Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0684G011 Amborella trichopoda HOM05D003443 ORTHO05D009887 6.6e-145 517.3 253 100.0
TAR628G0851 Trochodendron aralioides HOM05D003443 ORTHO05D009887 4.5e-61 238.8 261 45.6
Nn5g28161 Nelumbo nucifera HOM05D003443 ORTHO05D009887 1.9e-59 233.4 261 45.6
Cfa015987 Carpinus fangiana HOM05D003443 ORTHO05D009887 4.0e-57 225.7 259 43.2
QL09p035320 Quercus lobata HOM05D003443 ORTHO05D009887 1.3e-55 220.7 264 42.4
GSVIVG01008903001 Vitis vinifera HOM05D003443 ORTHO05D009887 1.3e-55 220.7 261 44.4
Atru.chr13.1406 Acer truncatum HOM05D003443 ORTHO05D009887 2.0e-53 213.4 258 41.1
Phvul.008G165600 Phaseolus vulgaris HOM05D003443 ORTHO05D009887 3.5e-53 212.6 248 43.1
CANSAT25G3703 Cannabis sativa HOM05D003443 ORTHO05D009887 4.5e-53 212.2 257 41.6
MD08G1168100 Malus domestica HOM05D003443 ORTHO05D009887 2.3e-52 209.9 263 41.8
VMungo0647G1328 Vigna mungo HOM05D003443 ORTHO05D009887 2.3e-52 209.9 260 40.8
Psat2g078480 Pisum sativum HOM05D003443 ORTHO05D009887 8.6e-52 208.0 258 43.0
TWI56G0082 Tripterygium wilfordii HOM05D003443 ORTHO05D009887 8.6e-52 208.0 260 41.5
Thecc.08G121100 Theobroma cacao HOM05D003443 ORTHO05D009887 1.2e-50 204.1 254 42.1
Prupe.1G501800 Prunus persica HOM05D003443 ORTHO05D009887 2.8e-50 203.0 263 39.5
Ca_03725_v3 Cicer arietinum L. HOM05D003443 ORTHO05D009887 3.6e-50 202.6 258 40.7
Eucgr.F03767 Eucalyptus grandis HOM05D003443 ORTHO05D009887 3.6e-50 202.6 260 39.6
CsaV3_4G028430 Cucumis sativus L. HOM05D003443 ORTHO05D009887 4.7e-50 202.2 260 40.8
Gohir.A05G233300 Gossypium hirsutum HOM05D003443 ORTHO05D009887 6.1e-50 201.8 256 40.6
Gorai.009G244000 Gossypium raimondii HOM05D003443 ORTHO05D009887 1.4e-49 200.7 253 40.7
Lsat_1_v5_gn_1_8320 Lactuca sativa HOM05D003443 ORTHO05D009887 1.8e-49 200.3 258 39.9
Lj7C333G3 Lonicera japonica HOM05D003443 ORTHO05D009887 1.8e-49 200.3 284 38.4
Medtr5g059070 Medicago truncatula HOM05D003443 ORTHO05D009887 1.8e-49 200.3 258 39.9
Lj1g0008620 Lotus japonicus HOM05D003443 ORTHO05D009887 5.2e-49 198.7 259 39.8
Aqoxy5G02443 Aquilegia oxysepala HOM05D003443 ORTHO05D009887 6.8e-49 198.4 261 40.2
ClCG11G015590 Citrullus lanatus HOM05D003443 ORTHO05D009887 2.6e-48 196.4 260 39.6
Lalb_Chr10g0101921 Lupinus albus HOM05D003443 ORTHO05D009887 7.5e-48 194.9 258 39.9
Nitab4.5_0010023g0010 Nicotiana tabacum HOM05D003443 ORTHO05D009887 7.5e-48 194.9 260 39.2
QL09p036517 Quercus lobata HOM05D003443 ORTHO05D009887 7.5e-48 194.9 218 43.6
Sabra05G0132100 Salix brachista HOM05D003443 ORTHO05D009887 7.5e-48 194.9 258 39.5
DCAR_003542 Daucus carota HOM05D003443 ORTHO05D009887 9.8e-48 194.5 261 38.3
ECA247G0446 Erigeron canadensis HOM05D003443 ORTHO05D009887 2.2e-47 193.4 259 36.7
arahy.Tifrunner.gnm1.ann1.5F0RSX Arachis hypogaea HOM05D003443 ORTHO05D009887 3.7e-47 192.6 260 39.2
PGSC0003DMG400014817 Solanum tuberosum HOM05D003443 ORTHO05D009887 4.9e-47 192.2 261 38.3
Solyc03g093210.3 Solanum lycopersicum HOM05D003443 ORTHO05D009887 6.3e-47 191.8 260 38.5
Manes.02G161000 Manihot esculenta HOM05D003443 ORTHO05D009887 8.3e-47 191.4 258 38.0
Hund16841 Selenicereus undatus HOM05D003443 ORTHO05D009887 8.3e-47 191.4 259 38.6
HanXRQChr04g0111631 Helianthus annuus HOM05D003443 ORTHO05D009887 1.1e-46 191.0 259 37.8
arahy.Tifrunner.gnm1.ann1.JR3K98 Arachis hypogaea HOM05D003443 ORTHO05D009887 1.4e-46 190.7 260 39.2
Sed0010337 Sechium edule HOM05D003443 ORTHO05D009887 2.4e-46 189.9 260 38.5
Nitab4.5_0002816g0090 Nicotiana tabacum HOM05D003443 ORTHO05D009887 1.6e-45 187.2 260 38.5
MELO3C010459.2 Cucumis melo HOM05D003443 ORTHO05D009887 3.5e-45 186.0 264 39.0
RcHm_v2.0_Chr6g0295331 Rosa chinensis HOM05D003443 ORTHO05D009887 3.5e-45 186.0 259 39.0
Migut.C01151 Erythranthe guttata HOM05D003443 ORTHO05D009887 4.5e-45 185.7 261 40.2
FAN15G1193 Fragaria x ananassa HOM05D002169 ORTHO05D006927 4.5e-45 185.7 259 38.6
CAN.G48.26 Capsicum annuum HOM05D003443 ORTHO05D009887 5.9e-45 185.3 258 38.0
Actinidia25684 Actinidia chinensis HOM05D003443 ORTHO05D009887 1.3e-44 184.1 267 40.8
FvH4_2g26511 Fragaria vesca HOM05D003443 ORTHO05D009887 1.3e-44 184.1 261 38.3
RhsimUnG0094800 Rhododendron simsii HOM05D003443 ORTHO05D009887 5.0e-44 182.2 290 36.6
MSTRG.1462 Avicennia marina HOM05D003443 ORTHO05D009887 6.6e-44 181.8 261 36.4
SalBow7G0745 Salvia bowleyana HOM05D003443 ORTHO05D009887 1.0e-41 174.5 261 35.6
TPR.G8502 Trifolium pratense HOM05D003443 ORTHO05D009887 8.9e-41 171.4 217 40.1
Sc01g0001370 Simmondsia chinensis HOM05D003443 ORTHO05D009887 2.0e-40 170.2 213 40.8
Haze_00482 Corylus avellana HOM05D003443 ORTHO05D009887 3.4e-40 169.5 259 35.9
SalBow7G1610 Salvia bowleyana HOM05D003443 ORTHO05D009887 5.8e-40 168.7 261 35.2
Glyma.14G162900 Glycine max HOM05D003443 ORTHO05D009887 7.5e-40 168.3 200 42.0
MBI06_g35594_MAGBIO Magnolia biondii HOM05D003443 ORTHO05D009887 1.8e-38 163.7 228 41.7
FAN27G2831 Fragaria x ananassa HOM05D003443 ORTHO05D009887 3.0e-36 156.4 238 37.4
MBI06_g02575_MAGBIO Magnolia biondii HOM05D003443 ORTHO05D009887 3.3e-35 152.9 141 55.3
Duzib093G0763 Durio zibethinus HOM05D003443 ORTHO05D009887 2.8e-34 149.8 189 39.2
AUR62004719 Chenopodium quinoa HOM05D003443 ORTHO05D009887 8.9e-33 144.8 214 33.6
SGA_v2.0_scaffold52G18985 Striga asiatica HOM05D003443 ORTHO05D009887 1.5e-32 144.1 261 32.2
EL10Ac1g00011 Beta vulgaris HOM05D003443 ORTHO05D009887 4.1e-30 136.0 259 32.0
AUR62023638 Chenopodium quinoa HOM05D003443 ORTHO05D009887 2.7e-29 133.3 208 31.7
Oeu050896.1 Olea europaea HOM05D003443 ORTHO05D009887 3.0e-28 129.8 287 30.3
Potri.005G174900 Populus trichocarpa HOM05D003443 ORTHO05D009887 1.2e-26 124.4 149 42.3
Cc10_g11020 Coffea canephora HOM05D003443 ORTHO05D009887 1.8e-25 120.6 151 43.0
vmacro00815 Vaccinium macrocarpon HOM05D003443 ORTHO05D009887 2.3e-25 120.2 257 31.1
Medtr5g459020 Medicago truncatula HOM05D003443 ORTHO05D009887 8.9e-25 118.2 176 33.5
Peaxi162Scf00241g00037 Petunia axillaris HOM05D003443 ORTHO05D009887 8.9e-25 118.2 249 32.1
Sopen03g024010 Solanum pennellii HOM05D003443 ORTHO05D009887 3.1e-17 93.2 133 34.6
Lj7E334T0 Lonicera japonica HOM05D003443 ORTHO05D009887 2.6e-16 90.1 81 53.1
Cc10_g11010 Coffea canephora HOM05D003443 ORTHO05D009887 1.6e-13 80.9 91 34.1
PGSC0003DMG400021471 Solanum tuberosum HOM05D003443 ORTHO05D009887 6.6e-12 75.5 86 46.5
COL.COLO4_12190 Corchorus olitorius HOM05D003443 ORTHO05D009887 1.6e-10 70.9 76 46.1
MBI06_g44274_MAGBIO Magnolia biondii HOM05D003443 ORTHO05D009887 2.6e-08 63.5 65 46.2


User provided reference genes

Program Settings