Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0693G021 Amborella trichopoda HOM05D000483 ORTHO05D000158 3.2e-53 211.5 106 100.0
BcaC07g40201 Brassica carinata HOM05D000483 ORTHO05D000158 1.2e-10 70.1 46 73.9
BcaC07g40258 Brassica carinata HOM05D000483 ORTHO05D000158 4.4e-10 68.2 46 71.7
A07p24140 Brassica napus HOM05D000483 ORTHO05D000158 9.9e-10 67.0 35 85.7
BraA07t30058Z Brassica rapa HOM05D000483 ORTHO05D000158 9.9e-10 67.0 35 85.7
AL5G40210 Arabidopsis lyrata HOM05D000483 ORTHO05D000158 1.7e-09 66.2 35 82.9
AT3G58450 Arabidopsis thaliana HOM05D000483 ORTHO05D000158 1.7e-09 66.2 35 82.9
BcaB02g07523 Brassica carinata HOM05D000483 ORTHO05D000158 1.7e-09 66.2 35 82.9
CARHR168840 Cardamine hirsuta HOM05D000483 ORTHO05D000158 1.7e-09 66.2 35 82.9
Thhalv10006473m.g Eutrema salsugineum HOM05D000483 ORTHO05D000158 1.7e-09 66.2 35 82.9
Carub.0005s2519 Capsella rubella HOM05D000483 ORTHO05D000158 2.2e-09 65.9 35 82.9
A09p51020 Brassica napus HOM05D000483 ORTHO05D000158 2.9e-09 65.5 52 63.5
C08p33840 Brassica napus HOM05D000483 ORTHO05D000158 2.9e-09 65.5 52 63.5
BolC8t50982H Brassica oleracea HOM05D000483 ORTHO05D000158 2.9e-09 65.5 52 63.5
BraA09t40547Z Brassica rapa HOM05D000483 ORTHO05D000158 2.9e-09 65.5 52 63.5
arahy.Tifrunner.gnm1.ann1.PSWV5K Arachis hypogaea HOM05D000483 ORTHO05D000158 4.9e-09 64.7 92 39.1
QL07p025852 Quercus lobata HOM05D000483 ORTHO05D000158 6.4e-09 64.3 35 82.9
GSVIVG01022496001 Vitis vinifera HOM05D000483 ORTHO05D000158 1.4e-08 63.2 35 77.1
TWI74G0894 Tripterygium wilfordii HOM05D000483 ORTHO05D000158 1.9e-08 62.8 42 69.0
Sp5g04430 Schrenkiella parvula HOM05D000483 ORTHO05D000158 2.4e-08 62.4 35 77.1
ECA248G2049 Erigeron canadensis HOM05D000483 ORTHO05D000158 4.1e-08 61.6 34 76.5
Prupe.7G087400 Prunus persica HOM05D000483 ORTHO05D000158 4.1e-08 61.6 35 74.3
PGSC0003DMG401033888 Solanum tuberosum HOM05D000483 ORTHO05D000158 4.1e-08 61.6 37 70.3
Aa31LG10G13010 Aethionema arabicum HOM05D000483 ORTHO05D000158 5.4e-08 61.2 35 74.3
Aqoxy1G00570 Aquilegia oxysepala HOM05D000483 ORTHO05D000158 5.4e-08 61.2 47 61.7
arahy.Tifrunner.gnm1.ann1.IE6UM0 Arachis hypogaea HOM05D000483 ORTHO05D000158 5.4e-08 61.2 95 38.9
Eucgr.K01888 Eucalyptus grandis HOM05D000483 ORTHO05D000158 5.4e-08 61.2 37 73.0
Lalb_Chr04g0252911 Lupinus albus HOM05D000483 ORTHO05D000158 5.4e-08 61.2 73 50.7
Cc06_g07090 Coffea canephora HOM05D000483 ORTHO05D000158 9.2e-08 60.5 89 42.7
Lsat_1_v5_gn_1_56421 Lactuca sativa HOM05D000483 ORTHO05D000158 9.2e-08 60.5 37 70.3
Lalb_Chr02g0153971 Lupinus albus HOM05D000483 ORTHO05D000158 9.2e-08 60.5 46 60.9
THA.LOC104802796 Tarenaya hassleriana HOM05D000483 ORTHO05D000158 9.2e-08 60.5 35 71.4
Ciclev10012835m.g Citrus clementina HOM05D000483 ORTHO05D000158 1.6e-07 59.7 46 63.0
Manes.08G038600 Manihot esculenta HOM05D000483 ORTHO05D000158 2.1e-07 59.3 37 67.6
Oeu020200.1 Olea europaea HOM05D000483 ORTHO05D000158 2.1e-07 59.3 34 70.6
Prupe.7G087200 Prunus persica HOM05D000483 ORTHO05D000158 2.1e-07 59.3 34 73.5
TAR623G0227 Trochodendron aralioides HOM05D000483 ORTHO05D000158 2.1e-07 59.3 35 74.3
AL3G23520 Arabidopsis lyrata HOM05D000483 ORTHO05D000158 2.7e-07 58.9 34 76.5
Ciclev10012833m.g Citrus clementina HOM05D000483 ORTHO05D000158 2.7e-07 58.9 35 71.4
RcHm_v2.0_Chr3g0477711 Rosa chinensis HOM05D000483 ORTHO05D000158 2.7e-07 58.9 35 71.4
FAN05G2567 Fragaria x ananassa HOM05D000483 ORTHO05D000158 3.5e-07 58.5 35 68.6
FAN05G3320 Fragaria x ananassa HOM05D000483 ORTHO05D000158 3.5e-07 58.5 35 68.6
Lj2A419T33 Lonicera japonica HOM05D000483 ORTHO05D000158 3.5e-07 58.5 34 73.5
Prupe.7G087300 Prunus persica HOM05D000483 ORTHO05D000158 3.5e-07 58.5 35 71.4
PGR142G2775 Punica granatum HOM05D000483 ORTHO05D000158 3.5e-07 58.5 37 64.9
Ah.12g059530 Amaranthus hybridus HOM05D000483 ORTHO05D000158 4.6e-07 58.2 35 65.7
BcaB04g18668 Brassica carinata HOM05D000483 ORTHO05D000158 4.6e-07 58.2 34 73.5
BcaC01g04072 Brassica carinata HOM05D000483 ORTHO05D000158 4.6e-07 58.2 34 73.5
A03p37350 Brassica napus HOM05D000483 ORTHO05D000158 4.6e-07 58.2 34 73.5
C03p45350 Brassica napus HOM05D000483 ORTHO05D000158 4.6e-07 58.2 34 73.5
BolC3t16801H Brassica oleracea HOM05D000483 ORTHO05D000158 4.6e-07 58.2 34 73.5
BraA03t12896Z Brassica rapa HOM05D000483 ORTHO05D000158 4.6e-07 58.2 34 73.5
FAN02G0201 Fragaria x ananassa HOM05D000483 ORTHO05D000158 4.6e-07 58.2 35 68.6
MBI11_g25052_MAGBIO Magnolia biondii HOM05D000483 ORTHO05D000158 4.6e-07 58.2 35 68.6
Nn2g14449 Nelumbo nucifera HOM05D000483 ORTHO05D000158 4.6e-07 58.2 34 67.6
PSO384G3795 Papaver somniferum HOM05D000483 ORTHO05D000158 4.6e-07 58.2 34 70.6
Cfa020103 Carpinus fangiana HOM05D000483 ORTHO05D000158 6.0e-07 57.8 35 71.4
FvH4_6g21250 Fragaria vesca HOM05D000483 ORTHO05D000158 6.0e-07 57.8 35 65.7
HanXRQChr01g0026251 Helianthus annuus HOM05D000483 ORTHO05D000158 6.0e-07 57.8 34 70.6
PSO339G3216 Papaver somniferum HOM05D000483 ORTHO05D000158 6.0e-07 57.8 35 65.7
Carub.0003s1125 Capsella rubella HOM05D000483 ORTHO05D000158 7.8e-07 57.4 34 73.5
CANSAT64G0658 Cannabis sativa HOM05D000483 ORTHO05D000158 1.0e-06 57.0 41 61.0
Cc06_g07100 Coffea canephora HOM05D000483 ORTHO05D000158 1.0e-06 57.0 34 67.6
BcaB04g21110 Brassica carinata HOM05D000483 ORTHO05D000158 1.3e-06 56.6 34 70.6
BcaB06g25557 Brassica carinata HOM05D000483 ORTHO05D000158 1.3e-06 56.6 34 70.6
CiPaw.09G025300 Carya illinoinensis HOM05D000483 ORTHO05D000158 1.3e-06 56.6 35 74.3
Haze_20088 Corylus avellana HOM05D000483 ORTHO05D000158 1.3e-06 56.6 41 58.5
Dinv25090 Davidia involucrata HOM05D000483 ORTHO05D000158 1.3e-06 56.6 34 70.6
VMungo0720G1243 Vigna mungo HOM05D000483 ORTHO05D000158 1.3e-06 56.6 35 71.4
EL10Ac5g11784 Beta vulgaris HOM05D000483 ORTHO05D000158 1.7e-06 56.2 37 59.5
Lalb_Chr02g0153921 Lupinus albus HOM05D000483 ORTHO05D000158 1.7e-06 56.2 35 68.6
Peaxi162Scf00425g00088 Petunia axillaris HOM05D000483 ORTHO05D000158 1.7e-06 56.2 37 62.2
Peaxi162Scf00645g00057 Petunia axillaris HOM05D000483 ORTHO05D000158 1.7e-06 56.2 37 62.2
Atru.chr8.1249 Acer truncatum HOM05D000483 ORTHO05D000158 2.3e-06 55.8 35 68.6
AT3G11930 Arabidopsis thaliana HOM05D000483 ORTHO05D000158 2.3e-06 55.8 34 70.6
A05p37450 Brassica napus HOM05D000483 ORTHO05D000158 2.3e-06 55.8 46 54.3
BraA05t22543Z Brassica rapa HOM05D000483 ORTHO05D000158 2.3e-06 55.8 46 54.3
CARHR086460 Cardamine hirsuta HOM05D000483 ORTHO05D000158 2.3e-06 55.8 41 61.0
CARHR086470 Cardamine hirsuta HOM05D000483 ORTHO05D000158 2.3e-06 55.8 38 65.8
Ciclev10013408m.g Citrus clementina HOM05D000483 ORTHO05D000158 2.3e-06 55.8 37 62.2
FAN14G1387 Fragaria x ananassa HOM05D000483 ORTHO05D000158 2.3e-06 55.8 35 62.9
HanXRQChr01g0026261 Helianthus annuus HOM05D000483 ORTHO05D000158 2.3e-06 55.8 34 67.6
Sc22g0003000 Simmondsia chinensis HOM05D000483 ORTHO05D000158 2.3e-06 55.8 35 71.4
Phvul.007G264400 Phaseolus vulgaris HOM05D000483 ORTHO05D000158 3.0e-06 55.5 35 68.6
Potri.006G198200 Populus trichocarpa HOM05D000483 ORTHO05D000158 3.0e-06 55.5 35 65.7
Solyc01g057000.3 Solanum lycopersicum HOM05D000483 ORTHO05D000158 3.0e-06 55.5 37 56.8
Sopen01g021170 Solanum pennellii HOM05D000483 ORTHO05D000158 3.0e-06 55.5 37 56.8
Aa31LG3G5610 Aethionema arabicum HOM05D000483 ORTHO05D000158 3.9e-06 55.1 34 67.6
BcaC09g48186 Brassica carinata HOM05D000483 ORTHO05D000158 3.9e-06 55.1 34 67.6
BolC1t05280H Brassica oleracea HOM05D000483 ORTHO05D000158 3.9e-06 55.1 34 67.6
BraA01t04151Z Brassica rapa HOM05D000483 ORTHO05D000158 3.9e-06 55.1 34 67.6
AUR62036292 Chenopodium quinoa HOM05D000483 ORTHO05D000158 3.9e-06 55.1 37 56.8
Thhalv10021565m.g Eutrema salsugineum HOM05D000483 ORTHO05D000158 3.9e-06 55.1 34 67.6
Nitab4.5_0004925g0010 Nicotiana tabacum HOM05D000483 ORTHO05D000158 3.9e-06 55.1 34 64.7
Nitab4.5_0006161g0020 Nicotiana tabacum HOM05D000483 ORTHO05D000158 3.9e-06 55.1 34 64.7
Thecc.05G181800 Theobroma cacao HOM05D000483 ORTHO05D000158 3.9e-06 55.1 35 62.9
CAN.G303.37 Capsicum annuum HOM05D000483 ORTHO05D000158 5.1e-06 54.7 37 59.5
DCAR_020673 Daucus carota HOM05D000483 ORTHO05D000158 5.1e-06 54.7 34 64.7
Cc10_g15780 Coffea canephora HOM05D000483 ORTHO05D000158 6.6e-06 54.3 35 71.4
Duzib093G1885 Durio zibethinus HOM05D000483 ORTHO05D000158 6.6e-06 54.3 34 64.7
FAN02G2029 Fragaria x ananassa HOM05D000483 ORTHO05D000158 6.6e-06 54.3 35 68.6
FAN05G2191 Fragaria x ananassa HOM05D000483 ORTHO05D000158 6.6e-06 54.3 35 68.6
FAN05G2898 Fragaria x ananassa HOM05D000483 ORTHO05D000158 6.6e-06 54.3 35 68.6
Oeu045009.2 Olea europaea HOM05D000483 ORTHO05D000158 6.6e-06 54.3 34 61.8
Sp3g10140 Schrenkiella parvula HOM05D000483 ORTHO05D000158 6.6e-06 54.3 34 64.7
Thecc.05G181900 Theobroma cacao HOM05D000483 ORTHO05D000158 6.6e-06 54.3 53 49.1
Ca_18102_v3 Cicer arietinum L. HOM05D000483 ORTHO05D000158 8.6e-06 53.9 35 62.9
Hma1.2p1_1754F.1_g300900 Hydrangea macrophylla HOM05D000483 ORTHO05D000158 8.6e-06 53.9 44 61.4


User provided reference genes

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