Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0691G295 Amborella trichopoda HOM05D000049 ORTHO05D008785 9.3e-20 99.4 55 100.0
CiPaw.06G170000 Carya illinoinensis HOM05D000049 ORTHO05D008785 5.3e-15 83.6 55 80.0
Cpa.g.sc106.84 Carica papaya HOM05D000049 ORTHO05D008785 6.9e-15 83.2 55 81.8
Gohir.D02G207500 Gossypium hirsutum HOM05D000049 ORTHO05D008785 6.9e-15 83.2 52 86.5
PSO210G6109 Papaver somniferum HOM05D000049 ORTHO05D008785 6.9e-15 83.2 55 81.8
Duzib248G1051 Durio zibethinus HOM05D000049 ORTHO05D008785 9.0e-15 82.8 55 81.8
Thecc.02G106900 Theobroma cacao HOM05D000049 ORTHO05D008785 9.0e-15 82.8 55 81.8
Gorai.005G235400 Gossypium raimondii HOM05D000049 ORTHO05D008785 1.5e-14 82.0 52 86.5
Duzib132G0396 Durio zibethinus HOM05D000049 ORTHO05D008785 2.0e-14 81.6 52 84.6
Gohir.A03G186700 Gossypium hirsutum HOM05D000049 ORTHO05D008785 2.0e-14 81.6 52 84.6
Phvul.007G038900 Phaseolus vulgaris HOM05D000049 ORTHO05D008785 2.0e-14 81.6 55 80.0
QL11p033983 Quercus lobata HOM05D000049 ORTHO05D008785 2.0e-14 81.6 54 77.8
VMungo0720G1000 Vigna mungo HOM05D000049 ORTHO05D008785 2.0e-14 81.6 55 80.0
Cc02_g19180 Coffea canephora HOM05D000049 ORTHO05D008785 3.4e-14 80.9 55 80.0
Haze_10161 Corylus avellana HOM05D000049 ORTHO05D008785 3.4e-14 80.9 55 78.2
Cfa004569 Carpinus fangiana HOM05D000049 ORTHO05D008785 4.5e-14 80.5 55 78.2
Glyma.20G129600 Glycine max HOM05D000049 ORTHO05D008785 4.5e-14 80.5 55 80.0
Hund06332 Selenicereus undatus HOM05D000049 ORTHO05D008785 4.5e-14 80.5 55 78.2
ECA240G2980 Erigeron canadensis HOM05D000049 ORTHO05D000027 5.8e-14 80.1 52 80.8
Glyma.10G263000 Glycine max HOM05D000049 ORTHO05D008785 5.8e-14 80.1 55 78.2
Glyma.20G127500 Glycine max HOM05D000049 ORTHO05D008785 5.8e-14 80.1 55 78.2
Ah.01g018130 Amaranthus hybridus HOM05D000049 ORTHO05D008785 7.6e-14 79.7 55 78.2
Eucgr.H03224 Eucalyptus grandis HOM05D000049 ORTHO05D008785 7.6e-14 79.7 53 79.2
Solyc01g107660.3 Solanum lycopersicum HOM05D000049 ORTHO05D008785 7.6e-14 79.7 55 78.2
EL10Ac9g22295 Beta vulgaris HOM05D000049 ORTHO05D008785 1.0e-13 79.3 55 76.4
CANSAT25G0973 Cannabis sativa HOM05D000049 ORTHO05D008785 1.0e-13 79.3 55 76.4
CAN.G1231.12 Capsicum annuum HOM05D000049 ORTHO05D008785 1.0e-13 79.3 55 78.2
HanXRQChr03g0070281 Helianthus annuus HOM05D000049 ORTHO05D008785 1.0e-13 79.3 55 76.4
Hma1.2p1_0796F.1_g219130 Hydrangea macrophylla HOM05D000049 ORTHO05D008785 1.0e-13 79.3 55 76.4
SalBow3G3686 Salvia bowleyana HOM05D000049 ORTHO05D008785 1.0e-13 79.3 55 78.2
TWI31G0015 Tripterygium wilfordii HOM05D000049 ORTHO05D008785 1.0e-13 79.3 55 76.4
CiPaw.05G010600 Carya illinoinensis HOM05D000049 ORTHO05D008785 1.3e-13 79.0 55 74.5
AUR62010281 Chenopodium quinoa HOM05D000049 ORTHO05D008785 1.3e-13 79.0 55 74.5
AUR62039109 Chenopodium quinoa HOM05D000049 ORTHO05D008785 1.3e-13 79.0 55 74.5
PGSC0003DMG400025866 Solanum tuberosum HOM05D000049 ORTHO05D008785 1.3e-13 79.0 55 78.2
CDE02G2484 Ceratophyllum demersum HOM05D000049 ORTHO05D008785 1.7e-13 78.6 55 78.2
Manes.02G137400 Manihot esculenta HOM05D000049 ORTHO05D008785 1.7e-13 78.6 55 76.4
Nn1g04714 Nelumbo nucifera HOM05D000049 ORTHO05D008785 1.7e-13 78.6 52 80.8
TPR.G13867 Trifolium pratense HOM05D000049 ORTHO05D008785 1.7e-13 78.6 55 76.4
GSVIVG01003167001 Vitis vinifera HOM05D000049 ORTHO05D008785 1.7e-13 78.6 55 76.4
Atru.chr5.2581 Acer truncatum HOM05D000049 ORTHO05D008785 2.2e-13 78.2 55 76.4
Aqoxy5G01153 Aquilegia oxysepala HOM05D000049 ORTHO05D008785 2.2e-13 78.2 55 76.4
Ciclev10029534m.g Citrus clementina HOM05D000049 ORTHO05D008785 2.2e-13 78.2 55 76.4
Lj5g0006015 Lotus japonicus HOM05D000049 ORTHO05D008785 2.2e-13 78.2 55 72.7
Lalb_Chr02g0145351 Lupinus albus HOM05D000049 ORTHO05D008785 2.2e-13 78.2 55 74.5
PGR042G1228 Punica granatum HOM05D000049 ORTHO05D008785 2.2e-13 78.2 52 78.8
arahy.Tifrunner.gnm1.ann1.MU25MQ Arachis hypogaea HOM05D000049 ORTHO05D008785 2.9e-13 77.8 55 74.5
Oeu018599.1 Olea europaea HOM05D000049 ORTHO05D008785 2.9e-13 77.8 55 74.5
Sc08g0001450 Simmondsia chinensis HOM05D000049 ORTHO05D008785 2.9e-13 77.8 55 74.5
SGA_v2.0_scaffold393G50708 Striga asiatica HOM05D000049 ORTHO05D008785 2.9e-13 77.8 55 74.5
Actinidia27967 Actinidia chinensis HOM05D000049 ORTHO05D008785 3.8e-13 77.4 55 76.4
Thhalv10026482m.g Eutrema salsugineum HOM05D000049 ORTHO05D008785 3.8e-13 77.4 55 72.7
Aa31LG2G16660 Aethionema arabicum HOM05D000049 ORTHO05D008785 5.0e-13 77.0 55 72.7
AL7G17120 Arabidopsis lyrata HOM05D000049 ORTHO05D008785 5.0e-13 77.0 55 74.5
AT4G34190 Arabidopsis thaliana HOM05D000049 ORTHO05D008785 5.0e-13 77.0 55 74.5
PSO170G1282 Papaver somniferum HOM05D000049 ORTHO05D008785 5.0e-13 77.0 60 75.0
Psat6g219680 Pisum sativum HOM05D000049 ORTHO05D008785 5.0e-13 77.0 55 72.7
Sp7g31960 Schrenkiella parvula HOM05D000049 ORTHO05D008785 5.0e-13 77.0 55 70.9
BcaNung03801 Brassica carinata HOM05D000049 ORTHO05D008785 8.4e-13 76.3 55 72.7
A01p04250 Brassica napus HOM05D000049 ORTHO05D008785 8.4e-13 76.3 55 72.7
C01p04640 Brassica napus HOM05D000049 ORTHO05D008785 8.4e-13 76.3 55 72.7
BolC1t00447H Brassica oleracea HOM05D000049 ORTHO05D008785 8.4e-13 76.3 55 72.7
BraA01t00414Z Brassica rapa HOM05D000049 ORTHO05D008785 8.4e-13 76.3 55 72.7
Carub.0007s0619 Capsella rubella HOM05D000049 ORTHO05D008785 8.4e-13 76.3 55 69.1
Migut.B00381 Erythranthe guttata HOM05D000049 ORTHO05D008785 8.4e-13 76.3 52 78.8
Oeu010393.1 Olea europaea HOM05D000049 ORTHO05D008785 8.4e-13 76.3 55 72.7
CARHR242610 Cardamine hirsuta HOM05D000049 ORTHO05D008785 1.1e-12 75.9 55 72.7
Nitab4.5_0005392g0020 Nicotiana tabacum HOM05D000049 ORTHO05D008785 1.1e-12 75.9 55 72.7
DCAR_030806 Daucus carota HOM05D000049 ORTHO05D008785 1.4e-12 75.5 52 73.1
Peaxi162Scf00016g02238 Petunia axillaris HOM05D000049 ORTHO05D008785 1.4e-12 75.5 55 72.7
CANSAT25G0620 Cannabis sativa HOM05D000049 ORTHO05D008785 1.9e-12 75.1 51 76.5
MSTRG.5347 Avicennia marina HOM05D000049 ORTHO05D008785 2.5e-12 74.7 52 75.0
ClCG02G006290 Citrullus lanatus HOM05D000049 ORTHO05D008785 3.2e-12 74.3 55 70.9
CsaV3_7G008250 Cucumis sativus L. HOM05D000049 ORTHO05D008785 3.2e-12 74.3 55 70.9
RcHm_v2.0_Chr6g0255531 Rosa chinensis HOM05D000049 ORTHO05D008785 3.2e-12 74.3 55 72.7
Nitab4.5_0002815g0100 Nicotiana tabacum HOM05D000049 ORTHO05D008785 4.2e-12 73.9 55 70.9
CSS0023695 Camellia sinensis var. sinensis HOM05D000049 ORTHO05D008785 5.5e-12 73.6 55 70.9
Migut.N01171 Erythranthe guttata HOM05D000049 ORTHO05D008785 5.5e-12 73.6 55 74.5
FvH4_2g05321 Fragaria vesca HOM05D000049 ORTHO05D008785 5.5e-12 73.6 55 72.7
FAN20G0640 Fragaria x ananassa HOM05D000049 ORTHO05D008785 5.5e-12 73.6 55 72.7
Prupe.8G134100 Prunus persica HOM05D000049 ORTHO05D008785 5.5e-12 73.6 52 73.1
Sed0018040 Sechium edule HOM05D000049 ORTHO05D008785 5.5e-12 73.6 55 70.9
Potri.009G096800 Populus trichocarpa HOM05D000049 ORTHO05D008785 7.1e-12 73.2 55 67.3
Atru.chr11.1081 Acer truncatum HOM05D000049 ORTHO05D008785 9.3e-12 72.8 53 73.6
THA.LOC104819560 Tarenaya hassleriana HOM05D000049 ORTHO05D008785 9.3e-12 72.8 55 67.3
unitig_22.g6845 Utricularia gibba HOM05D000049 ORTHO05D008785 1.2e-11 72.4 53 69.8
MD05G1088100 Malus domestica HOM05D000049 ORTHO05D008785 1.6e-11 72.0 52 73.1
TAR381G1170 Trochodendron aralioides HOM05D000049 ORTHO05D008785 1.6e-11 72.0 52 71.2
HPP92_004768 Vanilla planifolia HOM05D000049 ORTHO05D008785 2.1e-11 71.6 55 67.3
arahy.Tifrunner.gnm1.ann1.KJA62A Arachis hypogaea HOM05D000049 ORTHO05D008785 2.7e-11 71.2 54 68.5
Potri.001G301100 Populus trichocarpa HOM05D000049 ORTHO05D008785 2.7e-11 71.2 55 69.1
Sabra16G0189300 Salix brachista HOM05D000049 ORTHO05D008785 2.7e-11 71.2 52 71.2
SEGI_21574 Sequoiadendron giganteum HOM05D000049 ORTHO05D008785 7.9e-11 69.7 55 63.6
THA.LOC104807247 Tarenaya hassleriana HOM05D000049 ORTHO05D008785 1.0e-10 69.3 55 65.5
Dinv42184 Davidia involucrata HOM05D000049 ORTHO05D008785 1.3e-10 68.9 46 78.3
Zm00001eb048670 Zea mays HOM05D000049 ORTHO05D008785 1.9e-09 65.1 55 58.2
Mapoly0006s0145 Marchantia polymorpha HOM05D000049 ORTHO05D008785 7.4e-09 63.2 55 65.5
CSS0021501 Camellia sinensis var. sinensis HOM05D000049 ORTHO05D008785 1.6e-08 62.0 40 77.5
CSS0024818 Camellia sinensis var. sinensis HOM05D000049 ORTHO05D008785 1.6e-08 62.0 40 77.5
MELO3C018482.2 Cucumis melo HOM05D000049 ORTHO05D000027 8.2e-08 59.7 44 70.5
FAN24G0707 Fragaria x ananassa HOM05D000049 ORTHO05D008785 8.2e-08 59.7 46 65.2
Medtr1g107490 Medicago truncatula HOM05D000049 ORTHO05D008785 8.2e-08 59.7 41 70.7
Os11g0621400 Oryza sativa ssp. japonica HOM05D000049 ORTHO05D008785 8.2e-08 59.7 55 52.7
Hund00143 Selenicereus undatus HOM05D000049 ORTHO05D008785 8.2e-08 59.7 39 74.4
FAN15G1433 Fragaria x ananassa HOM05D000049 ORTHO05D008785 1.1e-07 59.3 46 63.0
Pp3c1_21810 Physcomitrium patens HOM05D000049 ORTHO05D008785 5.9e-06 53.5 55 50.9


User provided reference genes

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