Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0684G160 Amborella trichopoda HOM05D006118 ORTHO05D007750 3.5e-82 308.1 147 100.0
ATR0598G044 Amborella trichopoda HOM05D006118 ORTHO05D007750 8.2e-55 217.2 197 60.9
TAR624G0180 Trochodendron aralioides HOM05D006118 ORTHO05D007750 1.2e-34 150.2 92 77.2
GSVIVG01035487001 Vitis vinifera HOM05D006118 ORTHO05D007750 2.7e-34 149.1 114 66.7
Hma1.2p1_0641F.1_g194200 Hydrangea macrophylla HOM05D006118 ORTHO05D007750 4.7e-34 148.3 95 76.8
Hma1.2p1_0641F.1_g194210 Hydrangea macrophylla HOM05D006118 ORTHO05D007750 4.7e-34 148.3 95 76.8
Dinv41849 Davidia involucrata HOM05D006118 ORTHO05D007750 6.1e-34 147.9 95 76.8
CSS0045297 Camellia sinensis var. sinensis HOM05D006118 ORTHO05D007750 2.3e-33 146.0 95 74.7
Thecc.04G313700 Theobroma cacao HOM05D006118 ORTHO05D007750 2.3e-33 146.0 92 73.9
Gohir.A02G058900 Gossypium hirsutum HOM05D006118 ORTHO05D007750 3.0e-33 145.6 92 75.0
Gohir.D02G064600 Gossypium hirsutum HOM05D006118 ORTHO05D007750 4.0e-33 145.2 92 73.9
Rhsim13G0216900 Rhododendron simsii HOM05D006118 ORTHO05D007750 4.0e-33 145.2 96 71.9
Gorai.005G073100 Gossypium raimondii HOM05D006118 ORTHO05D007750 5.2e-33 144.8 92 72.8
VMungo0647G1968 Vigna mungo HOM05D006118 ORTHO05D007750 5.2e-33 144.8 114 62.3
CDE06G0461 Ceratophyllum demersum HOM05D006118 ORTHO05D007750 1.2e-32 143.7 92 73.9
Duzib151G0955 Durio zibethinus HOM05D006118 ORTHO05D007750 1.2e-32 143.7 89 75.3
Eucgr.C00739 Eucalyptus grandis HOM05D006118 ORTHO05D007750 1.5e-32 143.3 92 71.7
vmacro04115 Vaccinium macrocarpon HOM05D006118 ORTHO05D007750 1.5e-32 143.3 96 70.8
Ciclev10005468m.g Citrus clementina HOM05D006118 ORTHO05D007750 2.6e-32 142.5 92 71.7
Actinidia01325 Actinidia chinensis HOM05D006118 ORTHO05D007750 3.3e-32 142.1 95 71.6
Migut.E01785 Erythranthe guttata HOM05D006118 ORTHO05D007750 3.3e-32 142.1 95 71.6
Glyma.14G107200 Glycine max HOM05D006118 ORTHO05D007750 3.3e-32 142.1 92 71.7
PSO063G1448 Papaver somniferum HOM05D006118 ORTHO05D007750 3.3e-32 142.1 92 72.8
PSO421G0086 Papaver somniferum HOM05D006118 ORTHO05D007750 3.3e-32 142.1 92 72.8
Lsat_1_v5_gn_8_70541 Lactuca sativa HOM05D006118 ORTHO05D007750 4.4e-32 141.7 98 69.4
Phvul.001G044800 Phaseolus vulgaris HOM05D006118 ORTHO05D007750 5.7e-32 141.4 114 60.5
Aqoxy7G01030 Aquilegia oxysepala HOM05D006118 ORTHO05D007750 7.5e-32 141.0 92 71.7
CiPaw.16G067300 Carya illinoinensis HOM05D006118 ORTHO05D007750 9.7e-32 140.6 92 72.8
Manes.03G212200 Manihot esculenta HOM05D006118 ORTHO05D007750 1.3e-31 140.2 92 70.7
CANSAT25G1353 Cannabis sativa HOM05D006118 ORTHO05D007750 1.7e-31 139.8 92 72.8
Glyma.17G219300 Glycine max HOM05D006118 ORTHO05D007750 1.7e-31 139.8 92 70.7
Lj5g0024511 Lotus japonicus HOM05D006118 ORTHO05D007750 1.7e-31 139.8 114 60.5
Sc06g0000090 Simmondsia chinensis HOM05D006118 ORTHO05D007750 1.7e-31 139.8 92 70.7
SGA_v2.0_scaffold163G37995 Striga asiatica HOM05D006118 ORTHO05D007750 2.2e-31 139.4 103 68.9
TWI53G1421 Tripterygium wilfordii HOM05D006118 ORTHO05D007750 2.2e-31 139.4 105 68.6
Atru.chr4.3167 Acer truncatum HOM05D006118 ORTHO05D007750 2.8e-31 139.0 92 70.7
arahy.Tifrunner.gnm1.ann1.ZI0SGT Arachis hypogaea HOM05D006118 ORTHO05D007750 2.8e-31 139.0 92 69.6
MELO3C016921.2 Cucumis melo HOM05D006118 ORTHO05D007750 2.8e-31 139.0 92 69.6
CsaV3_4G036130 Cucumis sativus L. HOM05D006118 ORTHO05D007750 2.8e-31 139.0 92 69.6
Ca_13095_v3 Cicer arietinum L. HOM05D006118 ORTHO05D007750 3.7e-31 138.7 114 60.5
Cpa.g.sc146.16 Carica papaya HOM05D006118 ORTHO05D007750 4.8e-31 138.3 92 69.6
HanXRQChr09g0261891 Helianthus annuus HOM05D006118 ORTHO05D007750 4.8e-31 138.3 98 67.3
PGR142G4277 Punica granatum HOM05D006118 ORTHO05D007750 4.8e-31 138.3 92 69.6
Solyc08g061260.4 Solanum lycopersicum HOM05D006118 ORTHO05D007750 4.8e-31 138.3 95 72.6
Sopen08g016640 Solanum pennellii HOM05D006118 ORTHO05D007750 4.8e-31 138.3 95 72.6
PGSC0003DMG402012996 Solanum tuberosum HOM05D006118 ORTHO05D007750 4.8e-31 138.3 95 72.6
ECA236G0212 Erigeron canadensis HOM05D006118 ORTHO05D007750 6.3e-31 137.9 98 67.3
Oeu024208.1 Olea europaea HOM05D006118 ORTHO05D007750 1.8e-30 136.3 96 71.9
AagrBONN_evm.TU.Sc2ySwM_228.1339 Anthoceros agrestis HOM05D006118 ORTHO05D007750 2.4e-30 136.0 92 68.5
ClCG05G015850 Citrullus lanatus HOM05D006118 ORTHO05D007750 3.1e-30 135.6 92 68.5
Lalb_Chr24g0393681 Lupinus albus HOM05D006118 ORTHO05D007750 3.1e-30 135.6 92 68.5
Potri.008G206000 Populus trichocarpa HOM05D006118 ORTHO05D007750 4.1e-30 135.2 92 70.7
MSTRG.14088 Avicennia marina HOM05D006118 ORTHO05D007750 5.3e-30 134.8 95 67.4
COL.COLO4_34509 Corchorus olitorius HOM05D006118 ORTHO05D007750 5.3e-30 134.8 108 62.0
FvH4_2g30820 Fragaria vesca HOM05D006118 ORTHO05D007750 9.1e-30 134.0 89 69.7
FAN15G2451 Fragaria x ananassa HOM05D006118 ORTHO05D007750 9.1e-30 134.0 89 69.7
FAN20G1786 Fragaria x ananassa HOM05D006118 ORTHO05D007750 9.1e-30 134.0 89 69.7
FAN24G3410 Fragaria x ananassa HOM05D006118 ORTHO05D007750 9.1e-30 134.0 89 69.7
Prupe.1G402500 Prunus persica HOM05D006118 ORTHO05D007750 9.1e-30 134.0 92 65.2
RcHm_v2.0_Chr6g0312021 Rosa chinensis HOM05D006118 ORTHO05D007750 9.1e-30 134.0 89 67.4
BcaB07g33772 Brassica carinata HOM05D006118 ORTHO05D007750 1.2e-29 133.7 92 67.4
Sabra08G0153100 Salix brachista HOM05D006118 ORTHO05D007750 1.2e-29 133.7 92 69.6
CARHR037890 Cardamine hirsuta HOM05D006118 ORTHO05D007750 1.6e-29 133.3 103 63.1
Oeu036787.2 Olea europaea HOM05D006118 ORTHO05D007750 1.6e-29 133.3 96 69.8
AT1G48270 Arabidopsis thaliana HOM05D006118 ORTHO05D007750 2.0e-29 132.9 92 67.4
BcaC08g43024 Brassica carinata HOM05D006118 ORTHO05D007750 2.0e-29 132.9 92 67.4
A06p04570 Brassica napus HOM05D006118 ORTHO05D007750 2.0e-29 132.9 92 67.4
C06p02770 Brassica napus HOM05D006118 ORTHO05D007750 2.0e-29 132.9 92 67.4
BolC6t35406H Brassica oleracea HOM05D006118 ORTHO05D007750 2.0e-29 132.9 92 67.4
BraA06t23661Z Brassica rapa HOM05D006118 ORTHO05D007750 2.0e-29 132.9 92 67.4
Carub.0001s3740 Capsella rubella HOM05D006118 ORTHO05D007750 2.0e-29 132.9 92 67.4
Haze_18321 Corylus avellana HOM05D006118 ORTHO05D007750 2.0e-29 132.9 114 59.6
Thhalv10011644m.g Eutrema salsugineum HOM05D006118 ORTHO05D007750 2.0e-29 132.9 92 67.4
Sp1g35230 Schrenkiella parvula HOM05D006118 ORTHO05D007750 2.0e-29 132.9 92 67.4
MD15G1048100 Malus domestica HOM05D006118 ORTHO05D007750 2.7e-29 132.5 89 66.3
THA.LOC104824720 Tarenaya hassleriana HOM05D006118 ORTHO05D007750 3.5e-29 132.1 114 57.9
AL1G54870 Arabidopsis lyrata HOM05D006118 ORTHO05D007750 5.9e-29 131.3 92 66.3
MD08G1073200 Malus domestica HOM05D006118 ORTHO05D007750 5.9e-29 131.3 89 66.3
arahy.Tifrunner.gnm1.ann1.Z643MN Arachis hypogaea HOM05D006118 ORTHO05D007750 7.7e-29 131.0 102 62.7
FAN27G1493 Fragaria x ananassa HOM05D006118 ORTHO05D007750 7.7e-29 131.0 89 68.5
Sed0026686 Sechium edule HOM05D006118 ORTHO05D007750 7.7e-29 131.0 93 64.5
Cc08_g01010 Coffea canephora HOM05D006118 ORTHO05D007750 1.0e-28 130.6 97 69.1
Medtr1g015010 Medicago truncatula HOM05D006118 ORTHO05D007750 1.0e-28 130.6 89 69.7
TPR.G38901 Trifolium pratense HOM05D006118 ORTHO05D007750 1.0e-28 130.6 89 69.7
SMO119G0499 Selaginella moellendorffii HOM05D006118 ORTHO05D007750 1.7e-28 129.8 89 66.3
Psat6g023080 Pisum sativum HOM05D006118 ORTHO05D007750 5.0e-28 128.3 115 59.1
Os06g0199800 Oryza sativa ssp. japonica HOM05D006118 ORTHO05D007750 8.5e-28 127.5 92 63.0
Pp3c15_15980 Physcomitrium patens HOM05D006118 ORTHO05D007750 5.5e-27 124.8 87 64.4
Mapoly0073s0070 Marchantia polymorpha HOM05D006118 ORTHO05D007750 7.2e-27 124.4 99 56.6
DCAR_003726 Daucus carota HOM05D006118 ORTHO05D007750 2.1e-26 122.9 105 59.0
Zm00001eb278600 Zea mays HOM05D006118 ORTHO05D007750 2.7e-26 122.5 89 64.0
Pp3c9_15980 Physcomitrium patens HOM05D006118 ORTHO05D007750 3.6e-26 122.1 87 63.2
BcaB01g03835 Brassica carinata HOM05D006118 ORTHO05D007750 4.4e-24 115.2 86 64.0
BcaB01g01553 Brassica carinata HOM05D006118 ORTHO05D007750 5.7e-24 114.8 92 60.9
CBR_g36835 Chara braunii HOM05D006118 ORTHO05D007750 9.8e-24 114.0 96 55.2
SalBow1G5335 Salvia bowleyana HOM05D006118 ORTHO05D007750 4.1e-22 108.6 156 42.9
Lj7A209G43 Lonicera japonica HOM05D006118 ORTHO05D007750 2.0e-21 106.3 132 48.5
Nitab4.5_0001576g0100 Nicotiana tabacum HOM05D006118 ORTHO05D007750 9.5e-19 97.4 106 54.7
MD15G1048300 Malus domestica HOM05D006118 ORTHO05D007750 3.6e-18 95.5 78 55.1
BcaB08g36375 Brassica carinata HOM05D006118 ORTHO05D007750 6.1e-18 94.7 86 55.8
Ah.12g061330 Amaranthus hybridus HOM05D006118 ORTHO05D007750 3.7e-15 85.5 67 59.7
AUR62020280 Chenopodium quinoa HOM05D006118 ORTHO05D007750 2.0e-13 79.7 89 51.7
PGSC0003DMG401012996 Solanum tuberosum HOM05D006118 ORTHO05D007750 2.7e-13 79.3 58 67.2
BcaB07g32513 Brassica carinata HOM05D006118 ORTHO05D007750 1.1e-11 73.9 49 63.3
Lalb_Chr23g0268011 Lupinus albus HOM05D006118 ORTHO05D007750 2.1e-10 69.7 57 59.6
AUR62037725 Chenopodium quinoa HOM05D006118 ORTHO05D007750 4.7e-10 68.6 89 47.2
arahy.Tifrunner.gnm1.ann1.C1NZN8 Arachis hypogaea HOM05D006118 ORTHO05D007750 2.0e-08 63.2 40 70.0
arahy.Tifrunner.gnm1.ann1.K6H74S Arachis hypogaea HOM05D006118 ORTHO05D007750 2.0e-08 63.2 40 70.0
Hund25545 Selenicereus undatus HOM05D006118 ORTHO05D007750 2.6e-08 62.8 102 36.3
Nitab4.5_0009849g0030 Nicotiana tabacum HOM05D006118 ORTHO05D007750 3.4e-08 62.4 38 76.3
Aa31LG10G5490 Aethionema arabicum HOM05D006118 ORTHO05D007750 4.4e-08 62.0 116 37.9
Peaxi162Scf00486g00116 Petunia axillaris HOM05D006118 ORTHO05D007750 4.4e-08 62.0 41 68.3
EL10Ac2g02406 Beta vulgaris HOM05D006118 ORTHO05D007750 7.5e-08 61.2 49 53.1
unitig_8.g4842 Utricularia gibba HOM05D006118 ORTHO05D007750 9.8e-08 60.8 38 73.7
MCO03G156 Micromonas commoda HOM05D006118 ORTHO05D007750 2.9e-07 59.3 84 38.1
HPP92_016236 Vanilla planifolia HOM05D006118 ORTHO05D007750 4.9e-07 58.5 37 70.3
PRCOL_00005697 Prasinoderma coloniale HOM05D006118 ORTHO05D007750 9.2e-06 54.3 71 31.0


User provided reference genes

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