Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0681G332 Amborella trichopoda HOM05D007397 ORTHO05D009336 1.5e-98 362.8 188 100.0
TAR320G0002 Trochodendron aralioides HOM05D007397 ORTHO05D009336 3.4e-45 185.7 184 55.4
MBI05_g32638_MAGBIO Magnolia biondii HOM05D007397 ORTHO05D009336 2.4e-43 179.5 147 62.6
EL10Ac2g03499 Beta vulgaris HOM05D007397 ORTHO05D009336 3.2e-43 179.1 167 57.5
CSS0023256 Camellia sinensis var. sinensis HOM05D007397 ORTHO05D009336 2.0e-42 176.4 181 54.7
ClCG09G020320 Citrullus lanatus HOM05D007397 ORTHO05D009336 3.5e-42 175.6 181 52.5
GSVIVG01032626001 Vitis vinifera HOM05D007397 ORTHO05D009336 3.5e-42 175.6 186 53.2
Glyma.06G097000 Glycine max HOM05D007397 ORTHO05D009336 6.0e-42 174.9 180 52.8
CANSAT64G2695 Cannabis sativa HOM05D007397 ORTHO05D009336 1.3e-41 173.7 184 52.7
MELO3C025487.2 Cucumis melo HOM05D007397 ORTHO05D009336 2.3e-41 172.9 177 52.0
MSTRG.7898 Avicennia marina HOM05D007397 ORTHO05D009336 3.0e-41 172.6 184 51.6
Cpa.g.sc1.304 Carica papaya HOM05D007397 ORTHO05D009336 3.0e-41 172.6 184 54.3
Glyma.04G095200 Glycine max HOM05D007397 ORTHO05D009336 3.0e-41 172.6 183 51.4
A05p37050 Brassica napus HOM05D007397 ORTHO05D009336 3.9e-41 172.2 184 54.3
BraA05t22502Z Brassica rapa HOM05D007397 ORTHO05D009336 5.0e-41 171.8 189 52.4
Carub.0003s1170 Capsella rubella HOM05D007397 ORTHO05D009336 5.0e-41 171.8 189 52.4
Lj1P929T40 Lonicera japonica HOM05D007397 ORTHO05D009336 5.0e-41 171.8 143 60.1
AL3G23990 Arabidopsis lyrata HOM05D007397 ORTHO05D009336 6.6e-41 171.4 188 54.3
BolC5t34214H Brassica oleracea HOM05D007397 ORTHO05D009336 6.6e-41 171.4 180 54.4
C05p55480 Brassica napus HOM05D007397 ORTHO05D009336 1.1e-40 170.6 180 53.9
Cfa001558 Carpinus fangiana HOM05D007397 ORTHO05D009336 1.1e-40 170.6 176 50.0
Rhsim09G0155900 Rhododendron simsii HOM05D007397 ORTHO05D009336 1.1e-40 170.6 180 53.3
Lj5g0010768 Lotus japonicus HOM05D007397 ORTHO05D009336 1.5e-40 170.2 178 52.2
Lalb_Chr06g0164111 Lupinus albus HOM05D007397 ORTHO05D009336 1.9e-40 169.9 177 53.1
CARHR086880 Cardamine hirsuta HOM05D007397 ORTHO05D009336 3.3e-40 169.1 184 52.7
BcaC05g29269 Brassica carinata HOM05D007397 ORTHO05D009336 4.3e-40 168.7 178 53.9
Cc02_g08640 Coffea canephora HOM05D007397 ORTHO05D009336 4.3e-40 168.7 171 53.8
AT3G12345 Arabidopsis thaliana HOM05D007397 ORTHO05D009336 7.3e-40 167.9 191 52.9
Sed0011140 Sechium edule HOM05D007397 ORTHO05D009336 9.5e-40 167.5 185 48.6
Haze_16973 Corylus avellana HOM05D007397 ORTHO05D009336 1.2e-39 167.2 179 50.8
Oeu044824.1 Olea europaea HOM05D007397 ORTHO05D009336 2.1e-39 166.4 167 54.5
HPP92_025097 Vanilla planifolia HOM05D007397 ORTHO05D009336 2.1e-39 166.4 185 49.7
AUR62042666 Chenopodium quinoa HOM05D007397 ORTHO05D009336 2.8e-39 166.0 160 55.6
SGA_v2.0_scaffold165G38243 Striga asiatica HOM05D007397 ORTHO05D009336 3.6e-39 165.6 186 50.5
Hma1.2p1_0348F.1_g131665 Hydrangea macrophylla HOM05D007397 ORTHO05D009336 4.7e-39 165.2 192 49.5
Hma1.2p1_0348F.1_g131670 Hydrangea macrophylla HOM05D007397 ORTHO05D009336 4.7e-39 165.2 192 49.5
Sp3g10540 Schrenkiella parvula HOM05D007397 ORTHO05D009336 4.7e-39 165.2 188 51.6
FAN03G3257 Fragaria x ananassa HOM05D007397 ORTHO05D009336 6.2e-39 164.9 180 51.1
Sc06g0001870 Simmondsia chinensis HOM05D007397 ORTHO05D009336 8.1e-39 164.5 133 60.2
Aa31sc153G60 Aethionema arabicum HOM05D007397 ORTHO05D009336 1.1e-38 164.1 185 52.4
VMungo1309G1572 Vigna mungo HOM05D007397 ORTHO05D009336 1.1e-38 164.1 183 50.3
Thhalv10021616m.g Eutrema salsugineum HOM05D007397 ORTHO05D009336 1.4e-38 163.7 184 52.7
Phvul.009G036400 Phaseolus vulgaris HOM05D007397 ORTHO05D009336 1.4e-38 163.7 183 50.3
FAN01G1406 Fragaria x ananassa HOM05D007397 ORTHO05D009336 1.8e-38 163.3 180 51.7
HanXRQChr14g0460741 Helianthus annuus HOM05D007397 ORTHO05D009336 3.1e-38 162.5 179 53.6
PGR142G1402 Punica granatum HOM05D007397 ORTHO05D009336 4.0e-38 162.2 179 48.6
CsaV3_5G026110 Cucumis sativus L. HOM05D007397 ORTHO05D009336 5.2e-38 161.8 173 52.6
FAN01G1537 Fragaria x ananassa HOM05D007397 ORTHO05D009336 6.8e-38 161.4 180 51.1
Aqoxy5G01687 Aquilegia oxysepala HOM05D007397 ORTHO05D009336 8.9e-38 161.0 195 49.7
Ca_11323_v3 Cicer arietinum L. HOM05D007397 ORTHO05D009336 8.9e-38 161.0 190 47.9
Sabra08G0033900 Salix brachista HOM05D007397 ORTHO05D009336 1.2e-37 160.6 192 47.4
BcaB04g21083 Brassica carinata HOM05D007397 ORTHO05D009336 1.5e-37 160.2 193 48.7
BcaB04g21085 Brassica carinata HOM05D007397 ORTHO05D009336 1.5e-37 160.2 193 48.7
CiPaw.01G279900 Carya illinoinensis HOM05D007397 ORTHO05D009336 1.5e-37 160.2 176 50.6
Nn2g12828 Nelumbo nucifera HOM05D007397 ORTHO05D009336 2.0e-37 159.8 191 48.7
Gohir.D10G218000 Gossypium hirsutum HOM05D007397 ORTHO05D009336 4.4e-37 158.7 189 50.3
Medtr1g115740 Medicago truncatula HOM05D007397 ORTHO05D009336 4.4e-37 158.7 191 48.2
Actinidia38224 Actinidia chinensis HOM05D007397 ORTHO05D009336 7.5e-37 157.9 177 51.4
PGSC0003DMG400011470 Solanum tuberosum HOM05D007397 ORTHO05D009336 7.5e-37 157.9 181 48.6
DCAR_015250 Daucus carota HOM05D007397 ORTHO05D009336 1.7e-36 156.8 136 59.6
Sopen04g005370 Solanum pennellii HOM05D007397 ORTHO05D009336 2.9e-36 156.0 183 47.5
SalBow2G2387 Salvia bowleyana HOM05D007397 ORTHO05D009336 3.7e-36 155.6 132 60.6
TWI38G1005 Tripterygium wilfordii HOM05D007397 ORTHO05D009336 3.7e-36 155.6 180 48.9
THA.LOC104827311 Tarenaya hassleriana HOM05D007397 ORTHO05D009336 4.9e-36 155.2 188 46.8
RcHm_v2.0_Chr1g0365021 Rosa chinensis HOM05D007397 ORTHO05D009336 6.4e-36 154.8 182 48.9
Gorai.011G244600 Gossypium raimondii HOM05D007397 ORTHO05D009336 8.3e-36 154.5 190 49.5
PSO384G5114 Papaver somniferum HOM05D007397 ORTHO05D009336 8.3e-36 154.5 190 47.9
CDE02G3908 Ceratophyllum demersum HOM05D001333 ORTHO05D001208 1.4e-35 153.7 156 51.3
Potri.010G213600 Populus trichocarpa HOM05D007397 ORTHO05D009336 2.4e-35 152.9 183 48.6
Thecc.10G062300 Theobroma cacao HOM05D007397 ORTHO05D009336 2.4e-35 152.9 192 49.0
MD07G1184800 Malus domestica HOM05D007397 ORTHO05D009336 7.1e-35 151.4 183 48.6
Migut.L01413 Erythranthe guttata HOM05D007397 ORTHO05D009336 9.2e-35 151.0 175 50.3
THA.LOC104809886 Tarenaya hassleriana HOM05D007397 ORTHO05D009336 9.2e-35 151.0 185 47.6
MBI05_g30757_MAGBIO Magnolia biondii HOM05D007397 ORTHO05D009336 3.5e-34 149.1 143 56.6
Atru.chr12.591 Acer truncatum HOM05D007397 ORTHO05D009336 6.0e-34 148.3 126 57.9
QL08p057549 Quercus lobata HOM05D007397 ORTHO05D009336 7.8e-34 147.9 192 46.4
Solyc04g010190.1 Solanum lycopersicum HOM05D007397 ORTHO05D009336 7.8e-34 147.9 181 45.9
PSO339G5749 Papaver somniferum HOM05D007397 ORTHO05D009336 1.0e-33 147.5 183 48.1
Potri.008G047800 Populus trichocarpa HOM05D007397 ORTHO05D009336 1.0e-33 147.5 192 45.3
CAN.G1557.1 Capsicum annuum HOM05D007397 ORTHO05D009336 5.1e-33 145.2 116 57.8
Psat6g239080 Pisum sativum HOM05D007397 ORTHO05D009336 5.1e-33 145.2 191 45.5
Lsat_1_v5_gn_2_115220 Lactuca sativa HOM05D005234 ORTHO05D006583 6.6e-33 144.8 179 50.3
unitig_22.g6935 Utricularia gibba HOM05D007397 ORTHO05D009336 1.9e-32 143.3 174 46.0
Gohir.A10G209700 Gossypium hirsutum HOM05D007397 ORTHO05D009336 4.3e-32 142.1 190 46.3
Prupe.2G224700 Prunus persica HOM05D007397 ORTHO05D009336 5.6e-32 141.7 177 44.6
Dinv25942 Davidia involucrata HOM05D007397 ORTHO05D009336 9.5e-32 141.0 162 53.7
TPR.G10388 Trifolium pratense HOM05D007397 ORTHO05D009336 2.1e-31 139.8 184 44.0
SEGI_38306 Sequoiadendron giganteum HOM05D007397 ORTHO05D009336 1.4e-30 137.1 186 45.7
COL.COLO4_37769 Corchorus olitorius HOM05D007397 ORTHO05D009336 3.1e-30 136.0 126 54.8
FAN10G1155 Fragaria x ananassa HOM05D007397 ORTHO05D009336 4.0e-30 135.6 171 48.5
AUR62025539 Chenopodium quinoa HOM05D007397 ORTHO05D009336 2.6e-29 132.9 164 45.7
Manes.10G039600 Manihot esculenta HOM05D007397 ORTHO05D009336 3.8e-28 129.0 89 62.9
Os06g0484500 Oryza sativa ssp. japonica HOM05D007397 ORTHO05D009336 3.8e-28 129.0 144 51.4
Ciclev10034008m.g Citrus clementina HOM05D007397 ORTHO05D009336 1.1e-27 127.5 88 64.8
Mapoly0043s0078 Marchantia polymorpha HOM05D007397 ORTHO05D009336 2.4e-27 126.3 135 47.4
Nitab4.5_0007221g0040 Nicotiana tabacum HOM05D007397 ORTHO05D009336 5.4e-27 125.2 171 41.5
Duzib106G0993 Durio zibethinus HOM05D007397 ORTHO05D009336 1.6e-26 123.6 109 55.0
Zm00001eb397310 Zea mays HOM05D007397 ORTHO05D009336 3.5e-26 122.5 182 44.5
Peaxi162Scf00135g00025 Petunia axillaris HOM05D007397 ORTHO05D009336 1.1e-24 117.5 88 61.4
SMO229G0021 Selaginella moellendorffii HOM05D007397 ORTHO05D009336 1.2e-23 114.0 145 43.4
ECA238G2043 Erigeron canadensis HOM05D005234 ORTHO05D006583 8.1e-23 111.3 137 50.4
Nitab4.5_0006737g0020 Nicotiana tabacum HOM05D007397 ORTHO05D009336 7.6e-21 104.8 146 46.6
Cfa009156 Carpinus fangiana HOM05D007397 ORTHO05D009336 7.1e-19 98.2 122 48.4
Duzib114G0919 Durio zibethinus HOM05D007397 ORTHO05D009336 5.1e-17 92.0 83 57.8
AagrBONN_evm.TU.Sc2ySwM_368.51 Anthoceros agrestis HOM05D007397 ORTHO05D009336 1.5e-16 90.5 79 54.4
C03p57580 Brassica napus HOM05D007397 ORTHO05D009336 1.7e-12 77.0 114 41.2
BcaC03g17725 Brassica carinata HOM05D007397 ORTHO05D009336 9.3e-11 71.2 108 40.7


User provided reference genes

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