Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0686G174 Amborella trichopoda HOM05D007857 ORTHO05D009355 2.2e-140 502.3 258 100.0
TAR374G0584 Trochodendron aralioides HOM05D007857 ORTHO05D009355 3.6e-21 106.3 271 32.5
Ca_18058_v3 Cicer arietinum L. HOM05D007857 ORTHO05D009355 4.2e-14 82.8 253 28.1
Dinv10979 Davidia involucrata HOM05D007857 ORTHO05D009355 4.2e-14 82.8 264 27.7
QL03p054319 Quercus lobata HOM05D007857 ORTHO05D009355 2.1e-13 80.5 246 28.0
TPR.G17074 Trifolium pratense HOM05D007857 ORTHO05D009355 2.7e-13 80.1 95 42.1
Ciclev10033758m.g Citrus clementina HOM05D007857 ORTHO05D009355 8.8e-12 75.1 274 27.4
MBI11_g31349_MAGBIO Magnolia biondii HOM05D007857 ORTHO05D009355 1.2e-11 74.7 216 27.3
TAR622G0135 Trochodendron aralioides HOM05D007857 ORTHO05D009355 2.0e-11 73.9 102 42.2
Dinv14814 Davidia involucrata HOM05D007857 ORTHO05D009355 2.6e-11 73.6 250 28.8
Sc04g0010010 Simmondsia chinensis HOM05D007857 ORTHO05D009355 5.7e-11 72.4 263 28.1
Nn4g22377 Nelumbo nucifera HOM05D007857 ORTHO05D009355 9.8e-11 71.6 94 39.4
DCAR_031188 Daucus carota HOM05D007857 ORTHO05D009355 1.3e-10 71.2 248 26.6
TWI75G0924 Tripterygium wilfordii HOM05D007857 ORTHO05D009355 1.3e-10 71.2 254 29.5
PSO782G1056 Papaver somniferum HOM05D007857 ORTHO05D009355 1.7e-10 70.9 101 41.6
Thecc.02G276200 Theobroma cacao HOM05D007857 ORTHO05D009355 1.7e-10 70.9 259 27.8
Medtr8g080270 Medicago truncatula HOM05D007857 ORTHO05D009355 2.2e-10 70.5 262 27.1
Rhsim12G0103100 Rhododendron simsii HOM05D007857 ORTHO05D009355 2.2e-10 70.5 277 28.2
CSS0005757 Camellia sinensis var. sinensis HOM05D007857 ORTHO05D009355 6.3e-10 68.9 254 29.9
MD16G1115600 Malus domestica HOM05D007857 ORTHO05D009355 6.3e-10 68.9 77 44.2
Haze_12382 Corylus avellana HOM05D007857 ORTHO05D009355 8.3e-10 68.6 244 26.6
CiPaw.06G100500 Carya illinoinensis HOM05D007857 ORTHO05D009355 1.1e-09 68.2 75 41.3
Psat7g078480 Pisum sativum HOM05D007857 ORTHO05D009355 1.1e-09 68.2 259 25.9
Hma1.2p1_1239F.1_g269420 Hydrangea macrophylla HOM05D007857 ORTHO05D009355 1.4e-09 67.8 160 30.0
Aqoxy5G03443 Aquilegia oxysepala HOM05D007857 ORTHO05D009355 1.8e-09 67.4 252 28.2
Cfa009341 Carpinus fangiana HOM05D007857 ORTHO05D009355 1.8e-09 67.4 244 25.8
RcHm_v2.0_Chr4g0430861 Rosa chinensis HOM05D007857 ORTHO05D009355 3.1e-09 66.6 74 39.2
FvH4_4g24090 Fragaria vesca HOM05D007857 ORTHO05D009355 7.0e-09 65.5 77 40.3
Prupe.1G231500 Prunus persica HOM05D007857 ORTHO05D009355 9.1e-09 65.1 257 28.0
Lalb_Chr07g0187361 Lupinus albus HOM05D007857 ORTHO05D009355 1.2e-08 64.7 251 25.9
TWI36G0032 Tripterygium wilfordii HOM05D007857 ORTHO05D009355 1.6e-08 64.3 72 41.7
TWI36G1497 Tripterygium wilfordii HOM05D007857 ORTHO05D009355 1.6e-08 64.3 72 41.7
FAN07G0728 Fragaria x ananassa HOM05D007857 ORTHO05D009355 2.0e-08 63.9 77 39.0
MD13G1115600 Malus domestica HOM05D007857 ORTHO05D009355 2.0e-08 63.9 77 39.0
Actinidia20693 Actinidia chinensis HOM05D007857 ORTHO05D009355 2.7e-08 63.5 270 25.6
Glyma.03G186400 Glycine max HOM05D007857 ORTHO05D009355 2.7e-08 63.5 91 38.5
Eucgr.H04657 Eucalyptus grandis HOM05D007857 ORTHO05D009355 4.5e-08 62.8 261 26.8
FAN12G2990 Fragaria x ananassa HOM05D007857 ORTHO05D009355 4.5e-08 62.8 77 39.0
Lj4g0021592 Lotus japonicus HOM05D007857 ORTHO05D009355 4.5e-08 62.8 273 26.4
Oeu020304.1 Olea europaea HOM05D001334 ORTHO05D001119 4.5e-08 62.8 205 29.3
COL.COLO4_20347 Corchorus olitorius HOM05D007857 ORTHO05D009355 5.9e-08 62.4 102 34.3
Solyc04g045390.1 Solanum lycopersicum HOM05D007857 ORTHO05D009355 7.7e-08 62.0 99 35.4
Glyma.05G146200 Glycine max HOM05D007857 ORTHO05D009355 1.0e-07 61.6 259 25.9
PSO063G0898 Papaver somniferum HOM05D007857 ORTHO05D009355 1.0e-07 61.6 263 27.0
CANSAT01G1499 Cannabis sativa HOM05D007857 ORTHO05D009355 1.7e-07 60.8 73 41.1
Cpa.g.sc43.26 Carica papaya HOM05D007857 ORTHO05D009355 1.7e-07 60.8 271 26.6
Gohir.D02G151200 Gossypium hirsutum HOM05D007857 ORTHO05D009355 1.7e-07 60.8 114 33.3
Gorai.005G169600 Gossypium raimondii HOM05D007857 ORTHO05D009355 1.7e-07 60.8 114 33.3
ECA233G3449 Erigeron canadensis HOM05D007857 ORTHO05D009355 2.9e-07 60.1 229 28.4
Glyma.19G186500 Glycine max HOM05D007857 ORTHO05D009355 2.9e-07 60.1 73 42.5
Aqoxy3G01489 Aquilegia oxysepala HOM05D007857 ORTHO05D009355 3.8e-07 59.7 65 40.0
Atru.chr11.2290 Acer truncatum HOM05D007857 ORTHO05D009355 5.0e-07 59.3 263 27.0
Cc11_g16750 Coffea canephora HOM05D007857 ORTHO05D009355 5.0e-07 59.3 52 53.8
VMungo0251G2942 Vigna mungo HOM05D007857 ORTHO05D009355 8.5e-07 58.5 105 32.4
Sed0017756 Sechium edule HOM05D007857 ORTHO05D009355 1.1e-06 58.2 273 24.9
CsaV3_2G025390 Cucumis sativus L. HOM05D007857 ORTHO05D009355 1.5e-06 57.8 111 31.5
Gohir.A03G127600 Gossypium hirsutum HOM05D007857 ORTHO05D009355 1.9e-06 57.4 114 31.6
Manes.13G017400 Manihot esculenta HOM05D007857 ORTHO05D009355 2.5e-06 57.0 174 31.6
Lsat_1_v5_gn_8_149921 Lactuca sativa HOM05D007857 ORTHO05D009355 3.2e-06 56.6 218 25.7
ClCG08G017230 Citrullus lanatus HOM05D007857 ORTHO05D009355 7.2e-06 55.5 312 24.0
PSO357G0688 Papaver somniferum HOM05D007857 ORTHO05D009355 7.2e-06 55.5 134 32.8
Sabra10G0047600 Salix brachista HOM05D007857 ORTHO05D009355 9.4e-06 55.1 300 27.7


User provided reference genes

Program Settings