Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0686G167 Amborella trichopoda HOM05D006407 ORTHO05D008079 2.7e-197 691.8 355 100.0
CiPaw.14G043600 Carya illinoinensis HOM05D006407 ORTHO05D008079 1.8e-140 503.1 347 74.6
Cfa010568 Carpinus fangiana HOM05D006407 ORTHO05D008079 4.4e-139 498.4 345 74.8
Haze_03500 Corylus avellana HOM05D006407 ORTHO05D008079 4.4e-139 498.4 343 74.3
Dinv28811 Davidia involucrata HOM05D006407 ORTHO05D008079 4.4e-139 498.4 351 72.9
TAR636G1997 Trochodendron aralioides HOM05D006407 ORTHO05D008079 4.9e-138 495.0 346 74.6
Aqoxy2G03962 Aquilegia oxysepala HOM05D006407 ORTHO05D008079 6.0e-136 488.0 353 72.2
Actinidia30017 Actinidia chinensis HOM05D006407 ORTHO05D008079 6.6e-135 484.6 356 71.6
GSVIVG01006226001 Vitis vinifera HOM05D006407 ORTHO05D008079 6.6e-135 484.6 319 77.4
CSS0030734 Camellia sinensis var. sinensis HOM05D006407 ORTHO05D008079 1.6e-133 479.9 359 69.6
THA.LOC104802645 Tarenaya hassleriana HOM05D006407 ORTHO05D008079 1.6e-133 479.9 349 70.8
QL09p046404 Quercus lobata HOM05D006407 ORTHO05D008079 2.1e-133 479.6 355 69.6
CSS0036527 Camellia sinensis var. sinensis HOM05D006407 ORTHO05D008079 2.8e-133 479.2 359 69.6
Sc17g0001660 Simmondsia chinensis HOM05D006407 ORTHO05D008079 2.8e-133 479.2 350 72.0
PGR083G0415 Punica granatum HOM05D006407 ORTHO05D008079 3.6e-133 478.8 345 71.0
Ciclev10015489m.g Citrus clementina HOM05D006407 ORTHO05D008079 4.8e-133 478.4 349 71.1
Eucgr.H00725 Eucalyptus grandis HOM05D006407 ORTHO05D008079 8.1e-133 477.6 350 70.0
Ah.11g051020 Amaranthus hybridus HOM05D006407 ORTHO05D008079 1.4e-132 476.9 350 70.3
Gorai.N003300 Gossypium raimondii HOM05D006407 ORTHO05D008079 4.0e-132 475.3 348 70.4
Thecc.01G211000 Theobroma cacao HOM05D006407 ORTHO05D008079 5.3e-132 474.9 348 71.0
AL8G21320 Arabidopsis lyrata HOM05D006407 ORTHO05D008079 9.0e-132 474.2 351 68.4
Cpa.g.sc8.72 Carica papaya HOM05D006407 ORTHO05D008079 1.5e-131 473.4 355 68.2
BcaC04g23774 Brassica carinata HOM05D006407 ORTHO05D008079 2.6e-131 472.6 351 68.4
BolC9t53411H Brassica oleracea HOM05D006407 ORTHO05D008079 2.6e-131 472.6 351 68.4
Manes.12G054200 Manihot esculenta HOM05D006407 ORTHO05D008079 2.6e-131 472.6 345 70.7
CARHR183610 Cardamine hirsuta HOM05D006407 ORTHO05D008079 4.5e-131 471.9 351 68.4
C09p04840 Brassica napus HOM05D006407 ORTHO05D008079 5.8e-131 471.5 351 68.1
Carub.0008s0805 Capsella rubella HOM05D006407 ORTHO05D008079 5.8e-131 471.5 352 68.2
PSO675G1275 Papaver somniferum HOM05D006407 ORTHO05D008079 7.6e-131 471.1 344 72.1
AT5G48470 Arabidopsis thaliana HOM05D006407 ORTHO05D008079 9.9e-131 470.7 351 67.8
CsaV3_7G026830 Cucumis sativus L. HOM05D006407 ORTHO05D008079 2.2e-130 469.5 348 68.1
PSO017G7241 Papaver somniferum HOM05D006407 ORTHO05D008079 2.9e-130 469.2 342 71.9
Sed0008140 Sechium edule HOM05D006407 ORTHO05D008079 2.9e-130 469.2 346 69.1
Aa31sc527G10 Aethionema arabicum HOM05D006407 ORTHO05D008079 3.8e-130 468.8 351 68.1
A09p04530 Brassica napus HOM05D006407 ORTHO05D008079 4.9e-130 468.4 351 67.5
BraA09t36088Z Brassica rapa HOM05D006407 ORTHO05D008079 4.9e-130 468.4 351 67.5
CANSAT01G1280 Cannabis sativa HOM05D006407 ORTHO05D008079 6.4e-130 468.0 347 69.7
Hma1.2p1_0161F.1_g071410 Hydrangea macrophylla HOM05D006407 ORTHO05D008079 6.4e-130 468.0 354 68.9
BcaB04g19579 Brassica carinata HOM05D006407 ORTHO05D008079 1.1e-129 467.2 351 67.5
Thhalv10004357m.g Eutrema salsugineum HOM05D006407 ORTHO05D008079 1.1e-129 467.2 351 67.5
Gohir.A07G159200 Gossypium hirsutum HOM05D006407 ORTHO05D008079 1.9e-129 466.5 348 70.1
RcHm_v2.0_Chr6g0282821 Rosa chinensis HOM05D006407 ORTHO05D008079 1.9e-129 466.5 341 70.4
ClCG09G008210 Citrullus lanatus HOM05D006407 ORTHO05D008079 2.4e-129 466.1 348 67.8
MSTRG.18495 Avicennia marina HOM05D006407 ORTHO05D008079 5.4e-129 464.9 348 70.7
Peaxi162Scf00335g00087 Petunia axillaris HOM05D006407 ORTHO05D008079 5.4e-129 464.9 349 69.6
Prupe.8G190300 Prunus persica HOM05D006407 ORTHO05D008079 7.1e-129 464.5 351 68.9
TWI18G0256 Tripterygium wilfordii HOM05D006407 ORTHO05D008079 9.3e-129 464.2 354 66.9
Oeu057833.1 Olea europaea HOM05D006407 ORTHO05D008079 1.2e-128 463.8 329 72.9
Hund02795 Selenicereus undatus HOM05D006407 ORTHO05D008079 1.2e-128 463.8 350 69.7
TWI36G1400 Tripterygium wilfordii HOM05D006407 ORTHO05D008079 2.7e-128 462.6 358 66.5
Medtr1g007490 Medicago truncatula HOM05D006407 ORTHO05D008079 3.5e-128 462.2 340 70.6
FAN27G2095 Fragaria x ananassa HOM05D006407 ORTHO05D008079 6.0e-128 461.5 344 70.3
FAN27G3088 Fragaria x ananassa HOM05D006407 ORTHO05D008079 6.0e-128 461.5 344 70.3
Psat6g036520 Pisum sativum HOM05D006407 ORTHO05D008079 6.0e-128 461.5 340 70.0
PGSC0003DMG400013943 Solanum tuberosum HOM05D006407 ORTHO05D008079 6.0e-128 461.5 349 68.5
FAN15G1719 Fragaria x ananassa HOM05D006407 ORTHO05D008079 1.0e-127 460.7 349 69.3
FAN24G2889 Fragaria x ananassa HOM05D006407 ORTHO05D008079 1.8e-127 459.9 344 70.3
FvH4_2g17800 Fragaria vesca HOM05D006407 ORTHO05D008079 8.7e-127 457.6 344 70.1
Sopen09g019480 Solanum pennellii HOM05D006407 ORTHO05D008079 1.1e-126 457.2 349 68.2
HanXRQChr08g0231421 Helianthus annuus HOM05D006407 ORTHO05D008079 1.9e-126 456.4 362 67.7
ECA247G2281 Erigeron canadensis HOM05D006407 ORTHO05D008079 3.3e-126 455.7 353 68.3
Cc01_g16130 Coffea canephora HOM05D006407 ORTHO05D008079 4.3e-126 455.3 342 68.4
Potri.002G251400 Populus trichocarpa HOM05D006407 ORTHO05D008079 1.6e-125 453.4 347 67.7
MD10G1151900 Malus domestica HOM05D006407 ORTHO05D008079 2.1e-125 453.0 338 70.1
Sp2g18840 Schrenkiella parvula HOM05D006407 ORTHO05D008079 4.8e-125 451.8 329 69.9
AUR62008121 Chenopodium quinoa HOM05D006407 ORTHO05D008079 8.1e-125 451.1 369 64.8
Lj1g0005258 Lotus japonicus HOM05D006407 ORTHO05D008079 1.4e-124 450.3 341 69.5
Lsat_1_v5_gn_9_16300 Lactuca sativa HOM05D006407 ORTHO05D008079 2.4e-124 449.5 352 67.0
Solyc09g056160.4 Solanum lycopersicum HOM05D006407 ORTHO05D008079 4.0e-124 448.7 349 67.3
vmacro02816 Vaccinium macrocarpon HOM05D006407 ORTHO05D008079 4.0e-124 448.7 407 60.9
HPP92_024258 Vanilla planifolia HOM05D006407 ORTHO05D008079 4.0e-124 448.7 321 71.3
EL10Ac5g10625 Beta vulgaris HOM05D006407 ORTHO05D008079 1.2e-123 447.2 332 69.3
Rhsim13G0052700 Rhododendron simsii HOM05D006407 ORTHO05D008079 3.4e-123 445.7 337 69.1
arahy.Tifrunner.gnm1.ann1.FHDW0K Arachis hypogaea HOM05D006407 ORTHO05D008079 4.9e-122 441.8 343 65.6
arahy.Tifrunner.gnm1.ann1.Q8L9VW Arachis hypogaea HOM05D006407 ORTHO05D008079 4.9e-122 441.8 343 65.6
Zm00001eb169280 Zea mays HOM05D006407 ORTHO05D008079 1.1e-121 440.7 323 68.4
Migut.D00736 Erythranthe guttata HOM05D006407 ORTHO05D008079 1.6e-120 436.8 326 70.2
Ca_12772_v3 Cicer arietinum L. HOM05D006407 ORTHO05D008079 1.3e-119 433.7 297 75.1
Lj1C101T0 Lonicera japonica HOM05D006407 ORTHO05D008079 2.3e-119 433.0 349 65.0
Lalb_Chr07g0194511 Lupinus albus HOM05D006407 ORTHO05D008079 5.1e-119 431.8 346 66.2
COL.COLO4_26571 Corchorus olitorius HOM05D006407 ORTHO05D008079 6.7e-119 431.4 348 65.2
Glyma.16G083300 Glycine max HOM05D006407 ORTHO05D008079 1.1e-118 430.6 350 64.0
Glyma.03G089700 Glycine max HOM05D006407 ORTHO05D008079 3.3e-118 429.1 342 66.1
unitig_64.g29771 Utricularia gibba HOM05D006407 ORTHO05D008079 3.3e-118 429.1 321 68.8
Gohir.D07G167200 Gossypium hirsutum HOM05D006407 ORTHO05D008079 5.6e-118 428.3 348 65.8
Phvul.008G108300 Phaseolus vulgaris HOM05D006407 ORTHO05D008079 2.0e-115 419.9 341 64.2
SalBow6G2639 Salvia bowleyana HOM05D006407 ORTHO05D008079 1.0e-111 407.5 279 73.8
Nitab4.5_0000038g0130 Nicotiana tabacum HOM05D006407 ORTHO05D008079 3.0e-111 406.0 371 60.9
Nitab4.5_0003859g0020 Nicotiana tabacum HOM05D001236 ORTHO05D001090 3.9e-111 405.6 320 66.9
Os11g0425300 Oryza sativa ssp. japonica HOM05D006407 ORTHO05D008079 3.8e-106 389.0 290 68.3
SGA_v2.0_scaffold29G12072 Striga asiatica HOM05D006407 ORTHO05D008079 6.5e-106 388.3 409 56.0
Atru.chr6.3545 Acer truncatum HOM05D006407 ORTHO05D008079 2.5e-105 386.3 300 69.3
Sabra02G0191100 Salix brachista HOM05D006407 ORTHO05D008079 3.2e-105 386.0 316 64.6
SEGI_39839 Sequoiadendron giganteum HOM05D006407 ORTHO05D008079 2.5e-102 376.3 327 60.9
VMungo1383G2551 Vigna mungo HOM05D006407 ORTHO05D008079 2.9e-98 362.8 341 58.7
CDE09G0438 Ceratophyllum demersum HOM05D006407 ORTHO05D008079 2.0e-91 340.1 239 71.5
Mapoly0125s0038 Marchantia polymorpha HOM05D006407 ORTHO05D008079 1.2e-80 304.3 331 48.3
SMO367G1011 Selaginella moellendorffii HOM05D006407 ORTHO05D008079 5.3e-76 288.9 315 47.6
Pp3c19_21450 Physcomitrium patens HOM05D006407 ORTHO05D008079 1.2e-75 287.7 314 48.7
HPP92_024262 Vanilla planifolia HOM05D006407 ORTHO05D008079 1.9e-73 280.4 202 70.8
unitig_62.g23866 Utricularia gibba HOM05D006407 ORTHO05D008079 6.1e-72 275.4 287 54.7
Nn1g08257 Nelumbo nucifera HOM05D006407 ORTHO05D008079 8.8e-71 271.6 185 74.1
AagrBONN_evm.TU.Sc2ySwM_368.2294 Anthoceros agrestis HOM05D006407 ORTHO05D008079 2.7e-67 260.0 264 51.5
BolC7t44437H Brassica oleracea HOM05D006407 ORTHO05D008079 7.7e-67 258.5 295 53.6
Duzib138G1048 Durio zibethinus HOM05D006407 ORTHO05D008079 1.2e-64 251.1 245 57.6
C07p39170 Brassica napus HOM05D006407 ORTHO05D008079 8.0e-64 248.4 282 52.5
MBI11_g07407_MAGBIO Magnolia biondii HOM05D006407 ORTHO05D003073 6.3e-61 238.8 902 26.7
BcaC06g30794 Brassica carinata HOM05D006407 ORTHO05D008079 4.3e-57 226.1 269 49.1
Nn1g08232 Nelumbo nucifera HOM05D006407 ORTHO05D008079 5.6e-57 225.7 160 72.5
AUR62028699 Chenopodium quinoa HOM05D006407 ORTHO05D008079 1.4e-47 194.5 144 69.4
DCAR_004768 Daucus carota HOM05D006407 ORTHO05D008079 4.3e-41 172.9 158 62.0
BraA06t26831Z Brassica rapa HOM05D006407 ORTHO05D008079 1.1e-36 158.3 131 63.4
Migut.D00733 Erythranthe guttata HOM05D006407 ORTHO05D008079 3.9e-34 149.8 114 67.5
CBR_g12604 Chara braunii HOM05D001724 ORTHO05D007284 1.6e-32 144.4 334 31.7
A06p39160 Brassica napus HOM05D006407 ORTHO05D008079 9.3e-28 128.6 177 44.6
CDE02G0544 Ceratophyllum demersum HOM05D006407 ORTHO05D008079 5.8e-22 109.4 82 64.6
MCO11G451 Micromonas commoda HOM05D006407 ORTHO05D008079 3.1e-15 87.0 261 29.1
Cre09.g393800 Chlamydomonas reinhardtii HOM05D006407 ORTHO05D008079 9.0e-15 85.5 327 28.7
Oeu032606.1 Olea europaea HOM05D006407 ORTHO05D008079 3.8e-13 80.1 48 79.2
Lsat_1_v5_gn_9_60420 Lactuca sativa HOM05D001780 ORTHO05D008079 1.6e-11 74.7 46 69.6
MD05G1159200 Malus domestica HOM05D006407 ORTHO05D008079 1.3e-10 71.6 49 69.4
arahy.Tifrunner.gnm1.ann1.91BFZF Arachis hypogaea HOM05D006407 ORTHO05D008079 1.8e-10 71.2 82 48.8
arahy.Tifrunner.gnm1.ann1.6HQ4SR Arachis hypogaea HOM05D006407 ORTHO05D008079 4.5e-06 56.6 75 45.3


User provided reference genes

Program Settings