Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0691G289 Amborella trichopoda HOM05D005638 ORTHO05D006913 3.7e-241 837.8 426 100.0
GSVIVG01011806001 Vitis vinifera HOM05D005638 ORTHO05D006913 2.7e-151 539.3 412 69.4
Nn4g24022 Nelumbo nucifera HOM05D005638 ORTHO05D006913 6.1e-151 538.1 415 68.2
CSS0002078 Camellia sinensis var. sinensis HOM05D005638 ORTHO05D006913 3.0e-150 535.8 414 67.1
CSS0005399 Camellia sinensis var. sinensis HOM05D005638 ORTHO05D006913 6.7e-150 534.6 414 66.9
SEGI_39107 Sequoiadendron giganteum HOM05D005638 ORTHO05D006913 9.1e-147 524.2 417 65.0
Hma1.2p1_0882F.1_g232180 Hydrangea macrophylla HOM05D005638 ORTHO05D006913 1.5e-146 523.5 397 68.0
Ciclev10015376m.g Citrus clementina HOM05D005638 ORTHO05D006913 3.4e-146 522.3 415 67.5
CAN.G1489.15 Capsicum annuum HOM05D005638 ORTHO05D006913 1.1e-144 517.3 407 65.6
Potri.008G126300 Populus trichocarpa HOM05D005638 ORTHO05D006913 1.1e-144 517.3 413 65.6
QL01p003053 Quercus lobata HOM05D005638 ORTHO05D006913 1.1e-144 517.3 434 64.5
Prupe.1G319900 Prunus persica HOM05D005638 ORTHO05D006913 1.4e-144 516.9 414 65.7
PGSC0003DMG401030517 Solanum tuberosum HOM05D005638 ORTHO05D006913 5.5e-144 515.0 412 64.6
Migut.E00391 Erythranthe guttata HOM05D005638 ORTHO05D006913 2.1e-143 513.1 411 66.2
Gohir.A13G000300 Gossypium hirsutum HOM05D005638 ORTHO05D006913 4.7e-143 511.9 407 64.6
Gorai.013G001800 Gossypium raimondii HOM05D005638 ORTHO05D006913 6.1e-143 511.5 407 64.4
Hund25015 Selenicereus undatus HOM05D005638 ORTHO05D006913 6.1e-143 511.5 424 65.1
Haze_00683 Corylus avellana HOM05D005638 ORTHO05D006913 8.0e-143 511.1 422 64.7
Solyc05g008540.3 Solanum lycopersicum HOM05D005638 ORTHO05D006913 3.0e-142 509.2 407 64.4
HanXRQChr17g0534901 Helianthus annuus HOM05D005638 ORTHO05D006913 3.9e-142 508.8 412 63.8
Cc11_g09280 Coffea canephora HOM05D005638 ORTHO05D006913 5.2e-142 508.4 411 65.2
TWI75G0624 Tripterygium wilfordii HOM05D005638 ORTHO05D006913 8.8e-142 507.7 408 65.9
ECA246G4189 Erigeron canadensis HOM05D005638 ORTHO05D006913 1.5e-141 506.9 414 64.0
Sopen05g004380 Solanum pennellii HOM05D005638 ORTHO05D006913 2.0e-141 506.5 407 64.1
Nitab4.5_0000350g0120 Nicotiana tabacum HOM05D005638 ORTHO05D006913 2.6e-141 506.1 419 63.7
MSTRG.2199 Avicennia marina HOM05D005638 ORTHO05D006913 1.7e-140 503.4 414 65.0
arahy.Tifrunner.gnm1.ann1.CLD3MC Arachis hypogaea HOM05D005638 ORTHO05D006913 2.8e-140 502.7 408 64.2
Peaxi162Scf00205g01130 Petunia axillaris HOM05D005638 ORTHO05D006913 3.7e-140 502.3 411 62.8
arahy.Tifrunner.gnm1.ann1.NRC6UQ Arachis hypogaea HOM05D005638 ORTHO05D006913 6.3e-140 501.5 408 64.2
Sc14g0007070 Simmondsia chinensis HOM05D005638 ORTHO05D006913 6.3e-140 501.5 422 62.1
FAN12G2479 Fragaria x ananassa HOM05D005638 ORTHO05D006913 8.2e-140 501.1 414 63.5
FvH4_4g26400 Fragaria vesca HOM05D005638 ORTHO05D006913 1.1e-139 500.7 414 63.5
Sed0003483 Sechium edule HOM05D005638 ORTHO05D006913 1.1e-139 500.7 404 64.4
EL10Ac6g14273 Beta vulgaris HOM05D005638 ORTHO05D006913 1.8e-139 500.0 424 61.3
CANSAT01G0033 Cannabis sativa HOM05D005638 ORTHO05D006913 1.8e-139 500.0 409 64.1
Lj5g0007245 Lotus japonicus HOM05D005638 ORTHO05D006913 1.8e-139 500.0 400 65.0
Phvul.007G034200 Phaseolus vulgaris HOM05D005638 ORTHO05D006913 2.4e-139 499.6 407 63.4
Sabra08G0095100 Salix brachista HOM05D005638 ORTHO05D006913 3.1e-139 499.2 404 64.9
FAN12G3267 Fragaria x ananassa HOM05D005638 ORTHO05D006913 4.1e-139 498.8 414 63.5
Aqoxy5G03877 Aquilegia oxysepala HOM05D005638 ORTHO05D006913 5.3e-139 498.4 424 62.5
Glyma.20G123000 Glycine max HOM05D005638 ORTHO05D006913 5.3e-139 498.4 407 64.9
Lsat_1_v5_gn_3_11020 Lactuca sativa HOM05D005638 ORTHO05D006913 7.0e-139 498.0 422 62.1
MD16G1034700 Malus domestica HOM05D005638 ORTHO05D006913 7.0e-139 498.0 414 63.8
Thecc.05G134700 Theobroma cacao HOM05D005638 ORTHO05D006913 7.0e-139 498.0 407 64.9
Glyma.10G268100 Glycine max HOM05D005638 ORTHO05D006913 1.6e-138 496.9 410 64.6
Psat6g222760 Pisum sativum HOM05D005638 ORTHO05D006913 1.6e-138 496.9 411 63.3
Eucgr.H00037 Eucalyptus grandis HOM05D005638 ORTHO05D006913 1.0e-137 494.2 412 63.1
MELO3C034164.2 Cucumis melo HOM05D005638 ORTHO05D006913 1.7e-137 493.4 407 63.1
DCAR_001932 Daucus carota HOM05D005638 ORTHO05D006913 2.2e-137 493.0 404 62.9
Lalb_Chr02g0145641 Lupinus albus HOM05D005638 ORTHO05D006913 6.5e-137 491.5 406 62.1
PGR119G2299 Punica granatum HOM05D005638 ORTHO05D006913 8.5e-137 491.1 410 63.4
ClCG07G004650 Citrullus lanatus HOM05D005638 ORTHO05D006913 1.2e-135 487.3 416 62.3
COL.COLO4_22224 Corchorus olitorius HOM05D005638 ORTHO05D006913 1.2e-135 487.3 407 62.9
Medtr1g109100 Medicago truncatula HOM05D005638 ORTHO05D006913 1.6e-135 486.9 411 62.8
Ca_30212_v3 Cicer arietinum L. HOM05D005638 ORTHO05D006913 2.1e-135 486.5 401 64.1
CsaV3_5G010590 Cucumis sativus L. HOM05D005638 ORTHO05D006913 2.1e-135 486.5 407 61.7
THA.LOC104805050 Tarenaya hassleriana HOM05D005638 ORTHO05D006913 5.2e-134 481.9 406 62.6
PSO017G2298 Papaver somniferum HOM05D005638 ORTHO05D006913 1.3e-132 477.2 403 64.0
CARHR143670 Cardamine hirsuta HOM05D005638 ORTHO05D006913 3.7e-132 475.7 406 61.8
Oeu064207.2 Olea europaea HOM05D005638 ORTHO05D006913 4.8e-132 475.3 458 57.9
RcHm_v2.0_Chr4g0434031 Rosa chinensis HOM05D005638 ORTHO05D006913 6.3e-132 474.9 414 60.4
vmacro10617 Vaccinium macrocarpon HOM05D005638 ORTHO05D006913 1.8e-131 473.4 457 56.7
Lj2C166G5 Lonicera japonica HOM05D005638 ORTHO05D006913 3.1e-131 472.6 392 63.0
PSO478G2841 Papaver somniferum HOM05D005638 ORTHO05D006913 3.1e-131 472.6 403 63.5
Sp2g12590 Schrenkiella parvula HOM05D005638 ORTHO05D006913 1.6e-130 470.3 406 61.1
FAN07G1772 Fragaria x ananassa HOM05D005638 ORTHO05D006913 2.0e-130 469.9 457 57.3
AL5G10070 Arabidopsis lyrata HOM05D005638 ORTHO05D006913 4.5e-130 468.8 406 60.6
HPP92_020141 Vanilla planifolia HOM05D005638 ORTHO05D006913 7.7e-130 468.0 418 59.1
PSO782G2730 Papaver somniferum HOM05D005638 ORTHO05D006913 2.9e-129 466.1 403 63.3
Os01g0683400 Oryza sativa ssp. japonica HOM05D005638 ORTHO05D006913 5.0e-129 465.3 463 54.9
BcaC06g31332 Brassica carinata HOM05D005638 ORTHO05D006913 1.9e-128 463.4 413 59.3
Carub.0005s0010 Capsella rubella HOM05D005638 ORTHO05D006913 1.9e-128 463.4 406 60.8
CiPaw.05G245200 Carya illinoinensis HOM05D005638 ORTHO05D006913 3.2e-128 462.6 415 61.0
Manes.10G073400 Manihot esculenta HOM05D005638 ORTHO05D006913 3.2e-128 462.6 404 60.6
Thhalv10000894m.g Eutrema salsugineum HOM05D005638 ORTHO05D006913 6.1e-127 458.4 418 59.1
MBI10_g06749_MAGBIO Magnolia biondii HOM05D005638 ORTHO05D006913 2.3e-126 456.4 362 66.6
AT2G01120 Arabidopsis thaliana HOM05D005638 ORTHO05D006913 5.2e-126 455.3 407 60.0
A06p44660 Brassica napus HOM05D005638 ORTHO05D006913 5.7e-125 451.8 441 56.2
C07p31590 Brassica napus HOM05D005638 ORTHO05D006913 1.4e-123 447.2 441 56.0
BcaC06g34215 Brassica carinata HOM05D005638 ORTHO05D006913 1.8e-123 446.8 441 56.0
Aa31LG2G8760 Aethionema arabicum HOM05D005638 ORTHO05D006913 3.5e-122 442.6 412 58.5
Duzib106G1906 Durio zibethinus HOM05D005638 ORTHO05D006913 4.5e-122 442.2 398 59.5
AUR62042716 Chenopodium quinoa HOM05D005638 ORTHO05D006913 1.0e-121 441.0 451 54.8
Nitab4.5_0013146g0020 Nicotiana tabacum HOM05D005638 ORTHO05D006913 1.0e-121 441.0 482 52.9
Cpa.g.sc65.90 Carica papaya HOM05D005638 ORTHO05D006913 6.6e-121 438.3 384 61.5
SalBow8G2600 Salvia bowleyana HOM05D005638 ORTHO05D006913 8.6e-121 438.0 411 59.1
Atru.chr11.333 Acer truncatum HOM05D005638 ORTHO05D006913 3.6e-119 432.6 332 68.1
FAN17G1216 Fragaria x ananassa HOM05D005638 ORTHO05D006913 5.2e-118 428.7 440 56.6
FAN22G2072 Fragaria x ananassa HOM05D005638 ORTHO05D006913 7.5e-117 424.9 444 55.0
VMungo0720G2401 Vigna mungo HOM05D005638 ORTHO05D006913 9.8e-117 424.5 334 66.2
Dinv16164 Davidia involucrata HOM05D005638 ORTHO05D006913 1.4e-115 420.6 318 70.1
Gohir.D13G001900 Gossypium hirsutum HOM05D005638 ORTHO05D006913 5.9e-114 415.2 407 55.8
BcaB07g30423 Brassica carinata HOM05D005638 ORTHO05D006913 1.0e-113 414.5 439 53.5
unitig_52.g17425 Utricularia gibba HOM05D005638 ORTHO05D006913 8.6e-113 411.4 420 55.2
BraA06t27339Z Brassica rapa HOM05D005638 ORTHO05D006913 1.0e-110 404.4 415 53.5
TAR622G0052 Trochodendron aralioides HOM05D005638 ORTHO05D006913 1.3e-108 397.5 317 67.5
Pp3c16_11150 Physcomitrium patens HOM05D005638 ORTHO05D006913 2.0e-106 390.2 390 53.3
Zm00001eb156550 Zea mays HOM05D005638 ORTHO05D006913 7.8e-106 388.3 414 53.9
Atru.chr11.340 Acer truncatum HOM05D005638 ORTHO05D006913 6.6e-105 385.2 307 67.4
Mapoly0031s0066 Marchantia polymorpha HOM05D005638 ORTHO05D006913 1.8e-102 377.1 419 51.1
CBR_g38777 Chara braunii HOM05D005638 ORTHO05D006913 2.5e-96 356.7 389 50.6
Rhsim11G0032100 Rhododendron simsii HOM05D005638 ORTHO05D006913 6.2e-95 352.1 287 65.2
Ah.03g138510 Amaranthus hybridus HOM05D005638 ORTHO05D006913 8.1e-87 325.1 289 58.5
Dinv04905 Davidia involucrata HOM05D005638 ORTHO05D006913 1.1e-83 314.7 416 48.1
TPR.G31713 Trifolium pratense HOM05D005638 ORTHO05D006913 9.2e-83 311.6 266 62.8
Ca_23705_v3 Cicer arietinum L. HOM05D005638 ORTHO05D006913 2.1e-82 310.5 235 68.5
SGA_v2.0_scaffold170G38821 Striga asiatica HOM05D005638 ORTHO05D006913 1.0e-81 308.1 257 65.4
Cfa015815 Carpinus fangiana HOM05D005638 ORTHO05D006913 8.7e-81 305.1 218 72.5
Hma1.2p1_0882F.1_g232170 Hydrangea macrophylla HOM05D005638 ORTHO05D006913 4.3e-80 302.8 202 74.8
AagrBONN_evm.TU.Sc2ySwM_344.3309 Anthoceros agrestis HOM05D005638 ORTHO05D006913 4.4e-77 292.7 316 50.6
A02p31700 Brassica napus HOM05D005638 ORTHO05D006913 1.6e-71 274.2 317 49.8
AUR62014211 Chenopodium quinoa HOM05D005638 ORTHO05D006913 3.4e-69 266.5 365 46.3
BcaC03g16999 Brassica carinata HOM05D005638 ORTHO05D006913 1.6e-63 247.7 244 55.7
PRCOL_00001621 Prasinoderma coloniale HOM05D005638 ORTHO05D006913 1.1e-62 245.0 434 37.3
C02p49080 Brassica napus HOM05D005638 ORTHO05D006913 7.1e-59 232.3 309 46.3
PSO170G3371 Papaver somniferum HOM05D005638 ORTHO05D006913 1.5e-56 224.6 225 56.0
SEGI_20204 Sequoiadendron giganteum HOM05D005638 ORTHO05D006913 3.3e-56 223.4 179 64.8
BolC2t10998H Brassica oleracea HOM05D005638 ORTHO05D006913 3.7e-55 219.9 251 50.2
MD13G1032700 Malus domestica HOM05D005638 ORTHO05D006913 1.3e-47 194.9 167 63.5
CDE11G0817 Ceratophyllum demersum HOM05D005638 ORTHO05D006913 1.4e-46 191.4 125 73.6
Thecc.06G067600 Theobroma cacao HOM05D005638 ORTHO05D006913 4.1e-46 189.9 133 70.7
SMO351G0247 Selaginella moellendorffii HOM05D005638 ORTHO05D006913 1.7e-44 184.5 402 34.3
Hma1.2p1_0882F.1_g232190 Hydrangea macrophylla HOM05D005638 ORTHO05D006913 2.2e-44 184.1 138 67.4
MD13G1032600 Malus domestica HOM05D005638 ORTHO05D006913 1.8e-41 174.5 146 61.6
MCO02G007 Micromonas commoda HOM05D005638 ORTHO05D006913 3.7e-39 166.8 310 37.7
BraA02t08176Z Brassica rapa HOM05D005638 ORTHO05D006913 1.5e-29 134.8 102 71.6
CDE11G0802 Ceratophyllum demersum HOM05D005638 ORTHO05D006913 2.9e-28 130.6 105 61.9
Cfa022174 Carpinus fangiana HOM05D005638 ORTHO05D006913 9.4e-27 125.6 359 30.1
TPR.G15740 Trifolium pratense HOM05D005638 ORTHO05D006913 9.4e-27 125.6 110 61.8
Rhsim11G0032000 Rhododendron simsii HOM05D005638 ORTHO05D006913 1.2e-26 125.2 151 48.3
SEGI_29357 Sequoiadendron giganteum HOM05D005638 ORTHO05D006913 7.0e-22 109.4 96 58.3
Cre17.g726500 Chlamydomonas reinhardtii HOM05D005638 ORTHO05D006913 5.9e-21 106.3 207 34.3
TPR.G7417 Trifolium pratense HOM05D005638 ORTHO05D006913 1.5e-19 101.7 92 56.5
Rhsim09G0101800 Rhododendron simsii HOM05D005638 ORTHO05D006913 5.7e-16 89.7 121 51.2
Rhsim09G0101700 Rhododendron simsii HOM05D005638 ORTHO05D006913 1.1e-14 85.5 79 53.2
FAN28G2655 Fragaria x ananassa HOM05D005638 ORTHO05D006913 9.1e-14 82.4 65 55.4
SHI16222 Sapria himalayana HOM05D000030 ORTHO05D007344 4.5e-13 80.1 54 74.1


User provided reference genes

Program Settings