Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0681G321 Amborella trichopoda HOM05D007058 ORTHO05D009036 2.7e-250 868.2 447 100.0
TAR629G3445 Trochodendron aralioides HOM05D007058 ORTHO05D009036 2.0e-136 490.0 403 63.5
TAR535G0005 Trochodendron aralioides HOM05D007058 ORTHO05D009036 3.4e-136 489.2 403 63.5
Nn3g17960 Nelumbo nucifera HOM05D007058 ORTHO05D009036 9.2e-134 481.1 400 62.0
TAR371G0970 Trochodendron aralioides HOM05D007058 ORTHO05D009036 3.0e-132 476.1 406 60.3
Dinv12229 Davidia involucrata HOM05D007058 ORTHO05D009036 4.3e-131 472.2 407 59.7
GSVIVG01008345001 Vitis vinifera HOM05D007058 ORTHO05D009036 5.8e-128 461.8 404 59.7
MBI16_g25105_MAGBIO Magnolia biondii HOM05D007058 ORTHO05D009036 1.7e-127 460.3 399 60.9
PSO782G5502 Papaver somniferum HOM05D007058 ORTHO05D009036 3.2e-126 456.1 382 62.0
Aqoxy3G04055 Aquilegia oxysepala HOM05D007058 ORTHO05D009036 1.0e-124 451.1 407 57.5
PSO063G1254 Papaver somniferum HOM05D007058 ORTHO05D009036 1.3e-124 450.7 381 61.7
Actinidia02670 Actinidia chinensis HOM05D007058 ORTHO05D009036 2.3e-124 449.9 382 61.5
Hma1.2p1_2594F.1_g325085 Hydrangea macrophylla HOM05D007058 ORTHO05D009036 8.7e-124 448.0 409 56.7
Hma1.2p1_1614F.1_g293670 Hydrangea macrophylla HOM05D007058 ORTHO05D009036 1.1e-123 447.6 403 57.1
Peaxi162Scf00683g00337 Petunia axillaris HOM05D007058 ORTHO05D009036 1.3e-122 444.1 402 58.0
Sc12g0007400 Simmondsia chinensis HOM05D007058 ORTHO05D009036 2.1e-122 443.4 400 57.0
HPP92_023400 Vanilla planifolia HOM05D007058 ORTHO05D009036 1.4e-121 440.7 399 55.9
Duzib205G0828 Durio zibethinus HOM05D007058 ORTHO05D009036 1.8e-121 440.3 409 56.0
Cpa.g.sc3.458 Carica papaya HOM05D007058 ORTHO05D009036 9.0e-121 438.0 399 56.4
PGR044G0638 Punica granatum HOM05D007058 ORTHO05D009036 9.0e-121 438.0 376 59.3
Gohir.A07G059500 Gossypium hirsutum HOM05D007058 ORTHO05D009036 1.2e-120 437.6 429 55.0
COL.COLO4_38517 Corchorus olitorius HOM05D007058 ORTHO05D009036 1.5e-120 437.2 415 55.4
Lj9A424T33 Lonicera japonica HOM05D007058 ORTHO05D009036 2.6e-120 436.4 441 54.2
Thecc.03G043100 Theobroma cacao HOM05D007058 ORTHO05D009036 3.4e-120 436.0 410 56.1
Atru.chr9.916 Acer truncatum HOM05D007058 ORTHO05D009036 4.5e-120 435.6 398 58.8
QL10p026796 Quercus lobata HOM05D007058 ORTHO05D009036 5.8e-120 435.3 409 55.0
Nitab4.5_0006894g0050 Nicotiana tabacum HOM05D007058 ORTHO05D009036 7.6e-120 434.9 404 56.9
Nitab4.5_0001456g0070 Nicotiana tabacum HOM05D007058 ORTHO05D009036 1.7e-119 433.7 404 56.7
EL10Ac5g11484 Beta vulgaris HOM05D007058 ORTHO05D009036 4.9e-119 432.2 408 54.7
FAN08G1503 Fragaria x ananassa HOM05D007058 ORTHO05D009036 4.9e-119 432.2 407 56.3
FAN04G2101 Fragaria x ananassa HOM05D007058 ORTHO05D009036 8.4e-119 431.4 407 56.5
Manes.01G015400 Manihot esculenta HOM05D007058 ORTHO05D009036 8.4e-119 431.4 405 55.1
Ciclev10020201m.g Citrus clementina HOM05D007058 ORTHO05D009036 1.4e-118 430.6 400 57.2
FAN18G2897 Fragaria x ananassa HOM05D007058 ORTHO05D009036 1.9e-118 430.3 407 55.5
RcHm_v2.0_Chr7g0179381 Rosa chinensis HOM05D007058 ORTHO05D009036 3.2e-118 429.5 407 54.5
TWI60G0394 Tripterygium wilfordii HOM05D007058 ORTHO05D009036 5.4e-118 428.7 407 55.3
FAN13G1457 Fragaria x ananassa HOM05D007058 ORTHO05D009036 2.1e-117 426.8 404 55.0
Prupe.5G225300 Prunus persica HOM05D007058 ORTHO05D009036 7.9e-117 424.9 407 55.8
Solyc03g118860.3 Solanum lycopersicum HOM05D007058 ORTHO05D009036 1.0e-116 424.5 403 56.3
Sopen03g037810 Solanum pennellii HOM05D007058 ORTHO05D009036 1.0e-116 424.5 402 56.2
PGSC0003DMG400005667 Solanum tuberosum HOM05D007058 ORTHO05D009036 3.0e-116 422.9 403 56.8
Cc04_g06820 Coffea canephora HOM05D007058 ORTHO05D009036 8.7e-116 421.4 415 54.0
MELO3C002112.2 Cucumis melo HOM05D007058 ORTHO05D009036 7.4e-115 418.3 408 55.9
MD06G1220900 Malus domestica HOM05D007058 ORTHO05D009036 1.6e-114 417.2 408 54.4
CAN.G1129.46 Capsicum annuum HOM05D007058 ORTHO05D009036 2.8e-114 416.4 409 55.0
Hund02350 Selenicereus undatus HOM05D007058 ORTHO05D009036 4.8e-114 415.6 410 54.4
CsaV3_1G006960 Cucumis sativus L. HOM05D007058 ORTHO05D009036 6.2e-114 415.2 408 55.4
AUR62033787 Chenopodium quinoa HOM05D007058 ORTHO05D009036 2.4e-113 413.3 407 52.1
Potri.012G053600 Populus trichocarpa HOM05D007058 ORTHO05D009036 3.1e-113 412.9 404 54.0
Sabra12G0037400 Salix brachista HOM05D007058 ORTHO05D009036 6.9e-113 411.8 395 54.2
CANSAT80G0903 Cannabis sativa HOM05D007058 ORTHO05D009036 7.6e-112 408.3 385 55.1
arahy.Tifrunner.gnm1.ann1.8NC01M Arachis hypogaea HOM05D007058 ORTHO05D009036 9.9e-112 407.9 404 54.0
ClCG04G010870 Citrullus lanatus HOM05D007058 ORTHO05D009036 1.7e-111 407.1 408 54.2
arahy.Tifrunner.gnm1.ann1.LC4GJT Arachis hypogaea HOM05D007058 ORTHO05D009036 3.8e-111 406.0 381 55.9
THA.LOC104813907 Tarenaya hassleriana HOM05D007058 ORTHO05D009036 4.6e-109 399.1 399 54.4
Sed0017039 Sechium edule HOM05D007058 ORTHO05D009036 1.0e-108 397.9 380 55.5
MD14G1230300 Malus domestica HOM05D007058 ORTHO05D009036 1.3e-108 397.5 405 53.3
Mapoly0014s0012 Marchantia polymorpha HOM05D007058 ORTHO05D009036 1.5e-107 394.0 388 52.8
Migut.I00419 Erythranthe guttata HOM05D007058 ORTHO05D009036 9.0e-105 384.8 403 53.1
SMO271G0182 Selaginella moellendorffii HOM05D007058 ORTHO05D009036 2.2e-103 380.2 381 51.2
HPP92_027335 Vanilla planifolia HOM05D007058 ORTHO05D009036 5.5e-102 375.6 382 51.8
CARHR066810 Cardamine hirsuta HOM05D007058 ORTHO05D009036 7.1e-102 375.2 415 50.4
Eucgr.K02237 Eucalyptus grandis HOM05D007058 ORTHO05D009036 2.1e-101 373.6 346 55.8
HPP92_017197 Vanilla planifolia HOM05D007058 ORTHO05D009036 2.1e-101 373.6 382 51.6
A07p39600 Brassica napus HOM05D007058 ORTHO05D009036 6.1e-101 372.1 387 52.2
BraA07t31509Z Brassica rapa HOM05D007058 ORTHO05D009036 7.9e-101 371.7 387 51.9
Thhalv10018574m.g Eutrema salsugineum HOM05D007058 ORTHO05D009036 7.9e-101 371.7 404 50.7
Haze_18744 Corylus avellana HOM05D007058 ORTHO05D009036 3.0e-100 369.8 402 50.7
Lj4g0007182 Lotus japonicus HOM05D007058 ORTHO05D009036 5.1e-100 369.0 398 52.8
C06p47890 Brassica napus HOM05D007058 ORTHO05D009036 8.7e-100 368.2 397 51.1
BolC6t39824H Brassica oleracea HOM05D007058 ORTHO05D009036 8.7e-100 368.2 397 51.1
BcaB03g15080 Brassica carinata HOM05D007058 ORTHO05D009036 9.7e-99 364.8 400 51.0
Carub.0002s2049 Capsella rubella HOM05D007058 ORTHO05D009036 2.2e-98 363.6 381 51.4
Mapoly0014s0018 Marchantia polymorpha HOM05D007058 ORTHO05D009036 2.8e-98 363.2 354 53.4
Sp5g28930 Schrenkiella parvula HOM05D007058 ORTHO05D009036 6.3e-98 362.1 393 49.6
AL2G33550 Arabidopsis lyrata HOM05D007058 ORTHO05D009036 8.2e-98 361.7 380 51.8
AT1G73740 Arabidopsis thaliana HOM05D007058 ORTHO05D009036 6.9e-97 358.6 380 51.1
VMungo0251G0619 Vigna mungo HOM05D007058 ORTHO05D009036 1.2e-96 357.8 383 50.9
SMO308G0041 Selaginella moellendorffii HOM05D007058 ORTHO05D009036 2.0e-96 357.1 417 46.5
Oeu017513.1 Olea europaea HOM05D007058 ORTHO05D009036 2.6e-96 356.7 343 57.4
Aa31LG4G4070 Aethionema arabicum HOM05D007058 ORTHO05D009036 6.5e-95 352.1 389 49.4
Gorai.001G067900 Gossypium raimondii HOM05D007058 ORTHO05D009036 4.6e-93 345.9 323 55.7
Pp3c1_26880 Physcomitrium patens HOM05D007058 ORTHO05D009036 3.0e-92 343.2 367 49.3
AUR62029919 Chenopodium quinoa HOM05D007058 ORTHO05D009036 1.4e-86 324.3 344 49.7
Phvul.002G325300 Phaseolus vulgaris HOM05D007058 ORTHO05D009036 1.2e-85 321.2 352 49.7
AagrBONN_evm.TU.Sc2ySwM_228.2408 Anthoceros agrestis HOM05D007058 ORTHO05D009036 1.8e-81 307.4 303 52.5
Glyma.05G242000 Glycine max HOM05D007058 ORTHO05D009036 2.2e-74 283.9 310 50.0
FvH4_5g16720 Fragaria vesca HOM05D007058 ORTHO05D009036 3.1e-73 280.0 285 50.2
Rhsim08G0129700 Rhododendron simsii HOM05D007058 ORTHO05D009036 5.0e-71 272.7 259 56.0
CBR_g74658 Chara braunii HOM05D007058 ORTHO05D009036 8.8e-60 235.3 611 29.5
Os01g0516700 Oryza sativa ssp. japonica HOM05D007058 ORTHO05D009036 5.7e-59 232.6 301 45.8
MCO02G081 Micromonas commoda HOM05D007058 ORTHO05D009036 2.5e-54 217.2 413 34.4
Gohir.D07G064300 Gossypium hirsutum HOM05D007058 ORTHO05D009036 4.7e-53 213.0 213 51.6
PRCOL_00000956 Prasinoderma coloniale HOM05D007058 ORTHO05D009036 1.2e-51 208.4 390 36.4
Glyma.08G049500 Glycine max HOM05D007058 ORTHO05D009036 4.3e-38 163.3 202 45.5
Zm00001eb132130 Zea mays HOM05D007058 ORTHO05D009036 8.9e-36 155.6 244 39.8
Glyma.08G049450 Glycine max HOM05D007058 ORTHO05D009036 3.7e-34 150.2 116 63.8
CAN.G1074.8 Capsicum annuum HOM05D007058 ORTHO05D009036 1.6e-29 134.8 128 51.6
arahy.Tifrunner.gnm1.ann1.4SU3WD Arachis hypogaea HOM05D007058 ORTHO05D009036 1.1e-28 132.1 127 51.2
SalBow5G0499 Salvia bowleyana HOM05D007058 ORTHO05D010040 3.9e-23 113.6 119 56.3
SEGI_28231 Sequoiadendron giganteum HOM05D007058 ORTHO05D009036 3.3e-22 110.5 78 73.1
Cre12.g527950 Chlamydomonas reinhardtii HOM05D007058 ORTHO05D009036 6.8e-20 102.8 370 25.1
CAN.G169.6 Capsicum annuum HOM05D007058 ORTHO05D009036 2.0e-19 101.3 105 50.5
Gorai.001G067800 Gossypium raimondii HOM05D007058 ORTHO05D009036 2.2e-18 97.8 80 65.0
AUR62029918 Chenopodium quinoa HOM05D007058 ORTHO05D009036 2.9e-18 97.4 82 58.5
Ah.11g045170 Amaranthus hybridus HOM05D007058 ORTHO05D009036 8.7e-15 85.9 85 52.9
CAN.G507.4 Capsicum annuum HOM05D006747 ORTHO05D008384 1.5e-14 85.1 75 54.7
BcaC08g46795 Brassica carinata HOM05D007058 ORTHO05D009036 5.6e-14 83.2 97 48.5
Gohir.D07G064250 Gossypium hirsutum HOM05D007058 ORTHO05D009036 4.4e-11 73.6 61 65.6
Rhsim08G0129900 Rhododendron simsii HOM05D007058 ORTHO05D009036 1.9e-09 68.2 54 61.1
arahy.Tifrunner.gnm1.ann1.MMR300 Arachis hypogaea HOM05D007058 ORTHO05D009036 3.5e-08 63.9 66 50.0
Rhsim08G0129800 Rhododendron simsii HOM05D007058 ORTHO05D021411 2.3e-07 61.2 43 67.4


User provided reference genes

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