Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0684G024 Amborella trichopoda HOM05D000135 ORTHO05D000203 2.3e-72 275.4 135 100.0
ATR0684G088 Amborella trichopoda HOM05D000227 ORTHO05D000203 2.5e-26 122.5 142 52.8
Prupe.1G505300 Prunus persica HOM05D000135 ORTHO05D000203 5.6e-10 68.2 109 39.4
DCAR_008248 Daucus carota HOM05D000227 ORTHO05D000203 1.3e-09 67.0 97 40.2
Sabra02G0069700 Salix brachista HOM05D000227 ORTHO05D000203 1.3e-09 67.0 97 38.1
TWI56G1099 Tripterygium wilfordii HOM05D000227 ORTHO05D000203 1.6e-09 66.6 112 38.4
Cc07_g19000 Coffea canephora HOM05D000227 ORTHO05D000203 2.1e-09 66.2 108 38.0
FAN13G2913 Fragaria x ananassa HOM05D000135 ORTHO05D000203 2.1e-09 66.2 109 38.5
CiPaw.06G025500 Carya illinoinensis HOM05D000227 ORTHO05D000203 3.7e-09 65.5 99 38.4
TAR628G0103 Trochodendron aralioides HOM05D000227 ORTHO05D000203 3.7e-09 65.5 97 41.2
FvH4_5g39020 Fragaria vesca HOM05D000135 ORTHO05D000203 4.8e-09 65.1 109 37.6
FAN08G2224 Fragaria x ananassa HOM05D000135 ORTHO05D000203 4.8e-09 65.1 109 37.6
FAN18G2401 Fragaria x ananassa HOM05D000135 ORTHO05D000203 4.8e-09 65.1 109 37.6
Cfa015965 Carpinus fangiana HOM05D002940 ORTHO05D003344 6.2e-09 64.7 123 38.2
FAN04G1366 Fragaria x ananassa HOM05D000135 ORTHO05D000203 6.2e-09 64.7 108 38.0
Atru.chr13.1324 Acer truncatum HOM05D000227 ORTHO05D000203 8.2e-09 64.3 124 33.1
Atru.chr13.1368 Acer truncatum HOM05D000227 ORTHO05D000203 8.2e-09 64.3 124 33.1
Manes.02G159200 Manihot esculenta HOM05D000227 ORTHO05D000203 8.2e-09 64.3 105 38.1
Phvul.008G167700 Phaseolus vulgaris HOM05D000227 ORTHO05D000203 8.2e-09 64.3 108 34.3
Haze_00517 Corylus avellana HOM05D002940 ORTHO05D003344 1.4e-08 63.5 139 36.7
MD15G1357800 Malus domestica HOM05D000227 ORTHO05D000203 1.4e-08 63.5 122 33.6
TPR.G39305 Trifolium pratense HOM05D000135 ORTHO05D000203 1.4e-08 63.5 97 37.1
Lalb_Chr10g0101971 Lupinus albus HOM05D000227 ORTHO05D000203 1.8e-08 63.2 97 37.1
ClCG11G015540 Citrullus lanatus HOM05D000135 ORTHO05D000203 2.4e-08 62.8 109 36.7
Glyma.13G083700 Glycine max HOM05D000227 ORTHO05D000203 2.4e-08 62.8 108 34.3
Medtr5g027000 Medicago truncatula HOM05D000135 ORTHO05D000203 2.4e-08 62.8 97 37.1
Rhsim06G0108600 Rhododendron simsii HOM05D000227 ORTHO05D000203 2.4e-08 62.8 107 38.3
Ciclev10002752m.g Citrus clementina HOM05D000227 ORTHO05D000203 3.1e-08 62.4 124 31.5
Thecc.08G117600 Theobroma cacao HOM05D000227 ORTHO05D000203 5.3e-08 61.6 108 36.1
Aqoxy6G00152 Aquilegia oxysepala HOM05D000227 ORTHO05D000203 6.9e-08 61.2 121 36.4
Potri.002G088500 Populus trichocarpa HOM05D000227 ORTHO05D000203 6.9e-08 61.2 114 31.6
GSVIVG01008934001 Vitis vinifera HOM05D000227 ORTHO05D000203 6.9e-08 61.2 125 37.6
Oeu054492.1 Olea europaea HOM05D000227 ORTHO05D000203 1.2e-07 60.5 108 34.3
Cpa.g.sc49.139 Carica papaya HOM05D000135 ORTHO05D000203 1.5e-07 60.1 111 36.9
Atru.chr13.1331 Acer truncatum HOM05D002940 ORTHO05D000203 2.0e-07 59.7 100 32.0
Atru.chr13.1374 Acer truncatum HOM05D002940 ORTHO05D000203 2.0e-07 59.7 100 32.0
CsaV3_4G028540 Cucumis sativus L. HOM05D000227 ORTHO05D000203 2.6e-07 59.3 114 33.3
COL.COLO4_32798 Corchorus olitorius HOM05D000227 ORTHO05D000203 4.5e-07 58.5 98 33.7
Duzib041G0163 Durio zibethinus HOM05D000227 ORTHO05D000203 5.8e-07 58.2 58 50.0
CDE11G0709 Ceratophyllum demersum HOM05D000135 ORTHO05D000203 1.0e-06 57.4 121 29.8
Phvul.002G320800 Phaseolus vulgaris HOM05D000135 ORTHO05D000203 1.0e-06 57.4 104 31.7
RcHm_v2.0_Chr7g0240981 Rosa chinensis HOM05D000227 ORTHO05D000203 1.0e-06 57.4 109 34.9
Nn1g08620 Nelumbo nucifera HOM05D000227 ORTHO05D000203 1.3e-06 57.0 108 34.3
Sed0011944 Sechium edule HOM05D000135 ORTHO05D000203 2.2e-06 56.2 97 37.1
MELO3C010454.2 Cucumis melo HOM05D000227 ORTHO05D000203 3.8e-06 55.5 97 35.1
Peaxi162Scf00404g00009 Petunia axillaris HOM05D005899 ORTHO05D007445 3.8e-06 55.5 52 51.9
Prupe.8G060000 Prunus persica HOM05D000135 ORTHO05D000203 3.8e-06 55.5 97 37.1
Lsat_1_v5_gn_8_41821 Lactuca sativa HOM05D000135 ORTHO05D000203 4.9e-06 55.1 108 33.3
Nitab4.5_0009467g0010 Nicotiana tabacum HOM05D000135 ORTHO05D000203 4.9e-06 55.1 108 30.6
Nitab4.5_0011970g0010 Nicotiana tabacum HOM05D000135 ORTHO05D000203 4.9e-06 55.1 108 30.6
VMungo0251G1448 Vigna mungo HOM05D000135 ORTHO05D000203 4.9e-06 55.1 129 28.7
EL10Ac1g00489 Beta vulgaris HOM05D000135 ORTHO05D000203 8.4e-06 54.3 108 28.7


User provided reference genes

Program Settings