Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0691G291 Amborella trichopoda HOM05D006376 ORTHO05D008046 4.4e-144 514.6 263 100.0
MBI16_g21168_MAGBIO Magnolia biondii HOM05D006376 ORTHO05D008046 2.1e-77 293.1 225 66.7
Aqoxy3G03987 Aquilegia oxysepala HOM05D006376 ORTHO05D008046 1.2e-75 287.3 224 63.4
Nn3g18015 Nelumbo nucifera HOM05D006376 ORTHO05D008046 3.4e-75 285.8 205 71.7
TAR629G1456 Trochodendron aralioides HOM05D006376 ORTHO05D008046 7.5e-75 284.6 213 70.0
VMungo0251G1463 Vigna mungo HOM05D006376 ORTHO05D008046 6.3e-74 281.6 204 68.6
GSVIVG01008377001 Vitis vinifera HOM05D006376 ORTHO05D008046 7.0e-73 278.1 204 66.2
Zm00001eb334810 Zea mays HOM05D006376 ORTHO05D008046 7.0e-73 278.1 185 71.4
Lj4g0006852 Lotus japonicus HOM05D006376 ORTHO05D008046 9.1e-73 277.7 205 69.8
MELO3C017340.2 Cucumis melo HOM05D006376 ORTHO05D008046 1.2e-72 277.3 196 68.9
Os01g0120500 Oryza sativa ssp. japonica HOM05D006376 ORTHO05D008046 1.6e-72 276.9 175 74.3
arahy.Tifrunner.gnm1.ann1.5Y9SE5 Arachis hypogaea HOM05D006376 ORTHO05D008046 2.0e-72 276.6 230 63.5
CsaV3_1G004140 Cucumis sativus L. HOM05D006376 ORTHO05D008046 2.0e-72 276.6 199 68.3
AL1G30420 Arabidopsis lyrata HOM05D006376 ORTHO05D008046 2.7e-72 276.2 175 74.3
Carub.0001s1773 Capsella rubella HOM05D006376 ORTHO05D008046 3.5e-72 275.8 175 74.3
CANSAT21G0790 Cannabis sativa HOM05D006376 ORTHO05D008046 4.5e-72 275.4 200 65.5
CARHR018640 Cardamine hirsuta HOM05D006376 ORTHO05D008046 4.5e-72 275.4 178 73.0
Glyma.05G243300 Glycine max HOM05D006376 ORTHO05D008046 4.5e-72 275.4 223 63.2
Hund02337 Selenicereus undatus HOM05D006376 ORTHO05D008046 5.9e-72 275.0 214 66.4
Cc04_g06670 Coffea canephora HOM05D006376 ORTHO05D008046 1.3e-71 273.9 209 64.1
Phvul.002G327000 Phaseolus vulgaris HOM05D006376 ORTHO05D008046 1.7e-71 273.5 204 66.2
Glyma.08G051100 Glycine max HOM05D006376 ORTHO05D008046 2.3e-71 273.1 216 64.8
BraA08t34989Z Brassica rapa HOM05D000280 ORTHO05D004091 2.9e-71 272.7 178 72.5
CiPaw.15G138400 Carya illinoinensis HOM05D006376 ORTHO05D008046 2.9e-71 272.7 232 61.6
Thhalv10008687m.g Eutrema salsugineum HOM05D006376 ORTHO05D008046 3.8e-71 272.3 175 74.3
FvH4_5g16950 Fragaria vesca HOM05D006376 ORTHO05D008046 3.8e-71 272.3 197 67.5
FAN18G1549 Fragaria x ananassa HOM05D006376 ORTHO05D008046 3.8e-71 272.3 197 67.5
arahy.Tifrunner.gnm1.ann1.CZ5T9B Arachis hypogaea HOM05D006376 ORTHO05D008046 5.0e-71 271.9 225 62.7
A08p30580 Brassica napus HOM05D006376 ORTHO05D008046 5.0e-71 271.9 188 70.2
THA.LOC104813912 Tarenaya hassleriana HOM05D006376 ORTHO05D008046 5.0e-71 271.9 195 68.2
Lalb_Chr09g0330601 Lupinus albus HOM05D006376 ORTHO05D008046 6.5e-71 271.6 235 61.3
CiPaw.15G139000 Carya illinoinensis HOM05D006376 ORTHO05D008046 8.6e-71 271.2 207 65.2
C08p18330 Brassica napus HOM05D006376 ORTHO05D008046 1.1e-70 270.8 188 70.2
BolC8t49467H Brassica oleracea HOM05D006376 ORTHO05D008046 1.1e-70 270.8 188 70.2
Potri.012G052300 Populus trichocarpa HOM05D006376 ORTHO05D008046 1.1e-70 270.8 178 71.3
PGR083G0770 Punica granatum HOM05D006376 ORTHO05D008046 1.1e-70 270.8 227 58.6
AT1G18060 Arabidopsis thaliana HOM05D006376 ORTHO05D008046 1.5e-70 270.4 178 72.5
RcHm_v2.0_Chr7g0179071 Rosa chinensis HOM05D006376 ORTHO05D008046 1.9e-70 270.0 207 65.7
Medtr8g106690 Medicago truncatula HOM05D006376 ORTHO05D008046 2.5e-70 269.6 204 65.7
TPR.G12760 Trifolium pratense HOM05D006376 ORTHO05D008046 2.5e-70 269.6 220 60.9
FAN08G1323 Fragaria x ananassa HOM05D006376 ORTHO05D008046 3.2e-70 269.2 197 67.0
AUR62033755 Chenopodium quinoa HOM05D006376 ORTHO05D008046 5.5e-70 268.5 206 66.5
Manes.14G168100 Manihot esculenta HOM05D006376 ORTHO05D008046 5.5e-70 268.5 183 69.4
QL10p027316 Quercus lobata HOM05D006376 ORTHO05D008046 1.2e-69 267.3 230 58.3
Psat7g004120 Pisum sativum HOM05D006376 ORTHO05D008046 1.6e-69 266.9 175 72.0
Prupe.5G228200 Prunus persica HOM05D006376 ORTHO05D008046 1.6e-69 266.9 206 64.1
Oeu024338.1 Olea europaea HOM05D006376 ORTHO05D008046 2.1e-69 266.5 205 62.4
Dinv13549 Davidia involucrata HOM05D006376 ORTHO05D008046 2.8e-69 266.2 205 62.9
Sabra12G0035600 Salix brachista HOM05D006376 ORTHO05D008046 2.8e-69 266.2 183 68.9
Eucgr.B00851 Eucalyptus grandis HOM05D006376 ORTHO05D008046 3.6e-69 265.8 203 64.5
FAN04G0856 Fragaria x ananassa HOM05D006376 ORTHO05D008046 4.7e-69 265.4 197 66.0
AUR62029950 Chenopodium quinoa HOM05D006376 ORTHO05D008046 6.1e-69 265.0 205 65.4
Cpa.g.sc3.442 Carica papaya HOM05D006376 ORTHO05D008046 8.0e-69 264.6 202 63.9
Nitab4.5_0012340g0010 Nicotiana tabacum HOM05D006376 ORTHO05D008046 8.0e-69 264.6 214 63.6
CDE03G0312 Ceratophyllum demersum HOM05D006376 ORTHO05D008046 1.0e-68 264.2 229 60.3
COL.COLO4_37647 Corchorus olitorius HOM05D006376 ORTHO05D008046 1.0e-68 264.2 178 69.7
Thecc.03G047000 Theobroma cacao HOM05D006376 ORTHO05D008046 1.0e-68 264.2 178 69.1
FAN13G1861 Fragaria x ananassa HOM05D006376 ORTHO05D008046 1.8e-68 263.5 197 65.0
CAN.G423.18 Capsicum annuum HOM05D006376 ORTHO05D008046 2.3e-68 263.1 182 71.4
Cfa019704 Carpinus fangiana HOM05D006376 ORTHO05D008046 2.3e-68 263.1 177 70.6
Gohir.D12G268200 Gossypium hirsutum HOM05D006376 ORTHO05D008046 4.0e-68 262.3 203 63.1
Haze_18787 Corylus avellana HOM05D006376 ORTHO05D008046 5.2e-68 261.9 175 70.3
Gorai.008G288200 Gossypium raimondii HOM05D006376 ORTHO05D008046 5.2e-68 261.9 203 63.1
Lj9A422G67 Lonicera japonica HOM05D006376 ORTHO05D008046 5.2e-68 261.9 207 61.8
Nitab4.5_0001194g0140 Nicotiana tabacum HOM05D006376 ORTHO05D008046 6.8e-68 261.5 182 70.9
Ciclev10009207m.g Citrus clementina HOM05D006376 ORTHO05D008046 1.2e-67 260.8 202 62.4
PSO717G0073 Papaver somniferum HOM05D006376 ORTHO05D008046 1.2e-67 260.8 223 59.6
TWI81G0521 Tripterygium wilfordii HOM05D006376 ORTHO05D008046 1.2e-67 260.8 181 69.1
PSO675G4918 Papaver somniferum HOM05D006376 ORTHO05D008046 1.5e-67 260.4 223 59.6
SGA_v2.0_scaffold171G38935 Striga asiatica HOM05D006376 ORTHO05D008046 2.6e-67 259.6 210 63.3
Sc04g0003270 Simmondsia chinensis HOM05D006376 ORTHO05D008046 4.4e-67 258.8 175 69.7
Atru.chr9.942 Acer truncatum HOM05D006376 ORTHO05D008046 5.7e-67 258.5 216 62.5
Hma1.2p1_0660F.1_g197700 Hydrangea macrophylla HOM05D006376 ORTHO05D008046 9.8e-67 257.7 203 64.0
Rhsim07G0069700 Rhododendron simsii HOM05D006376 ORTHO05D008046 9.8e-67 257.7 209 61.7
HPP92_000150 Vanilla planifolia HOM05D006376 ORTHO05D008046 1.3e-66 257.3 176 71.6
Duzib205G0506 Durio zibethinus HOM05D006376 ORTHO05D008046 1.7e-66 256.9 183 66.1
Actinidia02655 Actinidia chinensis HOM05D006376 ORTHO05D008046 2.8e-66 256.1 227 58.1
RhsimUnG0086600 Rhododendron simsii HOM05D006376 ORTHO05D008046 2.8e-66 256.1 206 61.7
ECA233G1742 Erigeron canadensis HOM05D006376 ORTHO05D008046 4.9e-66 255.4 175 68.6
PGSC0003DMG400028793 Solanum tuberosum HOM05D006376 ORTHO05D008046 6.3e-66 255.0 179 69.3
DCAR_014774 Daucus carota HOM05D006376 ORTHO05D008046 1.4e-65 253.8 205 61.5
Peaxi162Scf00332g00023 Petunia axillaris HOM05D006376 ORTHO05D008046 1.4e-65 253.8 182 68.7
Rhsim07G0070500 Rhododendron simsii HOM05D006376 ORTHO05D008046 1.4e-65 253.8 180 67.2
HanXRQChr05g0144491 Helianthus annuus HOM05D006376 ORTHO05D008046 1.8e-65 253.4 193 63.7
Solyc06g069030.3 Solanum lycopersicum HOM05D006376 ORTHO05D008046 1.8e-65 253.4 179 69.3
BcaC07g38909 Brassica carinata HOM05D006376 ORTHO05D008046 2.4e-65 253.1 163 71.8
Lsat_1_v5_gn_8_3561 Lactuca sativa HOM05D006376 ORTHO05D008046 2.4e-65 253.1 176 67.6
MSTRG.4559 Avicennia marina HOM05D006376 ORTHO05D008046 3.1e-65 252.7 203 64.0
Sopen06g026320 Solanum pennellii HOM05D006376 ORTHO05D008046 4.1e-65 252.3 179 69.3
EL10Ac5g11519 Beta vulgaris HOM05D006376 ORTHO05D008046 5.4e-65 251.9 180 66.7
Lj3g0018404 Lotus japonicus HOM05D006376 ORTHO05D008046 9.2e-65 251.1 181 70.2
Aa31LG6G2990 Aethionema arabicum HOM05D006376 ORTHO05D008046 2.0e-64 250.0 210 61.0
Ca_17222_v3 Cicer arietinum L. HOM05D006376 ORTHO05D008046 3.5e-64 249.2 164 70.1
Sp1g16080 Schrenkiella parvula HOM05D006376 ORTHO05D008046 4.3e-62 242.3 151 72.2
vmacro17793 Vaccinium macrocarpon HOM05D006376 ORTHO05D008046 1.4e-60 237.3 214 55.1
ClCG06G014480 Citrullus lanatus HOM05D006376 ORTHO05D008046 3.4e-59 232.6 178 64.6
SEGI_27865 Sequoiadendron giganteum HOM05D006376 ORTHO05D008046 4.4e-59 232.3 200 57.5
Pp3c8_21790 Physcomitrium patens HOM05D006376 ORTHO05D008046 5.7e-59 231.9 184 61.4
Duzib084G1315 Durio zibethinus HOM05D006376 ORTHO05D008046 1.4e-57 227.3 231 51.9
AagrBONN_evm.TU.Sc2ySwM_340.32 Anthoceros agrestis HOM05D006376 ORTHO05D008046 6.0e-56 221.9 208 51.4
Migut.D01443 Erythranthe guttata HOM05D006376 ORTHO05D008046 8.0e-53 211.5 175 58.9
unitig_21.g20431 Utricularia gibba HOM05D006376 ORTHO05D008046 2.0e-51 206.8 175 60.0
Gohir.A12G267700 Gossypium hirsutum HOM05D006376 ORTHO05D008046 1.3e-50 204.1 203 53.2
Mapoly0001s0324 Marchantia polymorpha HOM05D006376 ORTHO05D008046 8.3e-50 201.4 180 53.9
SMO116G0316 Selaginella moellendorffii HOM05D006376 ORTHO05D008046 6.0e-48 195.3 238 44.5
SMO164G0083 Selaginella moellendorffii HOM05D006376 ORTHO05D008046 4.3e-46 189.1 176 52.3
MD06G1223100 Malus domestica HOM05D006376 ORTHO05D008046 1.6e-45 187.2 125 69.6
SEGI_30520 Sequoiadendron giganteum HOM05D006376 ORTHO05D008046 7.6e-35 151.8 95 71.6
MD14G1232300 Malus domestica HOM05D006376 ORTHO05D008046 1.7e-23 114.0 110 54.5
Thecc.03G047400 Theobroma cacao HOM05D006376 ORTHO05D008046 1.1e-20 104.8 85 61.2
PRCOL_00002665 Prasinoderma coloniale HOM05D006376 ORTHO05D008046 2.4e-20 103.6 173 37.0
Cre09.g401350 Chlamydomonas reinhardtii HOM05D006376 ORTHO05D008046 5.8e-19 99.0 175 33.7
Rhsim07G0070600 Rhododendron simsii HOM05D006376 ORTHO05D008046 2.1e-16 90.5 76 59.2
SEGI_17791 Sequoiadendron giganteum HOM05D006376 ORTHO05D008046 2.3e-15 87.0 62 62.9
Hma1.2p1_0660F.1_g197690 Hydrangea macrophylla HOM05D006376 ORTHO05D008046 6.7e-15 85.5 97 48.5
arahy.Tifrunner.gnm1.ann1.VLX8JM Arachis hypogaea HOM05D006376 ORTHO05D008046 3.4e-11 73.2 110 45.5
arahy.Tifrunner.gnm1.ann1.FQ3MGU Arachis hypogaea HOM05D006376 ORTHO05D008046 4.5e-11 72.8 98 48.0
arahy.Tifrunner.gnm1.ann1.8TB400 Arachis hypogaea HOM05D006376 ORTHO05D008046 9.9e-11 71.6 98 45.9
arahy.Tifrunner.gnm1.ann1.W819WZ Arachis hypogaea HOM05D006376 ORTHO05D008046 9.9e-11 71.6 98 45.9
arahy.Tifrunner.gnm1.ann1.Y3IZ58 Arachis hypogaea HOM05D006376 ORTHO05D008046 9.9e-11 71.6 98 45.9
Dinv17636 Davidia involucrata HOM05D012663 ORTHO05D004533 2.4e-09 67.0 89 46.1
SMO170G0025 Selaginella moellendorffii HOM05D006376 ORTHO05D008046 1.3e-07 61.2 66 50.0
SMO137G0132 Selaginella moellendorffii HOM05D006376 ORTHO05D008046 6.7e-07 58.9 66 48.5


User provided reference genes

Program Settings