Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0686G164 Amborella trichopoda HOM05D005666 ORTHO05D007183 0.0e+00 1192.2 599 100.0
TAR371G0349 Trochodendron aralioides HOM05D005666 ORTHO05D007183 4.9e-199 698.4 623 59.1
MBI16_g31718_MAGBIO Magnolia biondii HOM05D005666 ORTHO05D007183 9.3e-198 694.1 622 58.5
Aqoxy3G01199 Aquilegia oxysepala HOM05D005666 ORTHO05D007183 1.6e-194 683.3 617 57.2
PSO478G0823 Papaver somniferum HOM05D005666 ORTHO05D007183 4.2e-190 668.7 606 56.9
PSO017G6377 Papaver somniferum HOM05D005666 ORTHO05D007183 5.5e-190 668.3 606 57.1
Nn3g16730 Nelumbo nucifera HOM05D005666 ORTHO05D007183 5.7e-187 658.3 599 58.3
Atru.chr6.2394 Acer truncatum HOM05D005666 ORTHO05D007183 2.7e-181 639.4 615 54.5
QL02p074714 Quercus lobata HOM05D005666 ORTHO05D007183 2.7e-181 639.4 613 54.0
Prupe.3G291700 Prunus persica HOM05D005666 ORTHO05D007183 3.6e-181 639.0 615 53.5
GSVIVG01032407001 Vitis vinifera HOM05D005666 ORTHO05D007183 3.6e-181 639.0 612 56.0
Duzib147G1248 Durio zibethinus HOM05D005666 ORTHO05D007183 1.8e-180 636.7 612 54.2
MD17G1027000 Malus domestica HOM05D005666 ORTHO05D007183 3.9e-180 635.6 619 53.6
Ciclev10014455m.g Citrus clementina HOM05D005666 ORTHO05D007183 1.8e-177 626.7 606 55.1
MD09G1027000 Malus domestica HOM05D005666 ORTHO05D007183 2.4e-177 626.3 616 52.4
Hma1.2p1_0999F.1_g246210 Hydrangea macrophylla HOM05D005666 ORTHO05D007183 5.3e-177 625.2 612 54.1
Gohir.D04G057600 Gossypium hirsutum HOM05D005666 ORTHO05D007183 6.9e-177 624.8 612 53.3
CDE05G2460 Ceratophyllum demersum HOM05D005666 ORTHO05D007183 2.0e-176 623.2 605 53.7
Gorai.012G064300 Gossypium raimondii HOM05D005666 ORTHO05D007183 3.4e-176 622.5 612 53.3
Lalb_Chr12g0199101 Lupinus albus HOM05D005666 ORTHO05D007183 2.9e-175 619.4 614 52.0
Actinidia35772 Actinidia chinensis HOM05D005666 ORTHO05D007183 6.5e-175 618.2 614 53.7
CSS0006540 Camellia sinensis var. sinensis HOM05D005666 ORTHO05D007183 8.5e-175 617.8 614 53.6
Ah.05g168070 Amaranthus hybridus HOM05D005666 ORTHO05D007183 1.4e-174 617.1 615 53.2
CANSAT64G2468 Cannabis sativa HOM05D005666 ORTHO05D007183 1.9e-174 616.7 618 52.4
Migut.K01395 Erythranthe guttata HOM05D005666 ORTHO05D007183 7.2e-174 614.8 601 54.4
Lju41A42G100 Lonicera japonica HOM05D005666 ORTHO05D007183 3.6e-173 612.5 612 52.5
Hund22837 Selenicereus undatus HOM05D005666 ORTHO05D007183 4.7e-173 612.1 613 53.7
COL.COLO4_29116 Corchorus olitorius HOM05D005666 ORTHO05D007183 1.0e-172 610.9 602 53.8
Glyma.05G003600 Glycine max HOM05D005666 ORTHO05D007183 1.4e-172 610.5 616 51.9
Sabra16G0224200 Salix brachista HOM05D005666 ORTHO05D007183 3.9e-172 609.0 615 51.9
Cpa.g.sc130.81 Carica papaya HOM05D005666 ORTHO05D007183 1.1e-171 607.4 617 52.4
Potri.001G345200 Populus trichocarpa HOM05D005666 ORTHO05D007183 1.1e-171 607.4 616 51.3
PGR083G1531 Punica granatum HOM05D005666 ORTHO05D007183 1.1e-171 607.4 612 52.5
TPR.G14074 Trifolium pratense HOM05D005666 ORTHO05D007183 2.0e-171 606.7 616 51.9
Lalb_Chr13g0300491 Lupinus albus HOM05D005666 ORTHO05D007183 3.3e-171 605.9 615 51.7
Hma1.2p1_0999F.1_g246220 Hydrangea macrophylla HOM05D005666 ORTHO05D007183 4.4e-171 605.5 593 53.8
Rhsim10G0213300 Rhododendron simsii HOM05D005666 ORTHO05D007183 4.4e-171 605.5 615 52.0
AUR62026681 Chenopodium quinoa HOM05D005666 ORTHO05D007183 1.7e-170 603.6 613 52.5
TWI56G0621 Tripterygium wilfordii HOM05D005666 ORTHO05D007183 2.2e-170 603.2 614 51.5
SGA_v2.0_scaffold47G17503 Striga asiatica HOM05D005666 ORTHO05D007183 2.8e-170 602.8 612 52.9
vmacro18287 Vaccinium macrocarpon HOM05D005666 ORTHO05D007183 2.8e-170 602.8 609 52.2
FAN14G3607 Fragaria x ananassa HOM05D005666 ORTHO05D007183 3.7e-170 602.4 640 49.8
FAN05G0542 Fragaria x ananassa HOM05D005666 ORTHO05D007183 4.8e-170 602.1 640 50.3
HanXRQChr15g0475291 Helianthus annuus HOM05D005666 ORTHO05D007183 4.8e-170 602.1 605 53.9
VMungo0464G0315 Vigna mungo HOM05D005666 ORTHO05D007183 8.2e-170 601.3 617 50.9
Lj2g0025454 Lotus japonicus HOM05D005666 ORTHO05D007183 1.1e-169 600.9 605 53.1
Phvul.004G006900 Phaseolus vulgaris HOM05D005666 ORTHO05D007183 1.1e-169 600.9 616 51.3
Manes.17G112200 Manihot esculenta HOM05D005666 ORTHO05D007183 1.4e-169 600.5 611 51.7
Gohir.A05G355700 Gossypium hirsutum HOM05D005666 ORTHO05D007183 3.1e-169 599.4 597 52.8
FvH4_6g51190 Fragaria vesca HOM05D005666 ORTHO05D007183 4.1e-169 599.0 640 49.7
RcHm_v2.0_Chr2g0172791 Rosa chinensis HOM05D005666 ORTHO05D007183 5.3e-169 598.6 640 50.0
Sc03g0007440 Simmondsia chinensis HOM05D005666 ORTHO05D007183 1.2e-168 597.4 609 51.2
Glyma.19G004600 Glycine max HOM05D005666 ORTHO05D007183 2.0e-168 596.7 616 52.4
Zm00001eb156580 Zea mays HOM05D005666 ORTHO05D007183 4.5e-168 595.5 613 51.4
Cc07_g01670 Coffea canephora HOM05D005666 ORTHO05D007183 7.7e-168 594.7 612 51.0
Haze_10618 Corylus avellana HOM05D005666 ORTHO05D007183 7.7e-168 594.7 613 52.9
FAN09G4801 Fragaria x ananassa HOM05D005666 ORTHO05D007183 7.7e-168 594.7 640 49.2
FAN02G4175 Fragaria x ananassa HOM05D005666 ORTHO05D007183 2.9e-167 592.8 649 49.5
MELO3C021580.2 Cucumis melo HOM05D005666 ORTHO05D007183 8.5e-167 591.3 619 50.9
ECA246G2761 Erigeron canadensis HOM05D005666 ORTHO05D007183 1.1e-166 590.9 615 51.7
CsaV3_5G027130 Cucumis sativus L. HOM05D005666 ORTHO05D007183 2.5e-166 589.7 617 51.2
Lsat_1_v5_gn_0_47721 Lactuca sativa HOM05D005666 ORTHO05D007183 1.6e-165 587.0 609 52.5
Thecc.04G017300 Theobroma cacao HOM05D005666 ORTHO05D007183 3.6e-165 585.9 614 51.1
ClCG09G019260 Citrullus lanatus HOM05D005666 ORTHO05D007183 4.7e-165 585.5 618 51.3
Medtr8g094170 Medicago truncatula HOM05D005666 ORTHO05D007183 1.4e-164 583.9 616 50.0
Psat1g054440 Pisum sativum HOM05D005666 ORTHO05D007183 3.0e-164 582.8 619 50.4
Eucgr.L01920 Eucalyptus grandis HOM05D005666 ORTHO05D007183 3.9e-164 582.4 614 50.5
SalBow7G2092 Salvia bowleyana HOM05D005666 ORTHO05D007183 8.8e-164 581.3 609 50.6
CiPaw.03G043800 Carya illinoinensis HOM05D005666 ORTHO05D007183 3.3e-163 579.3 615 50.7
Sopen02g016930 Solanum pennellii HOM05D005666 ORTHO05D007183 3.3e-163 579.3 605 50.2
Oeu048621.1 Olea europaea HOM05D005666 ORTHO05D007183 1.3e-162 577.4 596 51.5
Ca_04159_v3 Cicer arietinum L. HOM05D005666 ORTHO05D007183 1.7e-162 577.0 615 50.7
Sed0018750 Sechium edule HOM05D005666 ORTHO05D007183 2.2e-162 576.6 615 49.6
ATR0762G005 Amborella trichopoda HOM05D005666 ORTHO05D007183 2.8e-162 576.2 317 91.2
Rhsim08G0049000 Rhododendron simsii HOM05D005666 ORTHO05D007183 6.3e-162 575.1 596 51.8
arahy.Tifrunner.gnm1.ann1.XQUA9L Arachis hypogaea HOM05D005666 ORTHO05D007183 8.2e-162 574.7 600 50.8
Nitab4.5_0008365g0020 Nicotiana tabacum HOM05D005666 ORTHO05D007183 1.1e-161 574.3 612 50.2
PGSC0003DMG400006959 Solanum tuberosum HOM05D005666 ORTHO05D007183 1.4e-161 573.9 605 49.4
CAN.G1057.3 Capsicum annuum HOM05D005666 ORTHO05D007183 2.0e-160 570.1 605 48.6
HanXRQChr17g0548481 Helianthus annuus HOM05D005666 ORTHO05D007183 3.5e-160 569.3 601 51.1
EL10Ac1g01578 Beta vulgaris HOM05D005666 ORTHO05D007183 8.8e-156 554.7 627 49.8
Thhalv10012831m.g Eutrema salsugineum HOM05D005666 ORTHO05D007183 1.5e-155 553.9 608 50.0
Aa31LG11G15280 Aethionema arabicum HOM05D005666 ORTHO05D007183 4.4e-155 552.4 609 51.1
BcaB08g36600 Brassica carinata HOM05D005666 ORTHO05D007183 9.8e-155 551.2 606 50.8
arahy.Tifrunner.gnm1.ann1.D3X7TW Arachis hypogaea HOM05D005666 ORTHO05D007183 2.8e-154 549.7 582 50.3
A10p20490 Brassica napus HOM05D005666 ORTHO05D007183 2.8e-154 549.7 612 50.3
DCAR_027499 Daucus carota HOM05D005666 ORTHO05D007183 1.1e-153 547.7 584 50.9
Sp6g25230 Schrenkiella parvula HOM05D005666 ORTHO05D007183 1.1e-153 547.7 608 49.3
BraA10t44118Z Brassica rapa HOM05D005666 ORTHO05D007183 2.4e-153 546.6 606 50.0
AL6G30550 Arabidopsis lyrata HOM05D005666 ORTHO05D007183 3.1e-153 546.2 609 49.1
AT5G19130 Arabidopsis thaliana HOM05D005666 ORTHO05D007183 3.1e-153 546.2 608 49.7
BolC9t58577H Brassica oleracea HOM05D005666 ORTHO05D007183 4.1e-153 545.8 612 49.7
C09p57110 Brassica napus HOM05D005666 ORTHO05D007183 9.1e-153 544.7 606 50.5
Carub.0006s1746 Capsella rubella HOM05D005666 ORTHO05D007183 9.1e-153 544.7 608 49.3
BcaC04g18594 Brassica carinata HOM05D005666 ORTHO05D007183 1.2e-152 544.3 606 50.5
Nitab4.5_0002529g0030 Nicotiana tabacum HOM05D005666 ORTHO05D007183 1.0e-151 541.2 594 49.0
HPP92_013793 Vanilla planifolia HOM05D005666 ORTHO05D007183 5.0e-151 538.9 601 50.4
CSS0011984 Camellia sinensis var. sinensis HOM05D005666 ORTHO05D007183 2.7e-149 533.1 599 51.1
unitig_747.g21863 Utricularia gibba HOM05D005666 ORTHO05D007183 2.7e-149 533.1 569 50.3
Solyc02g067820.4 Solanum lycopersicum HOM05D005666 ORTHO05D007183 9.8e-147 524.6 593 47.7
DCAR_011253 Daucus carota HOM05D005666 ORTHO05D007183 2.1e-141 506.9 656 45.6
Dinv33442 Davidia involucrata HOM05D005666 ORTHO05D007183 2.8e-141 506.5 575 48.3
Peaxi162Scf00080g00117 Petunia axillaris HOM05D005666 ORTHO05D007183 2.0e-139 500.4 597 46.6
THA.LOC104824726 Tarenaya hassleriana HOM05D005666 ORTHO05D007183 1.4e-137 494.2 601 46.9
FAN05G2905 Fragaria x ananassa HOM05D005666 ORTHO05D007183 9.8e-131 471.5 539 49.0
ATR0919G001 Amborella trichopoda HOM05D005666 ORTHO05D007183 9.8e-123 444.9 240 93.8
CARHR193820 Cardamine hirsuta HOM05D005666 ORTHO05D007183 2.9e-122 443.4 501 48.9
vmacro06910 Vaccinium macrocarpon HOM05D005666 ORTHO05D007183 2.3e-116 423.7 516 48.1
Eucgr.J02243 Eucalyptus grandis HOM05D005666 ORTHO05D007183 1.2e-115 421.4 421 52.7
Mapoly0008s0195 Marchantia polymorpha HOM05D005666 ORTHO05D007183 3.9e-103 379.8 649 37.9
BcaB05g23370 Brassica carinata HOM05D005666 ORTHO05D007183 1.4e-97 361.3 606 40.9
AagrBONN_evm.TU.Sc2ySwM_344.4982 Anthoceros agrestis HOM05D005666 ORTHO05D007183 3.0e-95 353.6 680 35.6
CSS0008870 Camellia sinensis var. sinensis HOM05D005666 ORTHO05D007183 4.3e-94 349.7 320 56.2
SEGI_39396 Sequoiadendron giganteum HOM05D005666 ORTHO05D007183 1.2e-91 341.7 332 52.7
SMO134G0274 Selaginella moellendorffii HOM05D005666 ORTHO05D007183 8.4e-90 335.5 611 37.0
AUR62040590 Chenopodium quinoa HOM05D005666 ORTHO05D007183 1.9e-86 324.3 326 52.1
Actinidia16943 Actinidia chinensis HOM05D005666 ORTHO05D007183 6.2e-85 319.3 531 39.9
Pp3c22_6140 Physcomitrium patens HOM05D005666 ORTHO05D007183 3.3e-78 297.0 389 44.5
THA.LOC109116951 Tarenaya hassleriana HOM05D005666 ORTHO05D007183 2.3e-63 247.7 303 48.2
SHI16418 Sapria himalayana HOM05D005666 ORTHO05D007183 5.0e-58 229.9 290 48.3
Os01g0682200 Oryza sativa ssp. japonica HOM05D005666 ORTHO05D007183 4.0e-47 193.7 253 43.9
CBR_g49194 Chara braunii HOM05D005666 ORTHO05D007183 5.5e-41 173.3 268 38.1
SHI16416 Sapria himalayana HOM05D005666 ORTHO05D007183 5.5e-41 173.3 263 40.7
TPR.G20372 Trifolium pratense HOM05D005666 ORTHO05D007183 1.1e-28 132.5 159 44.0
MCO10G117 Micromonas commoda HOM05D005666 ORTHO05D007183 1.9e-25 121.7 509 25.3
Oeu030978.1 Olea europaea HOM05D005666 ORTHO05D007183 8.3e-21 106.3 118 44.1
A02p05250 Brassica napus HOM05D005666 ORTHO05D007183 6.8e-15 86.7 303 27.1
CiPaw.04G028500 Carya illinoinensis HOM05D005666 ORTHO05D007183 6.0e-11 73.6 63 61.9
Thecc.05G064500 Theobroma cacao HOM05D005666 ORTHO05D007183 3.6e-08 64.3 87 37.9
BolC2t06938H Brassica oleracea HOM05D005666 ORTHO05D043081 1.5e-06 58.9 64 54.7


User provided reference genes

Program Settings