Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0686G190 Amborella trichopoda HOM05D006540 ORTHO05D008202 1.2e-167 593.2 314 100.0
CiPaw.05G182700 Carya illinoinensis HOM05D006540 ORTHO05D008202 3.2e-96 355.9 269 70.3
Atru.chr11.2104 Acer truncatum HOM05D006540 ORTHO05D008202 9.2e-96 354.4 295 65.1
Cpa.g.sc33.16 Carica papaya HOM05D006540 ORTHO05D008202 5.9e-95 351.7 291 65.3
Cc11_g15700 Coffea canephora HOM05D006540 ORTHO05D008202 1.3e-94 350.5 248 72.2
MD16G1102400 Malus domestica HOM05D006540 ORTHO05D008202 8.6e-94 347.8 311 61.1
MSTRG.568 Avicennia marina HOM05D006540 ORTHO05D008202 1.9e-93 346.7 268 68.7
Migut.K00595 Erythranthe guttata HOM05D006540 ORTHO05D008202 5.6e-93 345.1 248 72.2
ClCG05G025710 Citrullus lanatus HOM05D006540 ORTHO05D008202 4.7e-92 342.0 284 67.3
CDE09G1037 Ceratophyllum demersum HOM05D006540 ORTHO05D008202 1.4e-91 340.5 280 65.0
MD13G1101900 Malus domestica HOM05D006540 ORTHO05D008202 2.3e-91 339.7 327 58.4
SalBow2G2200 Salvia bowleyana HOM05D006540 ORTHO05D008202 2.3e-91 339.7 273 66.3
CDE02G2769 Ceratophyllum demersum HOM05D006540 ORTHO05D008202 4.0e-91 339.0 267 66.7
Cfa009208 Carpinus fangiana HOM05D006540 ORTHO05D008202 2.0e-90 336.7 280 65.0
Oeu059907.1 Olea europaea HOM05D006540 ORTHO05D008202 2.6e-90 336.3 287 63.1
Duzib268G1404 Durio zibethinus HOM05D006540 ORTHO05D008202 3.4e-90 335.9 289 64.4
Eucgr.B03288 Eucalyptus grandis HOM05D006540 ORTHO05D008202 5.8e-90 335.1 281 65.1
Lj4g0023216 Lotus japonicus HOM05D006540 ORTHO05D008202 5.8e-90 335.1 274 66.1
vmacro16198 Vaccinium macrocarpon HOM05D006540 ORTHO05D008202 2.9e-89 332.8 297 61.3
Potri.013G090000 Populus trichocarpa HOM05D006540 ORTHO05D008202 4.9e-89 332.0 293 62.5
Glyma.17G134500 Glycine max HOM05D006540 ORTHO05D008202 1.9e-88 330.1 273 64.8
Hma1.2p1_0223F.1_g093990 Hydrangea macrophylla HOM05D006540 ORTHO05D008202 1.9e-88 330.1 319 59.6
Phvul.003G064400 Phaseolus vulgaris HOM05D006540 ORTHO05D008202 5.4e-88 328.6 267 66.3
Sabra13G0070200 Salix brachista HOM05D006540 ORTHO05D008202 7.0e-88 328.2 295 62.0
Aa31LG2G5960 Aethionema arabicum HOM05D006540 ORTHO05D008202 1.2e-87 327.4 331 57.1
EL10Ac6g13801 Beta vulgaris HOM05D006540 ORTHO05D008202 1.2e-87 327.4 287 62.4
TAR622G1382 Trochodendron aralioides HOM05D006540 ORTHO05D008202 1.6e-87 327.0 285 62.8
PSO017G4849 Papaver somniferum HOM05D006540 ORTHO05D008202 2.7e-87 326.2 279 65.9
Actinidia37429 Actinidia chinensis HOM05D006540 ORTHO05D008202 2.3e-86 323.2 243 70.0
Nn4g22628 Nelumbo nucifera HOM05D006540 ORTHO05D008202 3.0e-86 322.8 193 80.8
Ca_22583_v3 Cicer arietinum L. HOM05D006540 ORTHO05D008202 3.9e-86 322.4 239 73.2
Prupe.1G243900 Prunus persica HOM05D006540 ORTHO05D008202 3.9e-86 322.4 314 58.0
PGR102G2745 Punica granatum HOM05D006540 ORTHO05D008202 5.0e-86 322.0 294 63.3
RcHm_v2.0_Chr4g0432921 Rosa chinensis HOM05D006540 ORTHO05D008202 5.0e-86 322.0 287 62.4
Lj6A811T79 Lonicera japonica HOM05D006540 ORTHO05D008202 6.6e-86 321.6 282 62.8
Rhsim12G0110600 Rhododendron simsii HOM05D006540 ORTHO05D008202 6.6e-86 321.6 298 60.1
CSS0000303 Camellia sinensis var. sinensis HOM05D006540 ORTHO05D008202 1.1e-85 320.9 195 80.5
PGSC0003DMG400018605 Solanum tuberosum HOM05D006540 ORTHO05D008202 1.1e-85 320.9 320 57.5
FAN07G1259 Fragaria x ananassa HOM05D006540 ORTHO05D008202 2.5e-85 319.7 284 61.6
CANSAT35G0572 Cannabis sativa HOM05D006540 ORTHO05D008202 4.3e-85 318.9 236 71.6
FAN22G2305 Fragaria x ananassa HOM05D006540 ORTHO05D008202 4.3e-85 318.9 284 61.6
Thecc.02G259400 Theobroma cacao HOM05D006540 ORTHO05D008202 4.3e-85 318.9 194 82.0
arahy.Tifrunner.gnm1.ann1.NX3C69 Arachis hypogaea HOM05D006540 ORTHO05D008202 5.6e-85 318.5 294 59.2
BcaC06g33900 Brassica carinata HOM05D006540 ORTHO05D008202 5.6e-85 318.5 325 55.4
Dinv24788 Davidia involucrata HOM05D006540 ORTHO05D008202 5.6e-85 318.5 291 60.5
Thhalv10004491m.g Eutrema salsugineum HOM05D006540 ORTHO05D008202 5.6e-85 318.5 299 59.5
arahy.Tifrunner.gnm1.ann1.LD9JWE Arachis hypogaea HOM05D006540 ORTHO05D008202 7.3e-85 318.2 294 59.2
FAN17G1845 Fragaria x ananassa HOM05D006540 ORTHO05D008202 7.3e-85 318.2 284 61.3
Ciclev10032003m.g Citrus clementina HOM05D006540 ORTHO05D008202 9.5e-85 317.8 276 63.0
Gohir.A01G159600 Gossypium hirsutum HOM05D006540 ORTHO05D008202 1.2e-84 317.4 195 80.5
A06p41910 Brassica napus HOM05D006540 ORTHO05D008202 2.8e-84 316.2 329 55.3
BraA06t27110Z Brassica rapa HOM05D006540 ORTHO05D008202 2.8e-84 316.2 329 55.3
FvH4_4g25530 Fragaria vesca HOM05D006540 ORTHO05D008202 2.8e-84 316.2 284 60.9
FAN12G0822 Fragaria x ananassa HOM05D006540 ORTHO05D008202 2.8e-84 316.2 284 60.9
CARHR147570 Cardamine hirsuta HOM05D006540 ORTHO05D008202 3.6e-84 315.8 332 55.7
Peaxi162Scf00128g00138 Petunia axillaris HOM05D006540 ORTHO05D008202 4.7e-84 315.5 248 66.1
AL5G15370 Arabidopsis lyrata HOM05D006540 ORTHO05D008202 8.1e-84 314.7 327 56.0
vmacro01127 Vaccinium macrocarpon HOM05D006540 ORTHO05D008202 8.1e-84 314.7 297 57.2
Gohir.D01G150500 Gossypium hirsutum HOM05D006540 ORTHO05D008202 1.1e-83 314.3 291 60.8
Gorai.002G186600 Gossypium raimondii HOM05D006540 ORTHO05D008202 1.1e-83 314.3 291 60.8
GSVIVG01004073001 Vitis vinifera HOM05D006540 ORTHO05D008202 1.8e-83 313.5 195 76.9
Sp2g15690 Schrenkiella parvula HOM05D006540 ORTHO05D008202 4.0e-83 312.4 298 59.1
C07p35560 Brassica napus HOM05D006540 ORTHO05D008202 8.9e-83 311.2 325 54.5
BolC7t44080H Brassica oleracea HOM05D006540 ORTHO05D008202 8.9e-83 311.2 325 54.5
Manes.13G024900 Manihot esculenta HOM05D006540 ORTHO05D008202 1.2e-82 310.8 288 60.8
AT3G26580 Arabidopsis thaliana HOM05D006540 ORTHO05D008202 1.5e-82 310.5 328 55.5
Ah.03g133040 Amaranthus hybridus HOM05D006540 ORTHO05D008202 2.0e-82 310.1 286 60.5
Duzib248G0112 Durio zibethinus HOM05D006540 ORTHO05D008202 7.5e-82 308.1 279 63.1
ECA233G5619 Erigeron canadensis HOM05D006540 ORTHO05D008202 7.5e-82 308.1 253 64.0
Aqoxy3G01202 Aquilegia oxysepala HOM05D006540 ORTHO05D008202 1.3e-81 307.4 275 61.1
BcaC06g31063 Brassica carinata HOM05D006540 ORTHO05D008202 2.9e-81 306.2 329 56.2
Actinidia15092 Actinidia chinensis HOM05D006540 ORTHO05D008202 3.7e-81 305.8 301 59.5
Nitab4.5_0000007g0060 Nicotiana tabacum HOM05D006540 ORTHO05D008202 3.7e-81 305.8 291 59.8
Nitab4.5_0003628g0010 Nicotiana tabacum HOM05D006540 ORTHO05D008202 4.9e-81 305.4 293 59.0
AUR62024282 Chenopodium quinoa HOM05D006540 ORTHO05D008202 6.4e-81 305.1 218 72.0
Medtr8g069450 Medicago truncatula HOM05D006540 ORTHO05D008202 8.3e-81 304.7 267 63.3
THA.LOC104825662 Tarenaya hassleriana HOM05D006540 ORTHO05D008202 1.1e-80 304.3 324 54.0
DCAR_024432 Daucus carota HOM05D006540 ORTHO05D008202 1.4e-80 303.9 250 64.8
Lalb_Chr05g0228421 Lupinus albus HOM05D006540 ORTHO05D008202 2.4e-80 303.1 262 61.8
TWI18G0987 Tripterygium wilfordii HOM05D006540 ORTHO05D008202 1.6e-79 300.4 286 59.8
COL.COLO4_24263 Corchorus olitorius HOM05D006540 ORTHO05D008202 2.1e-79 300.1 199 75.4
Carub.0005s0457 Capsella rubella HOM05D006540 ORTHO05D008202 1.1e-77 294.3 326 52.8
Psat4g116680 Pisum sativum HOM05D006540 ORTHO05D008202 2.5e-77 293.1 275 61.8
MBI10_g13027_MAGBIO Magnolia biondii HOM05D006540 ORTHO05D008202 3.3e-77 292.7 313 57.8
CAN.G832.5 Capsicum annuum HOM05D006540 ORTHO05D008202 2.1e-76 290.0 270 60.7
HanXRQChr08g0208131 Helianthus annuus HOM05D006540 ORTHO05D008202 2.1e-76 290.0 192 72.4
AUR62005459 Chenopodium quinoa HOM05D006540 ORTHO05D008202 2.8e-76 289.7 218 68.3
Lsat_1_v5_gn_8_152220 Lactuca sativa HOM05D006540 ORTHO05D008202 2.8e-76 289.7 243 63.8
Sopen05g008320 Solanum pennellii HOM05D006540 ORTHO05D008202 4.7e-76 288.9 299 55.2
Haze_12245 Corylus avellana HOM05D006540 ORTHO05D008202 6.2e-76 288.5 299 56.2
unitig_21.g20872 Utricularia gibba HOM05D006540 ORTHO05D008202 1.4e-75 287.3 290 55.2
QL03p058139 Quercus lobata HOM05D006540 ORTHO05D008202 1.5e-74 283.9 303 53.5
PSO478G4529 Papaver somniferum HOM05D006540 ORTHO05D008202 9.9e-74 281.2 258 62.0
Sc04g0009450 Simmondsia chinensis HOM05D006540 ORTHO05D008202 1.6e-71 273.9 277 55.2
Rhsim12G0041000 Rhododendron simsii HOM05D006540 ORTHO05D008202 1.1e-69 267.7 326 49.7
HPP92_002022 Vanilla planifolia HOM05D006540 ORTHO05D008202 4.3e-69 265.8 265 54.3
VMungo0251G1250 Vigna mungo HOM05D006540 ORTHO05D008202 2.2e-65 253.4 198 71.7
TPR.G17765 Trifolium pratense HOM05D006540 ORTHO05D008202 4.2e-64 249.2 269 56.9
BcaB01g00564 Brassica carinata HOM05D006540 ORTHO05D008202 1.2e-63 247.7 248 58.5
Os03g0428800 Oryza sativa ssp. japonica HOM05D006540 ORTHO05D008202 6.6e-62 241.9 201 63.7
MELO3C011955.2 Cucumis melo HOM05D006540 ORTHO05D008202 1.4e-59 234.2 167 78.4
CsaV3_5G031170 Cucumis sativus L. HOM05D006540 ORTHO05D008202 9.0e-59 231.5 136 88.2
TAR374G0845 Trochodendron aralioides HOM05D006540 ORTHO05D008202 3.4e-58 229.6 125 93.6
Zm00001eb096140 Zea mays HOM05D006540 ORTHO05D008202 3.5e-55 219.5 241 53.1
AagrBONN_evm.TU.Sc2ySwM_340.367 Anthoceros agrestis HOM05D006540 ORTHO05D008202 6.0e-55 218.8 250 48.0
Sed0005489 Sechium edule HOM05D006540 ORTHO05D008202 1.3e-52 211.1 221 62.4
SEGI_37038 Sequoiadendron giganteum HOM05D006540 ORTHO05D008202 1.1e-51 208.0 173 57.2
Mapoly0037s0067 Marchantia polymorpha HOM05D006540 ORTHO05D008202 1.3e-49 201.1 246 45.9
Pp3c27_6670 Physcomitrium patens HOM05D006540 ORTHO05D008202 1.1e-45 188.0 193 48.2
SMO347G0417 Selaginella moellendorffii HOM05D006540 ORTHO05D008202 7.4e-45 185.3 243 45.7
CBR_g8379 Chara braunii HOM05D006540 ORTHO05D008202 7.4e-21 105.5 137 43.1
BcaC06g33898 Brassica carinata HOM05D006540 ORTHO05D008202 2.8e-20 103.6 82 57.3
Cre12.g528050 Chlamydomonas reinhardtii HOM05D006540 ORTHO05D008202 6.9e-19 99.0 162 37.0
PRCOL_00004949 Prasinoderma coloniale HOM05D006540 ORTHO05D008202 6.5e-17 92.4 205 32.2
MCO07G599 Micromonas commoda HOM05D006540 ORTHO05D008202 8.5e-17 92.0 194 34.0
RcHm_v2.0_Chr5g0067811 Rosa chinensis HOM05D006540 ORTHO05D008202 4.2e-16 89.7 60 80.0
QL04p066147 Quercus lobata HOM05D006540 ORTHO05D008202 9.7e-13 78.6 52 80.8
Oeu029879.1 Olea europaea HOM05D006540 ORTHO05D008202 2.8e-12 77.0 72 50.0
unitig_744.g24293 Utricularia gibba HOM05D006540 ORTHO05D008202 4.5e-10 69.7 44 68.2


User provided reference genes

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