Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0693G013 Amborella trichopoda HOM05D001445 ORTHO05D001261 3.6e-97 358.2 180 100.0
Thecc.09G068900 Theobroma cacao HOM05D001445 ORTHO05D003404 1.4e-11 73.9 106 39.6
CDE07G1929 Ceratophyllum demersum HOM05D001445 ORTHO05D001261 9.8e-10 67.8 100 36.0
COL.COLO4_17127 Corchorus olitorius HOM05D001445 ORTHO05D001261 1.3e-09 67.4 100 36.0
CDE06G1635 Ceratophyllum demersum HOM05D001445 ORTHO05D001261 2.2e-09 66.6 101 36.6
Sabra14G0032000 Salix brachista HOM05D001445 ORTHO05D001261 3.7e-09 65.9 102 35.3
TAR375G0055 Trochodendron aralioides HOM05D001445 ORTHO05D001261 6.4e-09 65.1 167 28.7
Nn1g00654 Nelumbo nucifera HOM05D001445 ORTHO05D001261 8.3e-09 64.7 114 31.6
MSTRG.4961 Avicennia marina HOM05D001445 ORTHO05D001261 1.4e-08 63.9 105 36.2
CANSAT56G1763 Cannabis sativa HOM05D001445 ORTHO05D001261 1.9e-08 63.5 82 39.0
Nitab4.5_0005034g0010 Nicotiana tabacum HOM05D001445 ORTHO05D001261 1.9e-08 63.5 100 35.0
QL04p026153 Quercus lobata HOM05D001445 ORTHO05D001261 2.4e-08 63.2 89 40.4
TWI59G0004 Tripterygium wilfordii HOM05D001445 ORTHO05D001261 2.4e-08 63.2 89 36.0
COL.COLO4_17126 Corchorus olitorius HOM05D001445 ORTHO05D001261 3.2e-08 62.8 100 34.0
Cfa011022 Carpinus fangiana HOM05D001445 ORTHO05D001261 4.1e-08 62.4 98 35.7
MELO3C022457.2 Cucumis melo HOM05D001445 ORTHO05D001261 5.4e-08 62.0 90 36.7
TWI14G0207 Tripterygium wilfordii HOM05D001445 ORTHO05D001261 9.2e-08 61.2 82 40.2
TWI34G1970 Tripterygium wilfordii HOM05D001445 ORTHO05D003404 9.2e-08 61.2 127 29.1
CAN.G756.16 Capsicum annuum HOM05D001445 ORTHO05D001261 1.2e-07 60.8 84 36.9
Haze_02903 Corylus avellana HOM05D001445 ORTHO05D001261 1.2e-07 60.8 89 38.2
Eucgr.E00321 Eucalyptus grandis HOM05D001445 ORTHO05D001261 1.2e-07 60.8 113 35.4
Potri.003G086500 Populus trichocarpa HOM05D001445 ORTHO05D001261 1.2e-07 60.8 165 28.5
Ciclev10023652m.g Citrus clementina HOM05D001445 ORTHO05D001261 1.6e-07 60.5 84 41.7
QL12p007390 Quercus lobata HOM05D001445 ORTHO05D001261 2.7e-07 59.7 176 30.1
Actinidia30953 Actinidia chinensis HOM05D001445 ORTHO05D001261 3.5e-07 59.3 90 38.9
Potri.014G044100 Populus trichocarpa HOM05D001445 ORTHO05D001261 3.5e-07 59.3 89 37.1
PGSC0003DMG400001717 Solanum tuberosum HOM05D001445 ORTHO05D001261 3.5e-07 59.3 89 33.7
CANSAT56G2517 Cannabis sativa HOM05D001445 ORTHO05D003404 6.0e-07 58.5 81 37.0
CiPaw.13G022000 Carya illinoinensis HOM05D001445 ORTHO05D001261 6.0e-07 58.5 89 36.0
ClCG06G000840 Citrullus lanatus HOM05D001445 ORTHO05D001261 6.0e-07 58.5 90 35.6
Cc02_g25640 Coffea canephora HOM05D001445 ORTHO05D001261 6.0e-07 58.5 94 33.0
MELO3C022456.2 Cucumis melo HOM05D001445 ORTHO05D001261 6.0e-07 58.5 89 33.7
MBI04_g03340_MAGBIO Magnolia biondii HOM05D001445 ORTHO05D001261 6.0e-07 58.5 97 32.0
TAR629G3049 Trochodendron aralioides HOM05D001445 ORTHO05D001261 6.0e-07 58.5 86 37.2
Prupe.2G115600 Prunus persica HOM05D001445 ORTHO05D001261 7.8e-07 58.2 89 39.3
TAR375G0630 Trochodendron aralioides HOM05D001445 ORTHO05D001261 7.8e-07 58.2 173 28.3
Actinidia19773 Actinidia chinensis HOM05D003556 ORTHO05D003404 1.0e-06 57.8 86 33.7
Nn3g21538 Nelumbo nucifera HOM05D003556 ORTHO05D003404 1.0e-06 57.8 141 29.1
RcHm_v2.0_Chr1g0344051 Rosa chinensis HOM05D001445 ORTHO05D001261 1.0e-06 57.8 100 34.0
SGA_v2.0_scaffold52G19268 Striga asiatica HOM05D001445 ORTHO05D001261 1.0e-06 57.8 84 38.1
Actinidia21612 Actinidia chinensis HOM05D001445 ORTHO05D001261 1.3e-06 57.4 89 36.0
CSS0012427 Camellia sinensis var. sinensis HOM05D001445 ORTHO05D001261 1.3e-06 57.4 105 32.4
CSS0025537 Camellia sinensis var. sinensis HOM05D003556 ORTHO05D003404 1.3e-06 57.4 112 30.4
CSS0050483 Camellia sinensis var. sinensis HOM05D003556 ORTHO05D003404 1.3e-06 57.4 112 30.4
Dinv28905 Davidia involucrata HOM05D001445 ORTHO05D001261 1.3e-06 57.4 113 34.5
Duzib133G0634 Durio zibethinus HOM05D001445 ORTHO05D001261 1.3e-06 57.4 85 37.6
Solyc01g088590.5 Solanum lycopersicum HOM05D001445 ORTHO05D001261 1.3e-06 57.4 100 31.0
TAR375G1152 Trochodendron aralioides HOM05D001445 ORTHO05D001261 1.3e-06 57.4 92 33.7
ClCG06G000850 Citrullus lanatus HOM05D001445 ORTHO05D001261 1.7e-06 57.0 128 31.2
Gohir.D08G161800 Gossypium hirsutum HOM05D001445 ORTHO05D001261 1.7e-06 57.0 85 40.0
Gorai.004G168200 Gossypium raimondii HOM05D001445 ORTHO05D001261 1.7e-06 57.0 85 40.0
Lsat_1_v5_gn_7_11841 Lactuca sativa HOM05D001445 ORTHO05D001261 1.7e-06 57.0 96 34.4
Oeu024389.1 Olea europaea HOM05D001445 ORTHO05D001261 1.7e-06 57.0 100 32.0
SalBow5G1724 Salvia bowleyana HOM05D001445 ORTHO05D001261 1.7e-06 57.0 83 36.1
CiPaw.11G087100 Carya illinoinensis HOM05D001445 ORTHO05D001261 2.3e-06 56.6 93 34.4
ECA236G4359 Erigeron canadensis HOM05D001445 ORTHO05D001261 2.3e-06 56.6 95 33.7
Eucgr.D01182 Eucalyptus grandis HOM05D001445 ORTHO05D001261 2.3e-06 56.6 89 38.2
CsaV3_6G006710 Cucumis sativus L. HOM05D005488 ORTHO05D001261 3.0e-06 56.2 83 34.9
Oeu018160.1 Olea europaea HOM05D001445 ORTHO05D001261 3.0e-06 56.2 91 33.0
RcHm_v2.0_Chr1g0344001 Rosa chinensis HOM05D001445 ORTHO05D001261 3.0e-06 56.2 90 36.7
RcHm_v2.0_Chr1g0344031 Rosa chinensis HOM05D001445 ORTHO05D001261 3.0e-06 56.2 90 35.6
Sed0021869 Sechium edule HOM05D001445 ORTHO05D001261 3.0e-06 56.2 103 35.0
Sopen01g035440 Solanum pennellii HOM05D001445 ORTHO05D001261 3.0e-06 56.2 100 31.0
Ciclev10002648m.g Citrus clementina HOM05D003556 ORTHO05D003404 3.9e-06 55.8 102 32.4
MELO3C006266.2 Cucumis melo HOM05D001445 ORTHO05D001261 3.9e-06 55.8 101 32.7
PGSC0003DMG400001728 Solanum tuberosum HOM05D001445 ORTHO05D001261 3.9e-06 55.8 100 32.0
Thecc.01G402600 Theobroma cacao HOM05D001445 ORTHO05D001261 3.9e-06 55.8 82 37.8
Aa31LG10G420 Aethionema arabicum HOM05D003556 ORTHO05D003404 5.0e-06 55.5 105 28.6
Migut.N01714 Erythranthe guttata HOM05D001445 ORTHO05D001261 5.0e-06 55.5 98 31.6
Gohir.D03G169433 Gossypium hirsutum HOM05D001445 ORTHO05D001261 5.0e-06 55.5 100 32.0
Gorai.003G179700 Gossypium raimondii HOM05D001445 ORTHO05D001261 5.0e-06 55.5 100 32.0
Thecc.03G235500 Theobroma cacao HOM05D001445 ORTHO05D001261 5.0e-06 55.5 100 35.0
COL.COLO4_17125 Corchorus olitorius HOM05D001445 ORTHO05D001261 6.6e-06 55.1 109 29.4
Gohir.A08G140800 Gossypium hirsutum HOM05D001445 ORTHO05D001261 6.6e-06 55.1 85 40.0
Manes.15G171900 Manihot esculenta HOM05D001445 ORTHO05D001261 6.6e-06 55.1 79 36.7
Nitab4.5_0004088g0040 Nicotiana tabacum HOM05D001445 ORTHO05D001261 6.6e-06 55.1 86 33.7
Peaxi162Scf00745g00003 Petunia axillaris HOM05D001445 ORTHO05D001261 6.6e-06 55.1 86 32.6
EL10Ac1g00256 Beta vulgaris HOM05D001445 ORTHO05D001261 8.6e-06 54.7 99 33.3
HanXRQChr04g0115481 Helianthus annuus HOM05D001445 ORTHO05D001261 8.6e-06 54.7 91 34.1
Oeu024392.1 Olea europaea HOM05D001445 ORTHO05D001261 8.6e-06 54.7 89 34.8
SGA_v2.0_scaffold77G25252 Striga asiatica HOM05D001445 ORTHO05D001261 8.6e-06 54.7 102 29.4


User provided reference genes

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