Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0686G035 Amborella trichopoda HOM05D004226 ORTHO05D004842 1.6e-100 369.4 183 100.0
TAR362G0792 Trochodendron aralioides HOM05D004226 ORTHO05D004842 1.9e-40 169.9 163 54.0
TAR365G1191 Trochodendron aralioides HOM05D004226 ORTHO05D004842 2.4e-40 169.5 161 56.5
SEGI_00481 Sequoiadendron giganteum HOM05D004226 ORTHO05D004842 1.6e-39 166.8 155 55.5
TAR633G1997 Trochodendron aralioides HOM05D004226 ORTHO05D004842 2.1e-39 166.4 165 51.5
Aqoxy2G03959 Aquilegia oxysepala HOM05D004226 ORTHO05D004842 1.7e-38 163.3 163 52.8
Hund02794 Selenicereus undatus HOM05D004226 ORTHO05D004842 1.7e-38 163.3 150 57.3
Dinv28812 Davidia involucrata HOM05D004226 ORTHO05D004842 4.3e-37 158.7 169 52.1
Dinv10439 Davidia involucrata HOM05D004226 ORTHO05D004842 1.3e-36 157.1 158 53.8
Mapoly0001s0501 Marchantia polymorpha HOM05D004226 ORTHO05D004842 1.6e-36 156.8 192 45.8
Nn1g08255 Nelumbo nucifera HOM05D004226 ORTHO05D004842 6.2e-36 154.8 185 45.9
Actinidia23795 Actinidia chinensis HOM05D004226 ORTHO05D004842 8.1e-36 154.5 168 50.6
Actinidia30018 Actinidia chinensis HOM05D004226 ORTHO05D004842 1.4e-35 153.7 162 52.5
VMungo1383G2422 Vigna mungo HOM05D004226 ORTHO05D004842 5.8e-34 148.3 151 51.0
vmacro02815 Vaccinium macrocarpon HOM05D004226 ORTHO05D004842 7.6e-34 147.9 158 51.9
AUR62008122 Chenopodium quinoa HOM05D004226 ORTHO05D004842 9.9e-34 147.5 153 52.3
SMO146G0354 Selaginella moellendorffii HOM05D004226 ORTHO05D004842 1.3e-33 147.1 130 56.2
AUR62028700 Chenopodium quinoa HOM05D004226 ORTHO05D004842 1.7e-33 146.7 153 52.3
Phvul.008G136900 Phaseolus vulgaris HOM05D004226 ORTHO05D004842 1.7e-33 146.7 151 51.0
Lsat_1_v5_gn_8_98041 Lactuca sativa HOM05D004226 ORTHO05D004842 2.9e-33 146.0 169 49.1
Rhsim13G0052600 Rhododendron simsii HOM05D004226 ORTHO05D004842 3.8e-33 145.6 149 51.7
Lj2A1117T18 Lonicera japonica HOM05D004226 ORTHO05D004842 4.9e-33 145.2 153 49.7
Ah.11g051030 Amaranthus hybridus HOM05D004226 ORTHO05D004842 6.4e-33 144.8 151 53.0
Glyma.18G152900 Glycine max HOM05D004226 ORTHO05D004842 6.4e-33 144.8 151 50.3
Lalb_Chr01g0021991 Lupinus albus HOM05D004226 ORTHO05D004842 6.4e-33 144.8 150 51.3
Lalb_Chr03g0041091 Lupinus albus HOM05D004226 ORTHO05D004842 6.4e-33 144.8 148 52.7
Eucgr.H00726 Eucalyptus grandis HOM05D004226 ORTHO05D004842 1.4e-32 143.7 155 49.7
Duzib138G1045 Durio zibethinus HOM05D004226 ORTHO05D004842 1.9e-32 143.3 170 50.0
HPP92_024259 Vanilla planifolia HOM05D004226 ORTHO05D004842 1.9e-32 143.3 159 49.1
ECA236G1737 Erigeron canadensis HOM05D004226 ORTHO05D004842 3.2e-32 142.5 163 48.5
CiPaw.13G055300 Carya illinoinensis HOM05D004226 ORTHO05D004842 4.2e-32 142.1 170 48.8
Sc17g0001670 Simmondsia chinensis HOM05D004226 ORTHO05D004842 4.2e-32 142.1 144 50.7
EL10Ac5g10626 Beta vulgaris HOM05D004226 ORTHO05D004842 5.4e-32 141.7 155 50.3
Haze_03501 Corylus avellana HOM05D004226 ORTHO05D004842 7.1e-32 141.4 161 51.6
Hund09468 Selenicereus undatus HOM05D004226 ORTHO05D004842 7.1e-32 141.4 163 48.5
Nitab4.5_0009151g0020 Nicotiana tabacum HOM05D004226 ORTHO05D004842 9.3e-32 141.0 166 50.0
PGR083G1064 Punica granatum HOM05D004226 ORTHO05D004842 9.3e-32 141.0 160 46.9
Nitab4.5_0000038g0150 Nicotiana tabacum HOM05D004226 ORTHO05D004842 1.2e-31 140.6 166 50.0
Cfa010569 Carpinus fangiana HOM05D004226 ORTHO05D004842 1.6e-31 140.2 161 51.6
Migut.N00664 Erythranthe guttata HOM05D004226 ORTHO05D004842 1.6e-31 140.2 156 48.1
Actinidia34543 Actinidia chinensis HOM05D004226 ORTHO05D004842 2.1e-31 139.8 161 48.4
HanXRQChr16g0507911 Helianthus annuus HOM05D004226 ORTHO05D004842 2.1e-31 139.8 161 49.7
QL09p046251 Quercus lobata HOM05D004226 ORTHO05D004842 2.1e-31 139.8 178 47.2
HanXRQChr09g0257641 Helianthus annuus HOM05D004226 ORTHO05D004842 3.5e-31 139.0 160 50.0
Hma1.2p1_0781F.1_g216920 Hydrangea macrophylla HOM05D004226 ORTHO05D004842 7.9e-31 137.9 175 48.0
Oeu003656.1 Olea europaea HOM05D004226 ORTHO05D004842 7.9e-31 137.9 157 51.6
ClCG05G015470 Citrullus lanatus HOM05D004226 ORTHO05D004842 1.3e-30 137.1 160 46.9
MSTRG.18494 Avicennia marina HOM05D004226 ORTHO05D004842 2.3e-30 136.3 151 52.3
Duzib133G0243 Durio zibethinus HOM05D004226 ORTHO05D004842 2.3e-30 136.3 161 50.3
Gohir.A11G142500 Gossypium hirsutum HOM05D004226 ORTHO05D004842 2.3e-30 136.3 159 49.7
Gorai.007G159600 Gossypium raimondii HOM05D004226 ORTHO05D004842 2.3e-30 136.3 159 49.7
Gohir.D11G148800 Gossypium hirsutum HOM05D004226 ORTHO05D004842 3.0e-30 136.0 159 49.7
Glyma.08G344200 Glycine max HOM05D004226 ORTHO05D004842 3.9e-30 135.6 152 47.4
Psat3g151000 Pisum sativum HOM05D004226 ORTHO05D004842 5.1e-30 135.2 149 49.7
Cpa.g.sc8.73 Carica papaya HOM05D004226 ORTHO05D004842 3.3e-29 132.5 170 43.5
ECA247G2547 Erigeron canadensis HOM05D004226 ORTHO05D004842 3.3e-29 132.5 157 45.9
HanXRQChr08g0231431 Helianthus annuus HOM05D004226 ORTHO05D004842 3.3e-29 132.5 159 49.1
Oeu057834.2 Olea europaea HOM05D000039 ORTHO05D005440 3.3e-29 132.5 148 50.7
Lj1g0015941 Lotus japonicus HOM05D004226 ORTHO05D004842 4.3e-29 132.1 163 46.6
Cc01_g16140 Coffea canephora HOM05D004226 ORTHO05D004842 2.8e-28 129.4 158 48.7
MELO3C003732.2 Cucumis melo HOM05D004226 ORTHO05D004842 6.2e-28 128.3 151 45.7
Medtr7g052690 Medicago truncatula HOM05D004226 ORTHO05D004842 6.2e-28 128.3 157 46.5
THA.LOC104802646 Tarenaya hassleriana HOM05D004226 ORTHO05D004842 8.1e-28 127.9 165 45.5
Thecc.01G211100 Theobroma cacao HOM05D004226 ORTHO05D004842 8.1e-28 127.9 161 49.1
Manes.12G054100 Manihot esculenta HOM05D004226 ORTHO05D004842 1.1e-27 127.5 161 47.2
DCAR_018624 Daucus carota HOM05D004226 ORTHO05D004842 1.8e-27 126.7 159 45.9
THA.LOC104822467 Tarenaya hassleriana HOM05D004226 ORTHO05D004842 2.4e-27 126.3 160 46.2
Ciclev10016998m.g Citrus clementina HOM05D004226 ORTHO05D004842 3.1e-27 125.9 172 44.2
TPR.G26804 Trifolium pratense HOM05D004226 ORTHO05D004842 3.1e-27 125.9 160 46.2
vmacro14692 Vaccinium macrocarpon HOM05D004226 ORTHO05D004842 3.1e-27 125.9 161 42.9
CsaV3_3G046080 Cucumis sativus L. HOM05D004226 ORTHO05D004842 4.0e-27 125.6 146 43.8
Prupe.8G190400 Prunus persica HOM05D004226 ORTHO05D004842 4.0e-27 125.6 162 46.9
SGA_v2.0_scaffold8G04494 Striga asiatica HOM05D004226 ORTHO05D004842 5.3e-27 125.2 160 46.9
DCAR_012646 Daucus carota HOM05D004226 ORTHO05D004842 9.0e-27 124.4 172 47.1
Potri.002G251200 Populus trichocarpa HOM05D004226 ORTHO05D004842 9.0e-27 124.4 158 46.2
DCAR_004767 Daucus carota HOM05D004226 ORTHO05D004842 2.6e-26 122.9 146 47.3
TWI18G1341 Tripterygium wilfordii HOM05D004226 ORTHO05D004842 3.4e-26 122.5 171 47.4
MSTRG.21303 Avicennia marina HOM05D004226 ORTHO05D004842 4.5e-26 122.1 153 45.1
CSS0019192 Camellia sinensis var. sinensis HOM05D004226 ORTHO05D004842 4.5e-26 122.1 129 51.2
A06p39150 Brassica napus HOM05D004226 ORTHO05D004842 7.6e-26 121.3 157 48.4
SGA_v2.0_scaffold624G53238 Striga asiatica HOM05D004226 ORTHO05D004842 7.6e-26 121.3 151 45.0
Rhsim01G0248500 Rhododendron simsii HOM05D004226 ORTHO05D004842 9.9e-26 120.9 149 46.3
CDE05G1161 Ceratophyllum demersum HOM05D004226 ORTHO05D004842 1.3e-25 120.6 169 44.4
Migut.D00735 Erythranthe guttata HOM05D004226 ORTHO05D004842 1.3e-25 120.6 159 44.0
COL.COLO4_26572 Corchorus olitorius HOM05D004226 ORTHO05D004842 1.7e-25 120.2 160 46.2
TWI36G1598 Tripterygium wilfordii HOM05D004226 ORTHO05D004842 1.7e-25 120.2 170 42.9
BraA06t26830Z Brassica rapa HOM05D004226 ORTHO05D004842 2.9e-25 119.4 157 47.8
Thhalv10005050m.g Eutrema salsugineum HOM05D004226 ORTHO05D004842 6.4e-25 118.2 156 46.8
BolC7t44438H Brassica oleracea HOM05D004226 ORTHO05D004842 8.4e-25 117.9 157 47.1
Lj3g0009756 Lotus japonicus HOM05D004226 ORTHO05D004842 8.4e-25 117.9 146 46.6
BcaC06g30793 Brassica carinata HOM05D004226 ORTHO05D004842 1.1e-24 117.5 157 46.5
Sabra02G0191000 Salix brachista HOM05D004226 ORTHO05D004842 1.4e-24 117.1 175 42.3
Migut.D00732 Erythranthe guttata HOM05D004226 ORTHO05D004842 2.4e-24 116.3 160 43.8
Peaxi162Scf00372g00004 Petunia axillaris HOM05D004226 ORTHO05D004842 3.2e-24 115.9 161 44.1
Sp2g18850 Schrenkiella parvula HOM05D004226 ORTHO05D004842 1.2e-23 114.0 150 48.7
Sopen06g002500 Solanum pennellii HOM05D004226 ORTHO05D004842 1.2e-23 114.0 149 46.3
PGSC0003DMG400027348 Solanum tuberosum HOM05D004226 ORTHO05D004842 1.2e-23 114.0 149 43.6
CANSAT01G0104 Cannabis sativa HOM05D004226 ORTHO05D004842 1.6e-23 113.6 176 43.2
Sed0006210 Sechium edule HOM05D004226 ORTHO05D004842 2.1e-23 113.2 164 42.7
SGA_v2.0_scaffold29G12070 Striga asiatica HOM05D004226 ORTHO05D004842 2.7e-23 112.8 179 40.8
C07p39180 Brassica napus HOM05D004226 ORTHO05D004842 3.5e-23 112.5 159 46.5
PSO017G4362 Papaver somniferum HOM05D004226 ORTHO05D004842 3.5e-23 112.5 140 42.1
PSO675G4654 Papaver somniferum HOM05D004226 ORTHO05D004842 4.6e-23 112.1 140 42.1
Solyc06g007610.2 Solanum lycopersicum HOM05D004226 ORTHO05D004842 7.9e-23 111.3 148 45.9
Aa31sc186G10 Aethionema arabicum HOM05D004226 ORTHO05D004842 1.0e-22 110.9 139 43.2
BolC2t11714H Brassica oleracea HOM05D004226 ORTHO05D004842 1.0e-22 110.9 140 49.3
BcaC03g17654 Brassica carinata HOM05D004226 ORTHO05D004842 1.3e-22 110.5 140 49.3
Carub.0008s0806 Capsella rubella HOM05D004226 ORTHO05D004842 1.3e-22 110.5 165 42.4
PGSC0003DMG400020653 Solanum tuberosum HOM05D004226 ORTHO05D004842 1.3e-22 110.5 149 45.0
C02p56560 Brassica napus HOM05D004226 ORTHO05D004842 1.8e-22 110.2 140 49.3
Nitab4.5_0002167g0150 Nicotiana tabacum HOM05D004226 ORTHO05D004842 2.3e-22 109.8 158 43.7
C09p04850 Brassica napus HOM05D004226 ORTHO05D004842 3.0e-22 109.4 160 43.8
Nitab4.5_0002311g0050 Nicotiana tabacum HOM05D004226 ORTHO05D004842 3.0e-22 109.4 157 42.7
A02p37490 Brassica napus HOM05D004226 ORTHO05D004842 3.9e-22 109.0 140 49.3
BcaC04g23773 Brassica carinata HOM05D004226 ORTHO05D004842 6.7e-22 108.2 157 45.9
BolC9t53412H Brassica oleracea HOM05D004226 ORTHO05D004842 6.7e-22 108.2 157 45.9
Sopen11g003480 Solanum pennellii HOM05D004226 ORTHO05D004842 8.7e-22 107.8 149 41.6
CDE05G0628 Ceratophyllum demersum HOM05D004226 ORTHO05D004842 1.1e-21 107.5 127 47.2
BraA02t08736Z Brassica rapa HOM05D004226 ORTHO05D004842 2.5e-21 106.3 140 48.6
A09p04540 Brassica napus HOM05D004226 ORTHO05D004842 4.3e-21 105.5 157 45.2
BraA09t36089Z Brassica rapa HOM05D004226 ORTHO05D004842 4.3e-21 105.5 157 45.2
THA.LOC104818997 Tarenaya hassleriana HOM05D004226 ORTHO05D004842 4.3e-21 105.5 142 45.1
Gohir.D07G094900 Gossypium hirsutum HOM05D004226 ORTHO05D004842 7.4e-21 104.8 149 43.6
SHI10249 Sapria himalayana HOM05D004226 ORTHO05D004842 9.6e-21 104.4 139 41.7
Gorai.001G102200 Gossypium raimondii HOM05D004226 ORTHO05D004842 1.3e-20 104.0 149 43.0
Pp3c13_5750 Physcomitrium patens HOM05D004226 ORTHO05D004842 1.6e-20 103.6 137 38.7
CAN.G181.39 Capsicum annuum HOM05D004226 ORTHO05D004842 3.7e-20 102.4 142 41.5
Lj3g0001126 Lotus japonicus HOM05D004226 ORTHO05D004842 4.8e-20 102.1 145 43.4
Gohir.A07G090200 Gossypium hirsutum HOM05D004226 ORTHO05D004842 6.2e-20 101.7 149 42.3
Duzib168G0485 Durio zibethinus HOM05D004226 ORTHO05D004842 9.0e-19 97.8 130 43.8
BcaB07g30025 Brassica carinata HOM05D004226 ORTHO05D004842 7.6e-18 94.7 141 44.0
AT5G48480 Arabidopsis thaliana HOM05D004226 ORTHO05D004842 2.9e-17 92.8 152 41.4
AL8G21330 Arabidopsis lyrata HOM05D004226 ORTHO05D004842 4.9e-17 92.0 152 42.1
MD10G1152100 Malus domestica HOM05D004226 ORTHO05D004842 3.2e-16 89.4 148 38.5
CARHR183600 Cardamine hirsuta HOM05D004226 ORTHO05D004842 2.1e-15 86.7 150 40.0
Duzib205G0826 Durio zibethinus HOM05D004226 ORTHO05D004842 2.7e-15 86.3 164 37.8
MD05G1159600 Malus domestica HOM05D004226 ORTHO05D004842 2.7e-15 86.3 150 36.7
Ca_07469_v3 Cicer arietinum L. HOM05D004226 ORTHO05D004842 7.9e-15 84.7 83 53.0
Ca_30573_v3 Cicer arietinum L. HOM05D004226 ORTHO05D004842 7.9e-15 84.7 83 53.0
RcHm_v2.0_Chr6g0282841 Rosa chinensis HOM05D004226 ORTHO05D004842 7.9e-15 84.7 169 38.5
FvH4_2g17810 Fragaria vesca HOM05D004226 ORTHO05D004842 1.0e-14 84.3 161 41.6
Duzib170G0075 Durio zibethinus HOM05D004226 ORTHO05D004842 1.8e-14 83.6 147 39.5
FAN24G0678 Fragaria x ananassa HOM05D004226 ORTHO05D004842 2.3e-14 83.2 161 41.0
Duzib138G0271 Durio zibethinus HOM05D004226 ORTHO05D004842 5.1e-14 82.0 147 36.1
FAN27G2858 Fragaria x ananassa HOM05D004226 ORTHO05D004842 6.7e-14 81.6 171 39.8
FAN27G3147 Fragaria x ananassa HOM05D004226 ORTHO05D004842 6.7e-14 81.6 171 39.8
Atru.chr6.3547 Acer truncatum HOM05D004226 ORTHO05D004842 8.7e-14 81.3 121 36.4
FAN15G3314 Fragaria x ananassa HOM05D004226 ORTHO05D004842 8.7e-14 81.3 171 39.2
Duzib211G0475 Durio zibethinus HOM05D004226 ORTHO05D004842 2.5e-13 79.7 130 39.2
Sc19g0005500 Simmondsia chinensis HOM05D004226 ORTHO05D004842 9.7e-13 77.8 84 47.6
BcaB07g30020 Brassica carinata HOM05D004226 ORTHO05D004842 1.8e-11 73.6 103 44.7
Lj2P1154T27 Lonicera japonica HOM05D004226 ORTHO05D004842 6.9e-11 71.6 77 45.5
Cfa011865 Carpinus fangiana HOM05D004226 ORTHO05D004842 1.2e-10 70.9 92 44.6
Nn4g25974 Nelumbo nucifera HOM05D066638 ORTHO05D004842 1.0e-09 67.8 68 47.1
Nn7g37876 Nelumbo nucifera HOM05D001231 ORTHO05D001012 1.7e-09 67.0 67 47.8
Psat0s337g0040 Pisum sativum HOM05D004226 ORTHO05D004842 2.9e-09 66.2 92 41.3
Nn7g37465 Nelumbo nucifera HOM05D004226 ORTHO05D004842 6.5e-09 65.1 68 45.6
unitig_0.g1219 Utricularia gibba HOM05D004226 ORTHO05D004842 1.1e-08 64.3 76 40.8
BcaC06g31007 Brassica carinata HOM05D004226 ORTHO05D004842 1.9e-08 63.5 137 38.0
Glyma.14G148600 Glycine max HOM05D004226 ORTHO05D004842 4.2e-08 62.4 66 50.0
SEGI_14551 Sequoiadendron giganteum HOM05D004226 ORTHO05D004842 2.7e-07 59.7 60 45.0
SEGI_24806 Sequoiadendron giganteum HOM05D004226 ORTHO05D004842 2.7e-07 59.7 60 45.0
SGA_v2.0_scaffold85G26613 Striga asiatica HOM05D005727 ORTHO05D007324 2.7e-07 59.7 88 39.8
SEGI_39221 Sequoiadendron giganteum HOM05D004226 ORTHO05D004842 7.9e-07 58.2 79 41.8


User provided reference genes

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