Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0684G009 Amborella trichopoda HOM05D003881 ORTHO05D004343 1.3e-128 463.0 230 100.0
ATR0598G033 Amborella trichopoda HOM05D003881 ORTHO05D004343 3.5e-92 342.0 388 53.1
MBI19_g11836_MAGBIO Magnolia biondii HOM05D003881 ORTHO05D004343 9.1e-77 290.8 385 44.4
TAR383G1047 Trochodendron aralioides HOM05D003881 ORTHO05D004343 2.7e-76 289.3 387 44.2
Nn8g38678 Nelumbo nucifera HOM05D003881 ORTHO05D004343 4.0e-72 275.4 387 42.6
PSO135G0960 Papaver somniferum HOM05D003881 ORTHO05D004343 4.8e-70 268.5 387 42.1
PSO724G0120 Papaver somniferum HOM05D003881 ORTHO05D004343 8.3e-70 267.7 387 42.1
CAN.G457.4 Capsicum annuum HOM05D003881 ORTHO05D004343 5.0e-67 258.5 387 40.3
CDE06G1176 Ceratophyllum demersum HOM05D003881 ORTHO05D004343 1.1e-66 257.3 387 41.1
Duzib150G0508 Durio zibethinus HOM05D003881 ORTHO05D004343 5.5e-66 255.0 300 46.7
arahy.Tifrunner.gnm1.ann1.13CNWC Arachis hypogaea HOM05D003881 ORTHO05D004343 1.8e-64 250.0 388 39.7
arahy.Tifrunner.gnm1.ann1.3W29E4 Arachis hypogaea HOM05D003881 ORTHO05D004343 1.8e-64 250.0 388 39.7
Aqoxy5G02361 Aquilegia oxysepala HOM05D003881 ORTHO05D004343 5.2e-64 248.4 387 39.8
Actinidia29923 Actinidia chinensis HOM05D003881 ORTHO05D004343 8.9e-64 247.7 387 38.5
Nitab4.5_0000343g0070 Nicotiana tabacum HOM05D003881 ORTHO05D004343 8.9e-64 247.7 421 37.8
GSVIVG01015096001 Vitis vinifera HOM05D003881 ORTHO05D004343 1.5e-63 246.9 384 39.8
TWI34G0082 Tripterygium wilfordii HOM05D003881 ORTHO05D004343 2.0e-63 246.5 387 39.5
Potri.006G143300 Populus trichocarpa HOM05D003881 ORTHO05D004343 4.4e-63 245.4 388 39.4
Lj6g0005202 Lotus japonicus HOM05D003881 ORTHO05D004343 7.5e-63 244.6 388 38.7
Sabra06G0112200 Salix brachista HOM05D003881 ORTHO05D004343 1.3e-62 243.8 388 39.4
Sabra06G0113500 Salix brachista HOM05D003881 ORTHO05D004343 1.3e-62 243.8 388 39.4
TPR.G28668 Trifolium pratense HOM05D003881 ORTHO05D004343 1.7e-62 243.4 388 39.4
Glyma.09G068600 Glycine max HOM05D003881 ORTHO05D004343 2.2e-62 243.0 388 38.4
Eucgr.C00824 Eucalyptus grandis HOM05D003881 ORTHO05D004343 3.7e-62 242.3 375 38.9
FAN26G0375 Fragaria x ananassa HOM05D003881 ORTHO05D004343 3.7e-62 242.3 386 38.3
FAN26G1433 Fragaria x ananassa HOM05D003881 ORTHO05D004343 3.7e-62 242.3 386 38.3
ClCG03G015190 Citrullus lanatus HOM05D003881 ORTHO05D004343 4.9e-62 241.9 388 38.7
CsaV3_1G040850 Cucumis sativus L. HOM05D003881 ORTHO05D004343 6.3e-62 241.5 388 38.7
FvH4_1g08430 Fragaria vesca HOM05D003881 ORTHO05D004343 6.3e-62 241.5 386 38.3
FAN19G1850 Fragaria x ananassa HOM05D003881 ORTHO05D004343 6.3e-62 241.5 386 38.3
Prupe.7G201100 Prunus persica HOM05D003881 ORTHO05D004343 8.3e-62 241.1 387 38.5
MD02G1088500 Malus domestica HOM05D003881 ORTHO05D004343 1.1e-61 240.7 387 38.5
Ca_26333_v3 Cicer arietinum L. HOM05D003881 ORTHO05D004343 1.4e-61 240.4 388 38.4
Rhsim03G0228800 Rhododendron simsii HOM05D003881 ORTHO05D004343 1.4e-61 240.4 383 37.9
CSS0040077 Camellia sinensis var. sinensis HOM05D003881 ORTHO05D004343 1.8e-61 240.0 387 38.0
FAN28G2111 Fragaria x ananassa HOM05D003881 ORTHO05D004343 1.8e-61 240.0 386 38.1
Psat1g133400 Pisum sativum HOM05D003881 ORTHO05D004343 1.8e-61 240.0 388 38.9
MELO3C015512.2 Cucumis melo HOM05D003881 ORTHO05D004343 2.4e-61 239.6 388 38.4
Rhsim01G0044300 Rhododendron simsii HOM05D003881 ORTHO05D004343 2.4e-61 239.6 383 37.6
RcHm_v2.0_Chr2g0094531 Rosa chinensis HOM05D003881 ORTHO05D004343 3.1e-61 239.2 387 37.7
Lalb_Chr11g0074291 Lupinus albus HOM05D003881 ORTHO05D004343 5.4e-61 238.4 388 38.9
Dinv42377 Davidia involucrata HOM05D003881 ORTHO05D004343 7.0e-61 238.0 375 39.2
Rhsim01G0044500 Rhododendron simsii HOM05D003881 ORTHO05D004343 7.0e-61 238.0 383 37.3
MSTRG.26461 Avicennia marina HOM05D003881 ORTHO05D004343 2.7e-60 236.1 386 37.3
Glyma.15G176400 Glycine max HOM05D003881 ORTHO05D004343 2.7e-60 236.1 381 38.3
Medtr2g041420 Medicago truncatula HOM05D003881 ORTHO05D004343 5.9e-60 235.0 384 38.5
HanXRQChr12g0354081 Helianthus annuus HOM05D003881 ORTHO05D004343 7.8e-60 234.6 385 37.9
Peaxi162Scf00127g00019 Petunia axillaris HOM05D003881 ORTHO05D004343 7.8e-60 234.6 161 68.9
Phvul.009G228100 Phaseolus vulgaris HOM05D003881 ORTHO05D004343 7.8e-60 234.6 384 38.3
Sed0009854 Sechium edule HOM05D003881 ORTHO05D004343 7.8e-60 234.6 387 38.2
Manes.16G096500 Manihot esculenta HOM05D003881 ORTHO05D004343 1.0e-59 234.2 371 38.8
Oeu018066.1 Olea europaea HOM05D003881 ORTHO05D004343 1.0e-59 234.2 386 37.3
Nitab4.5_0001488g0030 Nicotiana tabacum HOM05D003881 ORTHO05D004343 1.3e-59 233.8 161 68.9
CiPaw.03G207700 Carya illinoinensis HOM05D003881 ORTHO05D004343 1.7e-59 233.4 374 38.2
Lsat_1_v5_gn_5_141221 Lactuca sativa HOM05D003881 ORTHO05D004343 3.9e-59 232.3 384 37.8
Dinv25567 Davidia involucrata HOM05D003881 ORTHO05D004343 8.6e-59 231.1 370 38.6
ECA232G2980 Erigeron canadensis HOM05D003881 ORTHO05D004343 1.1e-58 230.7 384 37.5
Migut.L01552 Erythranthe guttata HOM05D003881 ORTHO05D004343 2.5e-58 229.6 387 35.9
PGR142G3183 Punica granatum HOM05D003881 ORTHO05D004343 7.3e-58 228.0 364 38.5
Sopen07g027960 Solanum pennellii HOM05D003674 ORTHO05D004343 9.5e-58 227.6 161 67.1
CANSAT56G1084 Cannabis sativa HOM05D003881 ORTHO05D004343 1.2e-57 227.3 390 38.2
Gohir.A07G014800 Gossypium hirsutum HOM05D003881 ORTHO05D004343 1.6e-57 226.9 370 38.1
Lj7A685T51 Lonicera japonica HOM05D003881 ORTHO05D004343 1.6e-57 226.9 387 35.9
Haze_25986 Corylus avellana HOM05D003881 ORTHO05D004343 2.1e-57 226.5 372 37.9
Haze_25994 Corylus avellana HOM05D003881 ORTHO05D004343 2.1e-57 226.5 372 37.9
COL.COLO4_18111 Corchorus olitorius HOM05D003881 ORTHO05D004343 2.8e-57 226.1 370 37.8
Atru.chr7.1693 Acer truncatum HOM05D003881 ORTHO05D004343 3.6e-57 225.7 370 38.4
Thecc.09G079000 Theobroma cacao HOM05D003881 ORTHO05D004343 3.6e-57 225.7 369 37.9
Gohir.D07G014500 Gossypium hirsutum HOM05D003881 ORTHO05D004343 4.7e-57 225.3 370 37.8
Gorai.001G015300 Gossypium raimondii HOM05D003881 ORTHO05D004343 4.7e-57 225.3 370 37.8
SalBow4G1287 Salvia bowleyana HOM05D003881 ORTHO05D004343 6.1e-57 224.9 396 35.9
Solyc07g041510.3 Solanum lycopersicum HOM05D003881 ORTHO05D004343 6.1e-57 224.9 161 66.5
QL11p000475 Quercus lobata HOM05D003881 ORTHO05D004343 1.4e-56 223.8 162 65.4
THA.LOC104815327 Tarenaya hassleriana HOM05D003881 ORTHO05D004343 2.3e-56 223.0 388 36.6
Cfa003017 Carpinus fangiana HOM05D003881 ORTHO05D004343 3.1e-56 222.6 372 37.1
SEGI_24391 Sequoiadendron giganteum HOM05D003881 ORTHO05D004343 4.0e-56 222.2 387 37.5
Carub.0003s2725 Capsella rubella HOM05D003881 ORTHO05D004343 6.8e-56 221.5 386 36.8
AL3G43760 Arabidopsis lyrata HOM05D003881 ORTHO05D004343 1.2e-55 220.7 386 36.8
CARHR103800 Cardamine hirsuta HOM05D003881 ORTHO05D004343 1.5e-55 220.3 386 36.5
Ciclev10007295m.g Citrus clementina HOM05D003881 ORTHO05D004343 2.6e-55 219.5 370 37.6
SGA_v2.0_scaffold21G09481 Striga asiatica HOM05D003881 ORTHO05D004343 3.4e-55 219.2 395 35.4
DCAR_024741 Daucus carota HOM05D003881 ORTHO05D004343 5.8e-55 218.4 387 35.7
DCAR_031930 Daucus carota HOM05D003881 ORTHO05D004343 5.8e-55 218.4 387 35.7
Thhalv10002377m.g Eutrema salsugineum HOM05D003881 ORTHO05D004343 9.8e-55 217.6 386 36.8
vmacro06329 Vaccinium macrocarpon HOM05D003881 ORTHO05D004343 1.3e-54 217.2 161 63.4
Aa31sc133G100 Aethionema arabicum HOM05D003881 ORTHO05D004343 2.2e-54 216.5 386 36.3
BcaB08g34515 Brassica carinata HOM05D003881 ORTHO05D004343 2.2e-54 216.5 386 36.0
Cc06_g12030 Coffea canephora HOM05D003881 ORTHO05D004343 8.3e-54 214.5 380 35.3
HPP92_007226 Vanilla planifolia HOM05D003881 ORTHO05D004343 1.4e-53 213.8 160 62.5
BcaC01g03143 Brassica carinata HOM05D003881 ORTHO05D004343 1.9e-53 213.4 386 35.8
A03p44780 Brassica napus HOM05D003881 ORTHO05D004343 1.9e-53 213.4 387 35.7
BraA03t13613Z Brassica rapa HOM05D003881 ORTHO05D004343 1.9e-53 213.4 387 35.7
C03p55630 Brassica napus HOM05D003881 ORTHO05D004343 2.4e-53 213.0 387 35.7
BolC3t17840H Brassica oleracea HOM05D003881 ORTHO05D004343 2.4e-53 213.0 387 35.7
Sp3g24670 Schrenkiella parvula HOM05D003881 ORTHO05D004343 2.4e-53 213.0 385 35.8
Duzib168G2095 Durio zibethinus HOM05D003881 ORTHO05D004343 3.5e-52 209.1 338 39.3
AUR62025189 Chenopodium quinoa HOM05D003881 ORTHO05D004343 1.0e-51 207.6 355 37.2
Sc14g0000600 Simmondsia chinensis HOM05D003881 ORTHO05D004343 1.3e-51 207.2 389 35.7
TAR383G0300 Trochodendron aralioides HOM05D003881 ORTHO05D004343 1.7e-51 206.8 334 39.2
Zm00001eb073540 Zea mays HOM05D003881 ORTHO05D004343 9.5e-50 201.1 390 35.4
SMO143G0189 Selaginella moellendorffii HOM05D003881 ORTHO05D004343 1.8e-48 196.8 383 33.7
Ah.14g084990 Amaranthus hybridus HOM05D003881 ORTHO05D004343 2.3e-48 196.4 389 33.7
AUR62028984 Chenopodium quinoa HOM05D003881 ORTHO05D004343 6.8e-48 194.9 389 33.9
Mapoly0010s0036 Marchantia polymorpha HOM05D003881 ORTHO05D004343 5.8e-47 191.8 375 35.7
Oeu041279.1 Olea europaea HOM05D003881 ORTHO05D004343 1.7e-46 190.3 153 58.2
Hund26018 Selenicereus undatus HOM05D003881 ORTHO05D004343 9.2e-45 184.5 389 33.2
EL10Ac8g19107 Beta vulgaris HOM05D003881 ORTHO05D004343 1.2e-44 184.1 150 55.3
Cpa.g.sc28.63 Carica papaya HOM05D003881 ORTHO05D004343 7.8e-44 181.4 135 62.2
Pp3c3_17140 Physcomitrium patens HOM05D003881 ORTHO05D004343 1.6e-41 173.7 174 50.0
AagrBONN_evm.TU.Sc2ySwM_344.1648 Anthoceros agrestis HOM05D003881 ORTHO05D004343 4.4e-39 165.6 366 31.4
Psat4g185720 Pisum sativum HOM05D003881 ORTHO05D004343 3.2e-37 159.5 128 63.3
unitig_8.g3529 Utricularia gibba HOM05D003881 ORTHO05D004343 1.2e-31 141.0 331 30.8
Peaxi162Scf00127g00018 Petunia axillaris HOM05D003881 ORTHO05D004343 9.9e-23 111.3 178 37.1
Sopen07g021070 Solanum pennellii HOM05D003881 ORTHO05D004343 9.9e-23 111.3 181 38.1
QL01p053501 Quercus lobata HOM05D003881 ORTHO05D004343 2.9e-22 109.8 86 59.3
Psat1g034120 Pisum sativum HOM05D003881 ORTHO05D004343 4.9e-22 109.0 141 44.0
QL04p095684 Quercus lobata HOM05D003881 ORTHO05D004343 1.2e-20 104.4 82 58.5
QL03p010974 Quercus lobata HOM05D003881 ORTHO05D004343 1.0e-19 101.3 97 52.6
HPP92_006870 Vanilla planifolia HOM05D003881 ORTHO05D004343 6.6e-19 98.6 81 60.5
CBR_g74627 Chara braunii HOM05D003881 ORTHO05D004343 2.5e-18 96.7 115 42.6
HPP92_006853 Vanilla planifolia HOM05D003881 ORTHO05D004343 4.3e-18 95.9 73 64.4
SEGI_39855 Sequoiadendron giganteum HOM05D003881 ORTHO05D004343 1.2e-12 77.8 65 64.6
HPP92_026934 Vanilla planifolia HOM05D003881 ORTHO05D004343 6.0e-12 75.5 67 58.2
SEGI_11752 Sequoiadendron giganteum HOM05D003881 ORTHO05D004343 7.9e-12 75.1 128 39.1
TAR383G0903 Trochodendron aralioides HOM05D003881 ORTHO05D004343 1.8e-11 73.9 43 74.4
Actinidia38472 Actinidia chinensis HOM05D003881 ORTHO05D004343 7.4e-10 68.6 51 62.7
HPP92_012555 Vanilla planifolia HOM05D003881 ORTHO05D004343 7.4e-10 68.6 44 75.0
Thhalv10002929m.g Eutrema salsugineum HOM05D003881 ORTHO05D004343 1.1e-08 64.7 73 49.3
Psat0s7528g0040 Pisum sativum HOM05D003881 ORTHO05D004343 2.6e-07 60.1 167 28.7
Psat1g059560 Pisum sativum HOM05D003881 ORTHO05D004343 2.6e-07 60.1 167 28.7
MD15G1215900 Malus domestica HOM05D003881 ORTHO05D004343 5.8e-07 58.9 77 44.2


User provided reference genes

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