Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0693G059 Amborella trichopoda HOM05D007336 ORTHO05D009339 2.4e-53 211.8 103 100.0
TAR362G0973 Trochodendron aralioides HOM05D007336 ORTHO05D009339 6.6e-35 150.6 94 74.5
Cfa006663 Carpinus fangiana HOM05D007336 ORTHO05D009339 1.1e-32 143.3 88 73.9
CiPaw.08G158700 Carya illinoinensis HOM05D007336 ORTHO05D009339 1.1e-32 143.3 88 76.1
Manes.01G127100 Manihot esculenta HOM05D007336 ORTHO05D009339 1.8e-32 142.5 87 75.9
QL03p019121 Quercus lobata HOM05D007336 ORTHO05D009339 2.3e-32 142.1 86 75.6
GSVIVG01031156001 Vitis vinifera HOM05D007336 ORTHO05D009339 3.1e-32 141.7 88 73.9
Haze_04108 Corylus avellana HOM05D002548 ORTHO05D003031 8.9e-32 140.2 84 75.0
MELO3C004210.2 Cucumis melo HOM05D007336 ORTHO05D009339 1.5e-31 139.4 89 71.9
MBI18_g25083_MAGBIO Magnolia biondii HOM05D007336 ORTHO05D009339 4.4e-31 137.9 92 72.8
ClCG02G015210 Citrullus lanatus HOM05D007336 ORTHO05D009339 7.5e-31 137.1 89 70.8
Potri.005G021800 Populus trichocarpa HOM05D007336 ORTHO05D009339 7.5e-31 137.1 88 71.6
Atru.chr1.2191 Acer truncatum HOM05D007336 ORTHO05D009339 1.3e-30 136.3 88 71.6
Atru.chr1.2192 Acer truncatum HOM05D007336 ORTHO05D009339 1.3e-30 136.3 88 71.6
Prupe.6G317700 Prunus persica HOM05D007336 ORTHO05D009339 1.3e-30 136.3 87 74.7
CsaV3_2G006800 Cucumis sativus L. HOM05D007336 ORTHO05D009339 3.7e-30 134.8 89 69.7
Eucgr.H03266 Eucalyptus grandis HOM05D007336 ORTHO05D009339 3.7e-30 134.8 94 70.2
Sed0016582 Sechium edule HOM05D007336 ORTHO05D009339 3.7e-30 134.8 87 72.4
MD12G1210100 Malus domestica HOM05D007336 ORTHO05D009339 4.9e-30 134.4 87 71.3
MD04G1197300 Malus domestica HOM05D007336 ORTHO05D009339 1.1e-29 133.3 92 66.3
Prupe.2G221300 Prunus persica HOM05D007336 ORTHO05D009339 1.4e-29 132.9 90 68.9
CANSAT54G2288 Cannabis sativa HOM05D007336 ORTHO05D009339 2.4e-29 132.1 86 70.9
CDE02G0601 Ceratophyllum demersum HOM05D007336 ORTHO05D009339 2.4e-29 132.1 85 72.9
Ciclev10002848m.g Citrus clementina HOM05D007336 ORTHO05D009339 2.4e-29 132.1 92 70.7
Aqoxy2G02873 Aquilegia oxysepala HOM05D007336 ORTHO05D009339 3.2e-29 131.7 83 74.7
SEGI_32823 Sequoiadendron giganteum HOM05D007336 ORTHO05D009339 3.2e-29 131.7 93 68.8
Eucgr.H03264 Eucalyptus grandis HOM05D007336 ORTHO05D009339 9.2e-29 130.2 94 68.1
FAN02G4454 Fragaria x ananassa HOM05D007336 ORTHO05D009339 2.1e-28 129.0 87 71.3
FvH4_6g06960 Fragaria vesca HOM05D007336 ORTHO05D009339 2.7e-28 128.6 87 70.1
FAN05G1709 Fragaria x ananassa HOM05D007336 ORTHO05D009339 3.5e-28 128.3 87 70.1
FAN05G3591 Fragaria x ananassa HOM05D007336 ORTHO05D009339 3.5e-28 128.3 87 70.1
Duzib128G0390 Durio zibethinus HOM05D007336 ORTHO05D009339 7.8e-28 127.1 92 66.3
COL.COLO4_03798 Corchorus olitorius HOM05D007336 ORTHO05D009339 1.3e-27 126.3 92 65.2
HPP92_013733 Vanilla planifolia HOM05D007336 ORTHO05D009339 1.7e-27 125.9 85 68.2
FAN09G1805 Fragaria x ananassa HOM05D007336 ORTHO05D009339 3.0e-27 125.2 87 69.0
FAN14G5314 Fragaria x ananassa HOM05D007336 ORTHO05D009339 3.0e-27 125.2 87 69.0
Gorai.007G303000 Gossypium raimondii HOM05D007336 ORTHO05D009339 3.9e-27 124.8 87 67.8
Lj1g0024848 Lotus japonicus HOM05D007336 ORTHO05D009339 3.9e-27 124.8 92 59.8
vmacro08103 Vaccinium macrocarpon HOM05D007336 ORTHO05D009339 5.1e-27 124.4 88 69.3
Cc03_g01420 Coffea canephora HOM05D007336 ORTHO05D009339 6.6e-27 124.0 88 68.2
Thecc.05G317300 Theobroma cacao HOM05D007336 ORTHO05D009339 6.6e-27 124.0 92 63.0
Eucgr.H03263 Eucalyptus grandis HOM05D007336 ORTHO05D009339 8.6e-27 123.6 83 71.1
Phvul.001G227200 Phaseolus vulgaris HOM05D007336 ORTHO05D009339 8.6e-27 123.6 95 62.1
Migut.G00122 Erythranthe guttata HOM05D007336 ORTHO05D009339 1.1e-26 123.2 88 68.2
Eucgr.H03265 Eucalyptus grandis HOM05D007336 ORTHO05D009339 1.5e-26 122.9 83 71.1
Eucgr.L02901 Eucalyptus grandis HOM05D007336 ORTHO05D009339 1.5e-26 122.9 83 71.1
PGR031G1948 Punica granatum HOM05D007336 ORTHO05D009339 1.5e-26 122.9 86 69.8
RcHm_v2.0_Chr3g0456501 Rosa chinensis HOM05D007336 ORTHO05D009339 1.5e-26 122.9 87 66.7
Psat0s3672g0040 Pisum sativum HOM05D007336 ORTHO05D009339 1.9e-26 122.5 92 59.8
Dinv44340 Davidia involucrata HOM05D007336 ORTHO05D009339 2.5e-26 122.1 88 68.2
Glyma.19G230700 Glycine max HOM05D007336 ORTHO05D009339 2.5e-26 122.1 92 59.8
Gohir.D11G280800 Gossypium hirsutum HOM05D007336 ORTHO05D009339 2.5e-26 122.1 92 64.1
Rhsim04G0227800 Rhododendron simsii HOM05D007336 ORTHO05D009339 3.3e-26 121.7 88 68.2
Actinidia40305 Actinidia chinensis HOM05D007336 ORTHO05D009339 4.3e-26 121.3 88 65.9
VMungo1383G0834 Vigna mungo HOM05D007336 ORTHO05D009339 5.6e-26 120.9 90 58.9
CSS0001044 Camellia sinensis var. sinensis HOM05D007336 ORTHO05D009339 7.3e-26 120.6 90 65.6
arahy.Tifrunner.gnm1.ann1.N7WCQ3 Arachis hypogaea HOM05D000001 ORTHO05D010781 2.1e-25 119.0 89 62.9
Lsat_1_v5_gn_6_76001 Lactuca sativa HOM05D007336 ORTHO05D009339 2.8e-25 118.6 88 64.8
Lalb_Chr16g0391581 Lupinus albus HOM05D007336 ORTHO05D009339 2.8e-25 118.6 92 57.6
TPR.G39916 Trifolium pratense HOM05D007336 ORTHO05D009339 2.8e-25 118.6 92 59.8
arahy.Tifrunner.gnm1.ann1.63GRQU Arachis hypogaea HOM05D007336 ORTHO05D010781 3.6e-25 118.2 89 62.9
THA.LOC104805904 Tarenaya hassleriana HOM05D007336 ORTHO05D009339 3.6e-25 118.2 82 67.1
PGSC0003DMG400006241 Solanum tuberosum HOM05D007336 ORTHO05D009339 4.7e-25 117.9 84 66.7
Dinv29713 Davidia involucrata HOM05D002548 ORTHO05D003031 8.1e-25 117.1 87 66.7
MSTRG.3884 Avicennia marina HOM05D007336 ORTHO05D009339 1.1e-24 116.7 89 62.9
CAN.G14.12 Capsicum annuum HOM05D007336 ORTHO05D009339 1.4e-24 116.3 84 65.5
HanXRQChr13g0413951 Helianthus annuus HOM05D007336 ORTHO05D009339 1.4e-24 116.3 86 65.1
Medtr7g112530 Medicago truncatula HOM05D007336 ORTHO05D009339 2.4e-24 115.5 92 55.4
BcaB04g20156 Brassica carinata HOM05D007336 ORTHO05D009339 3.1e-24 115.2 82 65.9
Nitab4.5_0002755g0010 Nicotiana tabacum HOM05D007336 ORTHO05D009339 1.2e-23 113.2 86 66.3
AUR62018066 Chenopodium quinoa HOM05D007336 ORTHO05D009339 1.5e-23 112.8 85 62.4
SalBow2G0618 Salvia bowleyana HOM05D007336 ORTHO05D009339 1.5e-23 112.8 85 64.7
AL1G65880 Arabidopsis lyrata HOM05D007336 ORTHO05D009339 2.0e-23 112.5 82 63.4
Solyc01g065710.3 Solanum lycopersicum HOM05D007336 ORTHO05D009339 2.0e-23 112.5 84 65.5
Sopen01g027110 Solanum pennellii HOM05D007336 ORTHO05D009339 2.0e-23 112.5 84 65.5
A01p27330 Brassica napus HOM05D007336 ORTHO05D009339 2.6e-23 112.1 82 63.4
C01p35170 Brassica napus HOM05D007336 ORTHO05D009339 2.6e-23 112.1 82 63.4
BolC1t03475H Brassica oleracea HOM05D007336 ORTHO05D009339 2.6e-23 112.1 82 63.4
BraA01t02872Z Brassica rapa HOM05D007336 ORTHO05D009339 2.6e-23 112.1 82 63.4
Prupe.3G209800 Prunus persica HOM05D007336 ORTHO05D009339 2.6e-23 112.1 107 55.1
AUR62015269 Chenopodium quinoa HOM05D007336 ORTHO05D009339 3.4e-23 111.7 91 57.1
Thhalv10023757m.g Eutrema salsugineum HOM05D007336 ORTHO05D009339 4.4e-23 111.3 82 62.2
Nitab4.5_0000306g0320 Nicotiana tabacum HOM05D007336 ORTHO05D009339 5.8e-23 110.9 88 63.6
Peaxi162Scf00065g01021 Petunia axillaris HOM05D007336 ORTHO05D009339 5.8e-23 110.9 88 63.6
Zm00001eb300400 Zea mays HOM05D007336 ORTHO05D009339 5.8e-23 110.9 91 60.4
Hund20531 Selenicereus undatus HOM05D007336 ORTHO05D009339 9.9e-23 110.2 89 58.4
Aa31LG2G11600 Aethionema arabicum HOM05D007336 ORTHO05D009339 1.3e-22 109.8 82 61.0
SGA_v2.0_scaffold104G30104 Striga asiatica HOM05D007336 ORTHO05D009339 2.2e-22 109.0 88 60.2
Sc19g0005520 Simmondsia chinensis HOM05D007336 ORTHO05D009339 2.9e-22 108.6 85 63.5
Cpa.g.sc48.123 Carica papaya HOM05D007336 ORTHO05D009339 8.4e-22 107.1 114 49.1
AT1G56260 Arabidopsis thaliana HOM05D007336 ORTHO05D009339 1.1e-21 106.7 81 64.2
Ah.04g153680 Amaranthus hybridus HOM05D007336 ORTHO05D009339 2.4e-21 105.5 86 59.3
DCAR_030493 Daucus carota HOM05D007336 ORTHO05D009339 5.4e-21 104.4 89 52.8
CARHR289820 Cardamine hirsuta HOM05D007336 ORTHO05D009339 9.2e-21 103.6 82 58.5
Sp2g06650 Schrenkiella parvula HOM05D007336 ORTHO05D009339 9.2e-21 103.6 82 58.5
PSO832G0037 Papaver somniferum HOM05D007336 ORTHO05D009339 1.2e-20 103.2 95 50.5
BcaC09g49567 Brassica carinata HOM05D007336 ORTHO05D009339 2.1e-20 102.4 82 59.8
EL10Ac3g06656 Beta vulgaris HOM05D007336 ORTHO05D009339 4.6e-20 101.3 85 56.5
Carub.0002s0790 Capsella rubella HOM05D007336 ORTHO05D009339 1.0e-19 100.1 83 59.0
AagrBONN_evm.TU.Sc2ySwM_344.3688 Anthoceros agrestis HOM05D007336 ORTHO05D009339 3.0e-19 98.6 84 61.9
Gohir.A11G270600 Gossypium hirsutum HOM05D007336 ORTHO05D009339 2.5e-18 95.5 66 66.7
Pp3c22_13440 Physcomitrium patens HOM05D007336 ORTHO05D009339 9.6e-18 93.6 86 48.8
unitig_46.g18696 Utricularia gibba HOM05D007336 ORTHO05D009339 1.6e-17 92.8 81 56.8
SMO137G0008 Selaginella moellendorffii HOM05D007336 ORTHO05D009339 7.6e-15 84.0 83 51.8
Nn4g25729 Nelumbo nucifera HOM05D007336 ORTHO05D009339 2.1e-12 75.9 52 65.4
Oeu031988.1 Olea europaea HOM05D007336 ORTHO05D009339 3.1e-08 62.0 52 57.7
Glyma.03G233600 Glycine max HOM05D007336 ORTHO05D009339 5.3e-08 61.2 49 53.1
Mapoly0064s0018 Marchantia polymorpha HOM05D007336 ORTHO05D009339 3.8e-06 55.1 50 52.0


User provided reference genes

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