 71.7
Aa31LG5G1440 Aethionema arabicum HOM05D006913 ORTHO05D008720 8.1e-50 200.7 134 73.9
ClCG09G004810 Citrullus lanatus HOM05D006913 ORTHO05D008720 1.8e-49 199.5 161 64.6
Peaxi162Scf00058g00218 Petunia axillaris HOM05D006913 ORTHO05D008720 1.8e-49 199.5 146 71.9
Sabra02G0164300 Salix brachista HOM05D006913 ORTHO05D008720 5.3e-49 198.0 173 63.6
BcaB01g02393 Brassica carinata HOM05D006913 ORTHO05D008720 9.0e-49 197.2 133 72.9
Pp3c4_15530 Physcomitrium patens HOM05D006913 ORTHO05D008720 1.3e-47 193.4 135 69.6
arahy.Tifrunner.gnm1.ann1.IRZ7G5 Arachis hypogaea HOM05D006913 ORTHO05D008720 2.2e-47 192.6 140 72.1
Mapoly0061s0127 Marchantia polymorpha HOM05D006913 ORTHO05D008720 1.4e-46 189.9 129 70.5
AagrBONN_evm.TU.Sc2ySwM_228.182 Anthoceros agrestis HOM05D006913 ORTHO05D008720 6.3e-42 174.5 125 68.8
COL.COLO4_23180 Corchorus olitorius HOM05D006913 ORTHO05D008720 6.3e-42 174.5 106 82.1
Eucgr.H00899 Eucalyptus grandis HOM05D006913 ORTHO05D008720 6.9e-41 171.0 147 62.6
vmacro15097 Vaccinium macrocarpon HOM05D006913 ORTHO05D008720 1.2e-40 170.2 104 80.8
Lj1C13T3 Lonicera japonica HOM05D006913 ORTHO05D008720 2.6e-40 169.1 108 80.6
Solyc01g015000.3 Solanum lycopersicum HOM05D006913 ORTHO05D008720 3.4e-40 168.7 112 76.8
AUR62024592 Chenopodium quinoa HOM05D006913 ORTHO05D008720 8.5e-39 164.1 104 76.9
SEGI_19322 Sequoiadendron giganteum HOM05D006913 ORTHO05D008720 2.5e-38 162.5 113 72.6
SMO364G0946 Selaginella moellendorffii HOM05D006913 ORTHO05D008720 4.2e-38 161.8 102 77.5
SGA_v2.0_scaffold80G25710 Striga asiatica HOM05D006913 ORTHO05D008720 4.2e-38 161.8 113 76.1
Ca_09230_v3 Cicer arietinum L. HOM05D006913 ORTHO05D008720 7.2e-38 161.0 97 82.5
FAN23G2363 Fragaria x ananassa HOM05D000049 ORTHO05D000027 6.9e-33 144.4 99 75.8
Cre07.g357350 Chlamydomonas reinhardtii HOM05D006913 ORTHO05D008720 1.7e-31 139.8 127 54.3
Duzib211G0548 Durio zibethinus HOM05D006913 ORTHO05D008720 1.4e-30 136.7 108 61.1
Hund09668 Selenicereus undatus HOM05D006913 ORTHO05D008720 7.2e-30 134.4 133 57.9
Oeu038057.1 Olea europaea HOM05D006913 ORTHO05D008720 1.6e-29 133.3 146 51.4
Phvul.001G215500 Phaseolus vulgaris HOM05D006913 ORTHO05D008720 2.1e-29 132.9 86 75.6
CARHR249910 Cardamine hirsuta HOM05D006913 ORTHO05D008720 5.1e-28 128.3 87 77.0
MCO04G045 Micromonas commoda HOM05D006913 ORTHO05D008720 8.8e-28 127.5 134 52.2
GSVIVG01010608001 Vitis vinifera HOM05D006913 ORTHO05D008720 2.2e-26 122.9 71 90.1
GSVIVG01037028001 Vitis vinifera HOM05D006913 ORTHO05D008720 2.2e-26 122.9 71 90.1
Hma1.2p1_3252F.1_g334540 Hydrangea macrophylla HOM05D006913 ORTHO05D008720 3.1e-25 119.0 142 51.4
Eucgr.L01805 Eucalyptus grandis HOM05D006913 ORTHO05D008720 4.5e-24 115.2 78 70.5
HPP92_027923 Vanilla planifolia HOM05D006913 ORTHO05D008720 5.5e-22 108.2 69 79.7
Nitab4.5_0001013g0020 Nicotiana tabacum HOM05D006913 ORTHO05D008720 6.1e-21 104.8 68 72.1
HPP92_027922 Vanilla planifolia HOM05D006913 ORTHO05D008720 2.8e-18 95.9 66 66.7
Haze_27360 Corylus avellana HOM05D006913 ORTHO05D008720 1.3e-15 87.0 109 37.6
C09p01450 Brassica napus HOM05D006913 ORTHO05D008720 1.6e-08 63.5 39 71.8
BolC9t53077H Brassica oleracea HOM05D006913 ORTHO05D008720 1.6e-08 63.5 39 71.8


User provided reference genes

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