Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0686G184 Amborella trichopoda HOM05D000025 ORTHO05D063902 6.1e-58 227.3 114 100.0
ATR0425G001 Amborella trichopoda HOM05D000025 ORTHO05D000136 2.4e-17 92.4 91 53.8
TAR374G1618 Trochodendron aralioides HOM05D000025 ORTHO05D000040 6.2e-10 67.8 91 36.3
vmacro23143 Vaccinium macrocarpon HOM05D000025 ORTHO05D000040 8.1e-10 67.4 91 38.5
Actinidia36760 Actinidia chinensis HOM05D000025 ORTHO05D000040 1.4e-09 66.6 91 38.5
vmacro16679 Vaccinium macrocarpon HOM05D000025 ORTHO05D000040 1.4e-09 66.6 91 38.5
TAR374G0619 Trochodendron aralioides HOM05D000025 ORTHO05D000040 2.4e-09 65.9 91 35.2
FAN04G0124 Fragaria x ananassa HOM05D000025 ORTHO05D000040 3.1e-09 65.5 91 38.5
Hund05605 Selenicereus undatus HOM05D000025 ORTHO05D000040 3.1e-09 65.5 91 36.3
CSS0031608 Camellia sinensis var. sinensis HOM05D000025 ORTHO05D000040 4.0e-09 65.1 91 37.4
Oeu053485.1 Olea europaea HOM05D000025 ORTHO05D000040 4.0e-09 65.1 91 37.4
Duzib205G2014 Durio zibethinus HOM05D000025 ORTHO05D000040 5.3e-09 64.7 92 39.1
CSS0003805 Camellia sinensis var. sinensis HOM05D000025 ORTHO05D000040 9.0e-09 63.9 91 37.4
Sabra12G0064800 Salix brachista HOM05D000025 ORTHO05D000040 9.0e-09 63.9 91 36.3
MD14G1168600 Malus domestica HOM05D000025 ORTHO05D000040 1.2e-08 63.5 91 36.3
Duzib205G0272 Durio zibethinus HOM05D000025 ORTHO05D000040 1.5e-08 63.2 92 38.0
FvH4_5g06600 Fragaria vesca HOM05D000025 ORTHO05D000040 1.5e-08 63.2 91 37.4
ATR0122G018 Amborella trichopoda HOM05D000025 ORTHO05D000040 2.0e-08 62.8 90 35.6
Hma1.2p1_0046F.1_g027290 Hydrangea macrophylla HOM05D000025 ORTHO05D000040 2.0e-08 62.8 91 36.3
Atru.chr9.2619 Acer truncatum HOM05D000025 ORTHO05D000040 2.6e-08 62.4 91 36.3
Duzib205G1957 Durio zibethinus HOM05D000025 ORTHO05D000040 2.6e-08 62.4 92 38.0
Dinv11136 Davidia involucrata HOM05D000025 ORTHO05D000040 3.4e-08 62.0 91 39.6
FAN08G2511 Fragaria x ananassa HOM05D000025 ORTHO05D000040 4.5e-08 61.6 91 36.3
Hma1.2p1_0046F.1_g027420 Hydrangea macrophylla HOM05D000025 ORTHO05D000040 4.5e-08 61.6 91 34.1
Potri.012G090000 Populus trichocarpa HOM05D000025 ORTHO05D000040 4.5e-08 61.6 91 35.2
RcHm_v2.0_Chr7g0192161 Rosa chinensis HOM05D000025 ORTHO05D000040 4.5e-08 61.6 91 37.4
Nn3g16665 Nelumbo nucifera HOM05D000025 ORTHO05D000040 5.8e-08 61.2 100 35.0
Potri.012G089900 Populus trichocarpa HOM05D000025 ORTHO05D000040 5.8e-08 61.2 84 36.9
TAR374G1352 Trochodendron aralioides HOM05D000025 ORTHO05D000040 5.8e-08 61.2 90 35.6
ATR0122G029 Amborella trichopoda HOM05D000025 ORTHO05D000136 9.9e-08 60.5 93 35.5
ATR0153G005 Amborella trichopoda HOM05D000025 ORTHO05D000040 9.9e-08 60.5 96 36.5
ATR0382G001 Amborella trichopoda HOM05D000025 ORTHO05D000040 9.9e-08 60.5 91 38.5
Haze_07616 Corylus avellana HOM05D000025 ORTHO05D000040 9.9e-08 60.5 91 35.2
Cfa019256 Carpinus fangiana HOM05D000025 ORTHO05D000040 1.7e-07 59.7 92 37.0
CiPaw.11G016900 Carya illinoinensis HOM05D000025 ORTHO05D000040 1.7e-07 59.7 91 33.0
Eucgr.L03212 Eucalyptus grandis HOM05D000025 ORTHO05D000040 1.7e-07 59.7 91 34.1
Cfa019258 Carpinus fangiana HOM05D000025 ORTHO05D000040 2.2e-07 59.3 91 35.2
Sabra15G0108900 Salix brachista HOM05D000025 ORTHO05D000040 2.2e-07 59.3 91 34.1
EL10Ac7g18023 Beta vulgaris HOM05D000025 ORTHO05D000040 2.9e-07 58.9 91 33.0
PSO675G8015 Papaver somniferum HOM05D000025 ORTHO05D000136 2.9e-07 58.9 97 32.0
Potri.015G086000 Populus trichocarpa HOM05D000025 ORTHO05D000040 2.9e-07 58.9 91 33.0
QL10p006243 Quercus lobata HOM05D000025 ORTHO05D000040 2.9e-07 58.9 91 33.0
Cfa019232 Carpinus fangiana HOM05D000434 ORTHO05D007220 3.8e-07 58.5 109 35.8
AUR62022100 Chenopodium quinoa HOM05D000025 ORTHO05D000040 3.8e-07 58.5 91 31.9
Eucgr.B00195 Eucalyptus grandis HOM05D000025 ORTHO05D000040 3.8e-07 58.5 91 35.2
Eucgr.L03100 Eucalyptus grandis HOM05D000025 ORTHO05D000040 3.8e-07 58.5 91 35.2
Lalb_Chr11g0069831 Lupinus albus HOM05D000025 ORTHO05D000136 3.8e-07 58.5 91 38.5
TWI23G0986 Tripterygium wilfordii HOM05D000025 ORTHO05D000040 3.8e-07 58.5 92 33.7
Ciclev10023549m.g Citrus clementina HOM05D000025 ORTHO05D000040 4.9e-07 58.2 91 35.2
Eucgr.B00196 Eucalyptus grandis HOM05D000025 ORTHO05D000040 4.9e-07 58.2 91 35.2
QL03p060394 Quercus lobata HOM05D000025 ORTHO05D000040 4.9e-07 58.2 91 34.1
Thecc.03G117200 Theobroma cacao HOM05D000025 ORTHO05D000040 6.4e-07 57.8 92 34.8
COL.COLO4_27487 Corchorus olitorius HOM05D000025 ORTHO05D034636 8.4e-07 57.4 92 34.8
Eucgr.B00198 Eucalyptus grandis HOM05D000025 ORTHO05D000040 8.4e-07 57.4 91 34.1
Eucgr.B00203 Eucalyptus grandis HOM05D000025 ORTHO05D000040 8.4e-07 57.4 91 34.1
Glyma.06G176100 Glycine max HOM05D000025 ORTHO05D000040 8.4e-07 57.4 88 36.4
QL10p006543 Quercus lobata HOM05D000025 ORTHO05D000040 8.4e-07 57.4 78 41.0
Manes.03G139848 Manihot esculenta HOM05D000025 ORTHO05D000136 1.1e-06 57.0 96 32.3
Nitab4.5_0003352g0010 Nicotiana tabacum HOM05D000025 ORTHO05D000136 1.1e-06 57.0 105 29.5
ATR0827G072 Amborella trichopoda HOM05D000025 ORTHO05D000136 1.4e-06 56.6 92 32.6
Aqoxy3G01278 Aquilegia oxysepala HOM05D000025 ORTHO05D000040 1.4e-06 56.6 91 33.0
Eucgr.B00187 Eucalyptus grandis HOM05D000025 ORTHO05D000040 1.4e-06 56.6 88 35.2
Rhsim01G0114200 Rhododendron simsii HOM05D008700 ORTHO05D010645 1.4e-06 56.6 97 36.1
arahy.Tifrunner.gnm1.ann1.B3J73C Arachis hypogaea HOM05D000025 ORTHO05D000040 1.9e-06 56.2 78 39.7
arahy.Tifrunner.gnm1.ann1.U51SK2 Arachis hypogaea HOM05D000025 ORTHO05D000040 1.9e-06 56.2 80 40.0
CiPaw.11G017600 Carya illinoinensis HOM05D000025 ORTHO05D000040 1.9e-06 56.2 87 35.6
AUR62001220 Chenopodium quinoa HOM05D000025 ORTHO05D000040 1.9e-06 56.2 91 30.8
Haze_07711 Corylus avellana HOM05D000025 ORTHO05D000040 1.9e-06 56.2 86 36.0
Lj1g0009676 Lotus japonicus HOM05D000025 ORTHO05D000040 1.9e-06 56.2 91 31.9
Medtr3g076550 Medicago truncatula HOM05D000025 ORTHO05D000040 1.9e-06 56.2 91 31.9
QL10p006449 Quercus lobata HOM05D000025 ORTHO05D000040 1.9e-06 56.2 91 35.2
CiPaw.11G016300 Carya illinoinensis HOM05D000025 ORTHO05D000040 2.4e-06 55.8 91 34.1
Cc04_g11200 Coffea canephora HOM05D000025 ORTHO05D000040 2.4e-06 55.8 91 35.2
Haze_07600 Corylus avellana HOM05D000025 ORTHO05D000040 2.4e-06 55.8 89 37.1
Haze_07604 Corylus avellana HOM05D000025 ORTHO05D000040 2.4e-06 55.8 86 37.2
Eucgr.B00202 Eucalyptus grandis HOM05D000025 ORTHO05D000040 2.4e-06 55.8 91 31.9
Eucgr.B00208 Eucalyptus grandis HOM05D000025 ORTHO05D000040 2.4e-06 55.8 91 31.9
QL10p006233 Quercus lobata HOM05D000025 ORTHO05D000040 2.4e-06 55.8 91 31.9
Cfa019245 Carpinus fangiana HOM05D000025 ORTHO05D000040 3.2e-06 55.5 82 35.4
Cfa019246 Carpinus fangiana HOM05D000025 ORTHO05D000040 3.2e-06 55.5 82 35.4
Manes.03G138850 Manihot esculenta HOM05D000025 ORTHO05D000136 3.2e-06 55.5 96 31.2
Manes.15G062100 Manihot esculenta HOM05D000025 ORTHO05D000136 3.2e-06 55.5 96 32.3
Thecc.07G017700 Theobroma cacao HOM05D000025 ORTHO05D000136 3.2e-06 55.5 96 34.4
CiPaw.11G017900 Carya illinoinensis HOM05D000025 ORTHO05D000040 4.2e-06 55.1 88 34.1
DCAR_016444 Daucus carota HOM05D000025 ORTHO05D000040 4.2e-06 55.1 84 33.3
Cc04_g11190 Coffea canephora HOM05D000025 ORTHO05D000040 5.5e-06 54.7 86 40.7
Nitab4.5_0001182g0070 Nicotiana tabacum HOM05D000025 ORTHO05D000136 5.5e-06 54.7 93 33.3
Thecc.07G017400 Theobroma cacao HOM05D000025 ORTHO05D000136 5.5e-06 54.7 98 31.6
ATR0199G003 Amborella trichopoda HOM05D000025 ORTHO05D000040 7.1e-06 54.3 85 38.8
CiPaw.11G016600 Carya illinoinensis HOM05D000025 ORTHO05D000040 7.1e-06 54.3 91 33.0
Gohir.D03G102000 Gossypium hirsutum HOM05D000025 ORTHO05D000040 7.1e-06 54.3 93 35.5
Gorai.003G107400 Gossypium raimondii HOM05D000025 ORTHO05D000040 7.1e-06 54.3 93 35.5
Lalb_Chr13g0297511 Lupinus albus HOM05D000025 ORTHO05D000040 7.1e-06 54.3 92 34.8
Lalb_Chr13g0297531 Lupinus albus HOM05D000025 ORTHO05D000040 7.1e-06 54.3 92 34.8
Manes.03G138853 Manihot esculenta HOM05D000025 ORTHO05D000136 7.1e-06 54.3 96 29.2
Peaxi162Scf00185g00159 Petunia axillaris HOM05D000025 ORTHO05D000136 7.1e-06 54.3 101 31.7
QL10p006495 Quercus lobata HOM05D000025 ORTHO05D000040 7.1e-06 54.3 89 31.5
arahy.Tifrunner.gnm1.ann1.9FKG6V Arachis hypogaea HOM05D000025 ORTHO05D000040 9.3e-06 53.9 78 37.2
CAN.G809.24 Capsicum annuum HOM05D000025 ORTHO05D000136 9.3e-06 53.9 95 35.8
Haze_04868 Corylus avellana HOM05D000025 ORTHO05D000040 9.3e-06 53.9 83 33.7
QL10p006422 Quercus lobata HOM05D000025 ORTHO05D000040 9.3e-06 53.9 82 34.1
Thecc.07G017500 Theobroma cacao HOM05D000025 ORTHO05D000136 9.3e-06 53.9 98 30.6
TWI38G0586 Tripterygium wilfordii HOM05D000025 ORTHO05D000136 9.3e-06 53.9 95 31.6


User provided reference genes

Program Settings