Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0691G114 Amborella trichopoda HOM05D007596 ORTHO05D009672 1.5e-132 476.1 228 100.0
Nn4g22825 Nelumbo nucifera HOM05D007596 ORTHO05D009672 1.1e-95 353.6 222 72.5
TAR374G1438 Trochodendron aralioides HOM05D007596 ORTHO05D009672 3.3e-95 352.1 220 71.8
Dinv20674 Davidia involucrata HOM05D007596 ORTHO05D009672 9.6e-95 350.5 220 70.5
PSO063G6591 Papaver somniferum HOM05D007596 ORTHO05D009672 4.8e-94 348.2 220 70.0
PSO832G1789 Papaver somniferum HOM05D007596 ORTHO05D009672 3.1e-93 345.5 220 69.1
Aqoxy3G00967 Aquilegia oxysepala HOM05D007596 ORTHO05D009672 2.5e-90 335.9 222 67.1
Lj9A451T97 Lonicera japonica HOM05D007596 ORTHO05D009672 2.7e-89 332.4 220 69.1
GSVIVG01007788001 Vitis vinifera HOM05D007596 ORTHO05D009672 1.8e-88 329.7 217 68.7
EL10Ac5g10784 Beta vulgaris HOM05D007596 ORTHO05D009672 6.7e-88 327.8 220 65.9
MBI15_g31109_MAGBIO Magnolia biondii HOM05D007596 ORTHO05D009672 1.5e-87 326.6 218 68.3
Cc04_g12800 Coffea canephora HOM05D007596 ORTHO05D009672 1.9e-87 326.2 220 64.5
Rhsim12G0163300 Rhododendron simsii HOM05D007596 ORTHO05D009672 1.9e-87 326.2 217 66.4
SGA_v2.0_scaffold90G27960 Striga asiatica HOM05D007596 ORTHO05D009672 3.3e-87 325.5 220 66.4
HanXRQChr16g0503661 Helianthus annuus HOM05D007596 ORTHO05D009672 1.3e-86 323.6 220 65.9
Oeu041561.1 Olea europaea HOM05D007596 ORTHO05D009672 2.8e-86 322.4 217 64.5
vmacro16599 Vaccinium macrocarpon HOM05D007596 ORTHO05D009672 1.4e-85 320.1 217 66.4
TWI15G1048 Tripterygium wilfordii HOM05D007596 ORTHO05D009672 3.1e-85 318.9 220 65.0
CSS0015692 Camellia sinensis var. sinensis HOM05D007596 ORTHO05D009672 1.5e-84 316.6 217 65.9
ECA232G2922 Erigeron canadensis HOM05D007596 ORTHO05D009672 1.5e-84 316.6 220 63.2
Potri.012G078600 Populus trichocarpa HOM05D007596 ORTHO05D009672 2.6e-84 315.8 221 64.3
CANSAT80G2510 Cannabis sativa HOM05D007596 ORTHO05D009672 1.0e-83 313.9 217 64.1
Hma1.2p1_0701F.1_g205970 Hydrangea macrophylla HOM05D007596 ORTHO05D009672 1.7e-83 313.2 221 65.2
CiPaw.11G029100 Carya illinoinensis HOM05D007596 ORTHO05D009672 2.2e-83 312.8 220 61.8
HPP92_019181 Vanilla planifolia HOM05D007596 ORTHO05D009672 2.9e-83 312.4 223 63.2
DCAR_026124 Daucus carota HOM05D007596 ORTHO05D009672 3.8e-83 312.0 217 63.1
Migut.I00032 Erythranthe guttata HOM05D007596 ORTHO05D009672 6.5e-83 311.2 221 64.3
Nitab4.5_0007803g0020 Nicotiana tabacum HOM05D007596 ORTHO05D009672 1.1e-82 310.5 220 61.8
Thecc.03G008700 Theobroma cacao HOM05D007596 ORTHO05D009672 1.4e-82 310.1 220 63.6
Eucgr.K02859 Eucalyptus grandis HOM05D007596 ORTHO05D009672 5.5e-82 308.1 226 62.4
Nitab4.5_0000003g0490 Nicotiana tabacum HOM05D007596 ORTHO05D009672 7.1e-82 307.8 220 60.9
Duzib205G0154 Durio zibethinus HOM05D007596 ORTHO05D009672 9.3e-82 307.4 220 63.2
ClCG01G013000 Citrullus lanatus HOM05D007596 ORTHO05D009672 2.7e-81 305.8 220 61.4
Sopen06g027660 Solanum pennellii HOM05D007596 ORTHO05D009672 2.7e-81 305.8 220 61.8
CsaV3_1G008350 Cucumis sativus L. HOM05D007596 ORTHO05D009672 4.6e-81 305.1 220 61.4
Solyc06g071380.3 Solanum lycopersicum HOM05D007596 ORTHO05D009672 4.6e-81 305.1 220 61.8
PGSC0003DMG400027097 Solanum tuberosum HOM05D007596 ORTHO05D009672 4.6e-81 305.1 220 61.4
Zm00001eb080350 Zea mays HOM05D007596 ORTHO05D009672 1.8e-80 303.1 224 62.5
MSTRG.11436 Avicennia marina HOM05D007596 ORTHO05D009672 2.3e-80 302.8 220 62.7
SalBow5G3112 Salvia bowleyana HOM05D007596 ORTHO05D009672 3.9e-80 302.0 218 64.7
FAN08G2413 Fragaria x ananassa HOM05D007596 ORTHO05D009672 6.7e-80 301.2 222 61.3
FAN13G0067 Fragaria x ananassa HOM05D007596 ORTHO05D009672 6.7e-80 301.2 222 61.3
RcHm_v2.0_Chr7g0193891 Rosa chinensis HOM05D007596 ORTHO05D009672 8.7e-80 300.8 222 60.8
Hund02735 Selenicereus undatus HOM05D007596 ORTHO05D009672 1.1e-79 300.4 220 63.2
FAN18G0106 Fragaria x ananassa HOM05D007596 ORTHO05D009672 1.9e-79 299.7 222 60.8
FvH4_5g05110 Fragaria vesca HOM05D007596 ORTHO05D009672 2.5e-79 299.3 222 60.4
Atru.chr9.2439 Acer truncatum HOM05D007596 ORTHO05D009672 5.7e-79 298.1 217 65.0
Gohir.A09G169500 Gossypium hirsutum HOM05D007596 ORTHO05D009672 5.7e-79 298.1 220 62.3
Sed0010804 Sechium edule HOM05D007596 ORTHO05D009672 2.2e-78 296.2 220 60.0
Gorai.006G187000 Gossypium raimondii HOM05D007596 ORTHO05D009672 2.8e-78 295.8 220 61.4
Os04g0465800 Oryza sativa ssp. japonica HOM05D007596 ORTHO05D009672 1.8e-77 293.1 227 61.2
MD06G1177600 Malus domestica HOM05D007596 ORTHO05D009672 2.4e-77 292.7 220 59.1
Manes.06G103100 Manihot esculenta HOM05D007596 ORTHO05D009672 2.4e-77 292.7 221 59.3
Lj4g0018893 Lotus japonicus HOM05D007596 ORTHO05D009672 2.6e-76 289.3 221 58.8
Ciclev10021737m.g Citrus clementina HOM05D007596 ORTHO05D009672 3.4e-76 288.9 219 59.8
PGR044G0668 Punica granatum HOM05D007596 ORTHO05D009672 4.5e-76 288.5 224 60.3
Sabra12G0056400 Salix brachista HOM05D007596 ORTHO05D009672 1.7e-75 286.6 263 52.5
Medtr4g106630 Medicago truncatula HOM05D007596 ORTHO05D009672 2.7e-73 279.3 223 54.7
FAN18G0038 Fragaria x ananassa HOM05D007596 ORTHO05D009672 3.0e-72 275.8 214 57.9
Lalb_Chr13g0297881 Lupinus albus HOM05D007596 ORTHO05D009672 5.7e-71 271.6 221 55.2
Psat4g056920 Pisum sativum HOM05D007596 ORTHO05D009672 5.7e-71 271.6 223 54.7
Glyma.05G036200 Glycine max HOM05D007596 ORTHO05D009672 1.3e-70 270.4 221 54.8
COL.COLO4_34057 Corchorus olitorius HOM05D007596 ORTHO05D009672 3.7e-70 268.9 224 58.5
Phvul.003G198900 Phaseolus vulgaris HOM05D007596 ORTHO05D009672 6.3e-70 268.1 221 54.8
Lsat_1_v5_gn_4_73100 Lactuca sativa HOM05D007596 ORTHO05D009672 9.1e-69 264.2 220 56.4
Sc04g0001910 Simmondsia chinensis HOM05D007596 ORTHO05D009672 2.6e-68 262.7 179 66.5
Prupe.5G176300 Prunus persica HOM05D007596 ORTHO05D009672 1.3e-67 260.4 178 66.9
arahy.Tifrunner.gnm1.ann1.3E9X4W Arachis hypogaea HOM05D007596 ORTHO05D009672 6.5e-67 258.1 221 52.9
arahy.Tifrunner.gnm1.ann1.8F9XT7 Arachis hypogaea HOM05D007596 ORTHO05D009672 2.5e-66 256.1 221 52.5
Peaxi162Scf00689g00036 Petunia axillaris HOM05D007596 ORTHO05D009672 2.5e-66 256.1 220 54.1
Psat4g101560 Pisum sativum HOM05D007596 ORTHO05D009672 6.1e-65 251.5 221 52.9
Cfa019092 Carpinus fangiana HOM05D007596 ORTHO05D009672 3.0e-64 249.2 177 61.6
Gohir.D09G165200 Gossypium hirsutum HOM05D007596 ORTHO05D009672 2.6e-60 236.1 220 51.8
TPR.G37562 Trifolium pratense HOM05D007596 ORTHO05D009672 7.7e-60 234.6 222 49.5
SMO347G0014 Selaginella moellendorffii HOM05D007596 ORTHO05D009672 1.7e-59 233.4 179 58.7
VMungo1215G2651 Vigna mungo HOM05D007596 ORTHO05D009672 3.6e-57 225.7 226 49.6
Ca_21906_v3 Cicer arietinum L. HOM05D007596 ORTHO05D009672 3.7e-54 215.7 173 57.8
Ca_21924_v3 Cicer arietinum L. HOM05D007596 ORTHO05D009672 3.7e-54 215.7 173 57.8
Ah.13g077910 Amaranthus hybridus HOM05D007596 ORTHO05D004562 5.0e-51 205.3 199 52.8
SGA_v2.0_scaffold90G27962 Striga asiatica HOM05D007596 ORTHO05D009672 1.6e-49 200.3 161 57.1
QL10p012241 Quercus lobata HOM05D007596 ORTHO05D009672 1.4e-45 187.2 132 61.4
Haze_07490 Corylus avellana HOM05D007596 ORTHO05D009672 8.3e-38 161.4 131 55.0
unitig_26.g8797 Utricularia gibba HOM05D007596 ORTHO05D009672 9.5e-34 147.9 252 36.1
COL.COLO4_33480 Corchorus olitorius HOM05D007596 ORTHO05D009672 1.1e-29 134.4 107 57.0
CiPaw.11G029000 Carya illinoinensis HOM05D007596 ORTHO05D009672 2.4e-29 133.3 88 63.6
Glyma.17G091200 Glycine max HOM05D007596 ORTHO05D009672 3.2e-29 132.9 159 42.1
AUR62030990 Chenopodium quinoa HOM05D007596 ORTHO05D009672 5.4e-29 132.1 89 62.9
FAN04G0664 Fragaria x ananassa HOM05D007596 ORTHO05D009672 1.6e-28 130.6 118 48.3
CBR_g18641 Chara braunii HOM05D007596 ORTHO05D009672 8.0e-25 118.2 106 51.9
FvH4_5g16630 Fragaria vesca HOM05D007596 ORTHO05D009672 1.2e-23 114.4 195 36.4
FAN18G2080 Fragaria x ananassa HOM05D007596 ORTHO05D009672 3.4e-23 112.8 195 36.4
Cpa.g.c40406 Carica papaya HOM05D007596 ORTHO05D009672 1.2e-20 104.4 98 51.0
Sc11g0005570 Simmondsia chinensis HOM05D007596 ORTHO05D009672 2.7e-20 103.2 59 71.2
Sc11g0005890 Simmondsia chinensis HOM05D007596 ORTHO05D009672 6.0e-20 102.1 59 69.5
SGA_v2.0_scaffold90G27974 Striga asiatica HOM05D001155 ORTHO05D001080 1.9e-18 97.1 90 51.1
SGA_v2.0_scaffold90G27967 Striga asiatica HOM05D007596 ORTHO05D009672 8.9e-16 88.2 74 56.8
EL10Ac4g09605 Beta vulgaris HOM05D004918 ORTHO05D005706 1.1e-13 81.3 113 36.3


User provided reference genes

Program Settings