Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0686G226 Amborella trichopoda HOM05D007719 ORTHO05D009782 1.7e-238 828.9 414 100.0
QL01p001957 Quercus lobata HOM05D007719 ORTHO05D009782 1.6e-164 583.2 370 76.5
Dinv05161 Davidia involucrata HOM05D007719 ORTHO05D009782 3.0e-163 578.9 371 76.0
FvH4_4g32280 Fragaria vesca HOM05D007719 ORTHO05D009782 3.0e-163 578.9 391 73.9
FAN12G3181 Fragaria x ananassa HOM05D007719 ORTHO05D009782 3.0e-163 578.9 391 73.9
CSS0046068 Camellia sinensis var. sinensis HOM05D007719 ORTHO05D009782 1.1e-162 577.0 387 72.1
FAN22G2057 Fragaria x ananassa HOM05D007719 ORTHO05D009782 1.5e-162 576.6 414 69.6
FAN07G1524 Fragaria x ananassa HOM05D007719 ORTHO05D009782 2.0e-162 576.2 352 78.1
TAR629G1042 Trochodendron aralioides HOM05D007719 ORTHO05D009782 2.0e-162 576.2 369 75.3
Potri.010G114100 Populus trichocarpa HOM05D007719 ORTHO05D009782 9.7e-162 573.9 411 69.8
MD16G1029600 Malus domestica HOM05D007719 ORTHO05D009782 1.3e-161 573.5 374 75.1
Gorai.008G166400 Gossypium raimondii HOM05D007719 ORTHO05D009782 4.8e-161 571.6 391 71.1
vmacro10633 Vaccinium macrocarpon HOM05D007719 ORTHO05D009782 4.8e-161 571.6 391 72.4
Atru.chr11.428 Acer truncatum HOM05D007719 ORTHO05D009782 6.3e-161 571.2 395 71.9
Gohir.A12G150300 Gossypium hirsutum HOM05D007719 ORTHO05D009782 6.3e-161 571.2 391 71.6
Lalb_Chr17g0338681 Lupinus albus HOM05D007719 ORTHO05D009782 1.8e-160 569.7 374 73.5
COL.COLO4_20469 Corchorus olitorius HOM05D007719 ORTHO05D009782 2.6e-159 565.8 413 69.0
Psat0s3407g0080 Pisum sativum HOM05D007719 ORTHO05D009782 2.6e-159 565.8 359 75.8
TWI75G0056 Tripterygium wilfordii HOM05D007719 ORTHO05D009782 3.5e-159 565.5 364 75.8
PGR119G0428 Punica granatum HOM05D007719 ORTHO05D009782 2.2e-158 562.8 404 69.3
CiPaw.05G248600 Carya illinoinensis HOM05D007719 ORTHO05D009782 3.8e-158 562.0 389 72.5
RcHm_v2.0_Chr4g0441071 Rosa chinensis HOM05D007719 ORTHO05D009782 5.0e-158 561.6 349 77.1
FAN17G2178 Fragaria x ananassa HOM05D007719 ORTHO05D009782 1.1e-157 560.5 341 78.3
TPR.G36961 Trifolium pratense HOM05D007719 ORTHO05D009782 1.9e-157 559.7 363 74.4
VMungo1215G2618 Vigna mungo HOM05D007719 ORTHO05D009782 1.9e-157 559.7 374 73.0
Medtr1g030640 Medicago truncatula HOM05D007719 ORTHO05D009782 3.2e-157 558.9 363 74.4
Glyma.09G119300 Glycine max HOM05D007719 ORTHO05D009782 5.5e-157 558.1 387 71.1
Ca_25710_v3 Cicer arietinum L. HOM05D007719 ORTHO05D009782 7.2e-157 557.8 381 71.9
Rhsim09G0099000 Rhododendron simsii HOM05D007719 ORTHO05D009782 9.4e-157 557.4 351 75.5
ECA234G0976 Erigeron canadensis HOM05D007719 ORTHO05D009782 3.6e-156 555.4 370 73.0
arahy.Tifrunner.gnm1.ann1.Y8VIVB Arachis hypogaea HOM05D007719 ORTHO05D009782 4.7e-156 555.1 355 74.4
Manes.15G114900 Manihot esculenta HOM05D007719 ORTHO05D009782 8.0e-156 554.3 360 74.7
Lj2g0007830 Lotus japonicus HOM05D007719 ORTHO05D009782 1.8e-155 553.1 352 75.0
AUR62002606 Chenopodium quinoa HOM05D007719 ORTHO05D009782 5.2e-155 551.6 381 70.6
Lsat_1_v5_gn_4_14941 Lactuca sativa HOM05D007719 ORTHO05D009782 5.2e-155 551.6 368 72.8
Sed0008286 Sechium edule HOM05D007719 ORTHO05D009782 5.2e-155 551.6 365 74.2
EL10Ac3g06304 Beta vulgaris HOM05D007719 ORTHO05D009782 6.7e-155 551.2 404 68.1
AUR62030024 Chenopodium quinoa HOM05D007719 ORTHO05D009782 1.5e-154 550.1 370 71.9
ClCG01G006100 Citrullus lanatus HOM05D007719 ORTHO05D009782 1.5e-154 550.1 386 70.2
Sc11g0004120 Simmondsia chinensis HOM05D007719 ORTHO05D009782 1.5e-154 550.1 386 71.2
CsaV3_5G028560 Cucumis sativus L. HOM05D007719 ORTHO05D009782 3.3e-154 548.9 366 72.4
Phvul.003G022800 Phaseolus vulgaris HOM05D007719 ORTHO05D009782 3.3e-154 548.9 382 70.9
Actinidia36679 Actinidia chinensis HOM05D007719 ORTHO05D009782 4.4e-154 548.5 377 71.1
Hund24987 Selenicereus undatus HOM05D007719 ORTHO05D009782 7.5e-154 547.7 406 67.7
HanXRQChr17g0566951 Helianthus annuus HOM05D007719 ORTHO05D009782 9.7e-154 547.4 369 71.8
Nitab4.5_0004776g0060 Nicotiana tabacum HOM05D007719 ORTHO05D009782 1.3e-153 547.0 350 76.9
Eucgr.G02196 Eucalyptus grandis HOM05D007719 ORTHO05D009782 2.8e-153 545.8 411 67.6
Cc11_g08840 Coffea canephora HOM05D007719 ORTHO05D009782 1.8e-152 543.1 364 72.0
Sopen05g004110 Solanum pennellii HOM05D007719 ORTHO05D009782 1.8e-152 543.1 352 75.6
HPP92_021852 Vanilla planifolia HOM05D007719 ORTHO05D009782 2.4e-152 542.7 354 72.3
Sabra10G0084100 Salix brachista HOM05D007719 ORTHO05D009782 4.1e-152 542.0 392 68.6
CAN.G1334.8 Capsicum annuum HOM05D007719 ORTHO05D009782 1.2e-151 540.4 371 72.8
Oeu034423.3 Olea europaea HOM05D007719 ORTHO05D009782 1.6e-151 540.0 420 66.4
SEGI_18275 Sequoiadendron giganteum HOM05D007719 ORTHO05D009782 1.6e-151 540.0 364 70.3
Solyc05g008270.3 Solanum lycopersicum HOM05D007719 ORTHO05D009782 2.0e-151 539.7 352 75.0
MSTRG.23215 Avicennia marina HOM05D007719 ORTHO05D009782 5.9e-151 538.1 397 69.8
Ah.07g204110 Amaranthus hybridus HOM05D007719 ORTHO05D009782 7.7e-151 537.7 378 70.4
Os01g0127400 Oryza sativa ssp. japonica HOM05D007719 ORTHO05D009782 5.0e-150 535.0 412 65.8
SalBow5G1767 Salvia bowleyana HOM05D007719 ORTHO05D009782 1.5e-149 533.5 394 68.3
PGSC0003DMG400030550 Solanum tuberosum HOM05D007719 ORTHO05D009782 2.5e-149 532.7 363 73.0
DCAR_030215 Daucus carota HOM05D007719 ORTHO05D009782 5.5e-149 531.6 358 72.9
SGA_v2.0_scaffold25G10737 Striga asiatica HOM05D007719 ORTHO05D009782 9.8e-146 520.8 450 62.4
Migut.O00274 Erythranthe guttata HOM05D007719 ORTHO05D009782 3.7e-145 518.8 361 71.7
Prupe.1G323300 Prunus persica HOM05D007719 ORTHO05D009782 3.1e-144 515.8 335 74.9
arahy.Tifrunner.gnm1.ann1.L198GP Arachis hypogaea HOM05D007719 ORTHO05D009782 4.1e-144 515.4 355 70.7
Mapoly0070s0076 Marchantia polymorpha HOM05D007719 ORTHO05D009782 4.1e-144 515.4 368 67.1
unitig_61.g26194 Utricularia gibba HOM05D007719 ORTHO05D009782 3.2e-141 505.8 360 69.2
Peaxi162Scf00205g00122 Petunia axillaris HOM05D007719 ORTHO05D009782 4.0e-139 498.8 354 71.8
Pp3c1_3200 Physcomitrium patens HOM05D007719 ORTHO05D009782 5.2e-139 498.4 348 66.7
SMO236G0033 Selaginella moellendorffii HOM05D007719 ORTHO05D009782 1.6e-135 486.9 353 66.3
SMO236G0110 Selaginella moellendorffii HOM05D007719 ORTHO05D009782 1.6e-135 486.9 353 66.3
CDE04G3405 Ceratophyllum demersum HOM05D007719 ORTHO05D009782 6.1e-132 474.9 373 66.5
MELO3C005317.2 Cucumis melo HOM05D007719 ORTHO05D009782 9.8e-130 467.6 398 61.3
GSVIVG01011772001 Vitis vinifera HOM05D007719 ORTHO05D009782 1.2e-124 450.7 300 75.0
Actinidia15254 Actinidia chinensis HOM05D007719 ORTHO05D009782 6.2e-124 448.4 391 60.4
Zm00001eb125300 Zea mays HOM05D007719 ORTHO05D009782 1.0e-123 447.6 399 58.6
SMO187G0003 Selaginella moellendorffii HOM05D007719 ORTHO05D009782 1.3e-110 404.1 353 58.4
Thecc.02G280000 Theobroma cacao HOM05D007719 ORTHO05D009782 2.3e-110 403.3 265 75.1
Gohir.D12G153900 Gossypium hirsutum HOM05D007719 ORTHO05D009782 2.2e-105 386.7 256 75.0
Cpa.g.sc65.124 Carica papaya HOM05D007719 ORTHO05D009782 2.1e-100 370.2 262 69.8
Haze_11019 Corylus avellana HOM05D007719 ORTHO05D009782 4.4e-98 362.5 291 66.3
AagrBONN_evm.TU.Sc2ySwM_228.3777 Anthoceros agrestis HOM05D007719 ORTHO05D009782 1.7e-97 360.5 270 64.1
SEGI_23314 Sequoiadendron giganteum HOM05D007719 ORTHO05D009782 3.8e-89 332.8 232 67.7
Cfa008596 Carpinus fangiana HOM05D007719 ORTHO05D009782 2.8e-84 316.6 226 69.9
CBR_g12440 Chara braunii HOM05D007719 ORTHO05D009782 6.4e-81 305.4 351 46.4
Nn4g24120 Nelumbo nucifera HOM05D007719 ORTHO05D009782 3.5e-79 299.7 174 80.5
Duzib268G0649 Durio zibethinus HOM05D007719 ORTHO05D009782 3.6e-63 246.5 199 63.8
GSVIVG01011775001 Vitis vinifera HOM05D007719 ORTHO05D009782 6.5e-57 225.7 145 75.9
Cfa008597 Carpinus fangiana HOM05D007719 ORTHO05D009782 7.2e-48 195.7 142 66.2
Haze_11018 Corylus avellana HOM05D007719 ORTHO05D009782 6.7e-46 189.1 123 70.7
TPR.G29132 Trifolium pratense HOM05D007719 ORTHO05D009782 3.2e-11 73.9 77 54.5


User provided reference genes

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