Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0681G287 Amborella trichopoda HOM05D007076 ORTHO05D008800 2.2e-131 472.2 231 100.0
GSVIVG01012872001 Vitis vinifera HOM05D007076 ORTHO05D008800 1.0e-88 330.5 214 72.0
TAR625G0498 Trochodendron aralioides HOM05D007076 ORTHO05D008800 1.6e-84 316.6 211 72.5
Nn1g00072 Nelumbo nucifera HOM05D007076 ORTHO05D008800 2.0e-84 316.2 216 69.9
FAN26G2288 Fragaria x ananassa HOM05D007076 ORTHO05D008800 3.5e-84 315.5 203 72.4
Prupe.7G256300 Prunus persica HOM05D007076 ORTHO05D008800 4.5e-84 315.1 222 69.4
MBI14_g03617_MAGBIO Magnolia biondii HOM05D007076 ORTHO05D008800 7.7e-84 314.3 250 64.4
RcHm_v2.0_Chr2g0086841 Rosa chinensis HOM05D007076 ORTHO05D008800 1.7e-83 313.2 198 72.7
Gohir.A05G012200 Gossypium hirsutum HOM05D007076 ORTHO05D008800 2.3e-83 312.8 226 68.1
FvH4_1g01870 Fragaria vesca HOM05D007076 ORTHO05D008800 3.8e-83 312.0 203 71.4
FAN19G3087 Fragaria x ananassa HOM05D007076 ORTHO05D008800 3.8e-83 312.0 203 71.4
Nn2g12218 Nelumbo nucifera HOM05D007076 ORTHO05D008800 3.8e-83 312.0 211 70.1
FAN23G1541 Fragaria x ananassa HOM05D007076 ORTHO05D008800 5.0e-83 311.6 198 72.2
Glyma.13G164900 Glycine max HOM05D007076 ORTHO05D008800 5.0e-83 311.6 197 72.1
Glyma.17G106200 Glycine max HOM05D007076 ORTHO05D008800 5.0e-83 311.6 224 65.6
Aqoxy7G02462 Aquilegia oxysepala HOM05D007076 ORTHO05D008800 6.5e-83 311.2 202 73.8
CiPaw.15G183500 Carya illinoinensis HOM05D007076 ORTHO05D008800 8.6e-83 310.8 229 66.8
Gorai.009G013300 Gossypium raimondii HOM05D007076 ORTHO05D008800 8.6e-83 310.8 226 67.7
CDE05G2705 Ceratophyllum demersum HOM05D007076 ORTHO05D008800 1.5e-82 310.1 217 70.5
MD15G1161100 Malus domestica HOM05D007076 ORTHO05D008800 1.9e-82 309.7 204 71.6
Ca_21630_v3 Cicer arietinum L. HOM05D007076 ORTHO05D008800 2.5e-82 309.3 203 70.0
Ca_30692_v3 Cicer arietinum L. HOM05D007076 ORTHO05D008800 2.5e-82 309.3 203 70.0
PSO170G2339 Papaver somniferum HOM05D007076 ORTHO05D008800 2.5e-82 309.3 221 69.2
Gohir.D05G013300 Gossypium hirsutum HOM05D007076 ORTHO05D008800 3.3e-82 308.9 226 67.7
Lalb_Chr07g0179431 Lupinus albus HOM05D007076 ORTHO05D008800 4.2e-82 308.5 222 65.3
Manes.14G120300 Manihot esculenta HOM05D007076 ORTHO05D008800 4.2e-82 308.5 198 69.2
VMungo1215G2969 Vigna mungo HOM05D007076 ORTHO05D008800 4.2e-82 308.5 206 68.9
Eucgr.C04107 Eucalyptus grandis HOM05D007076 ORTHO05D008800 5.5e-82 308.1 227 64.3
Duzib168G1701 Durio zibethinus HOM05D007076 ORTHO05D008800 9.5e-82 307.4 196 73.0
PGR142G4145 Punica granatum HOM05D007076 ORTHO05D008800 1.2e-81 307.0 222 68.0
CANSAT11G0571 Cannabis sativa HOM05D007076 ORTHO05D008800 1.6e-81 306.6 210 68.1
Lsat_1_v5_gn_7_46141 Lactuca sativa HOM05D007076 ORTHO05D008800 2.8e-81 305.8 203 69.0
QL02p091054 Quercus lobata HOM05D007076 ORTHO05D008800 3.6e-81 305.4 198 71.2
CAN.G728.2 Capsicum annuum HOM05D007076 ORTHO05D008800 4.7e-81 305.1 200 70.5
Lj4g0004831 Lotus japonicus HOM05D007076 ORTHO05D008800 4.7e-81 305.1 206 67.5
PSO017G3183 Papaver somniferum HOM05D007076 ORTHO05D008800 6.1e-81 304.7 222 68.9
Thecc.09G139600 Theobroma cacao HOM05D007076 ORTHO05D008800 8.0e-81 304.3 197 72.6
MSTRG.19622 Avicennia marina HOM05D007076 ORTHO05D008800 1.4e-80 303.5 199 70.9
Rhsim01G0051700 Rhododendron simsii HOM05D007076 ORTHO05D008800 1.4e-80 303.5 203 71.9
THA.LOC104817530 Tarenaya hassleriana HOM05D007076 ORTHO05D008800 1.4e-80 303.5 198 70.2
TWI34G1052 Tripterygium wilfordii HOM05D007076 ORTHO05D008800 1.4e-80 303.5 194 72.7
Os08g0167500 Oryza sativa ssp. japonica HOM05D007076 ORTHO05D008800 2.3e-80 302.8 204 74.0
Solyc07g007280.4 Solanum lycopersicum HOM05D007076 ORTHO05D008800 2.3e-80 302.8 217 67.7
Actinidia21919 Actinidia chinensis HOM05D007076 ORTHO05D008800 3.0e-80 302.4 201 69.7
vmacro21890 Vaccinium macrocarpon HOM05D007076 ORTHO05D008800 4.0e-80 302.0 218 65.6
Migut.J01262 Erythranthe guttata HOM05D007076 ORTHO05D008800 5.2e-80 301.6 195 71.8
Cfa020904 Carpinus fangiana HOM05D007076 ORTHO05D008800 8.9e-80 300.8 201 70.1
Potri.006G060100 Populus trichocarpa HOM05D007076 ORTHO05D008800 8.9e-80 300.8 197 71.1
ClCG06G011950 Citrullus lanatus HOM05D007076 ORTHO05D008800 1.2e-79 300.4 200 71.0
MELO3C010270.2 Cucumis melo HOM05D007076 ORTHO05D008800 1.2e-79 300.4 213 68.1
Sabra06G0043400 Salix brachista HOM05D000638 ORTHO05D000801 2.0e-79 299.7 197 71.1
Medtr4g116350 Medicago truncatula HOM05D007076 ORTHO05D008800 3.4e-79 298.9 197 68.0
Nitab4.5_0003305g0010 Nicotiana tabacum HOM05D007076 ORTHO05D008800 3.4e-79 298.9 196 70.9
A04p35120 Brassica napus HOM05D007076 ORTHO05D008800 7.5e-79 297.7 195 70.3
BraA04t18948Z Brassica rapa HOM05D007076 ORTHO05D008800 7.5e-79 297.7 195 70.3
BcaC02g06997 Brassica carinata HOM05D007076 ORTHO05D008800 9.8e-79 297.4 195 69.7
Thhalv10001598m.g Eutrema salsugineum HOM05D007076 ORTHO05D008800 1.3e-78 297.0 200 69.0
COL.COLO4_24128 Corchorus olitorius HOM05D007076 ORTHO05D008800 1.7e-78 296.6 204 68.6
BolC4t28783H Brassica oleracea HOM05D007076 ORTHO05D008800 2.2e-78 296.2 196 69.9
CsaV3_1G028410 Cucumis sativus L. HOM05D007076 ORTHO05D008800 2.2e-78 296.2 213 67.6
Peaxi162Scf00088g00017 Petunia axillaris HOM05D007076 ORTHO05D008800 2.2e-78 296.2 206 70.9
Oeu058595.1 Olea europaea HOM05D007076 ORTHO05D008800 2.8e-78 295.8 195 70.8
Sed0007180 Sechium edule HOM05D007076 ORTHO05D008800 6.3e-78 294.7 223 64.1
Sopen07g003340 Solanum pennellii HOM05D007076 ORTHO05D008800 6.3e-78 294.7 201 69.7
Nitab4.5_0008829g0010 Nicotiana tabacum HOM05D007076 ORTHO05D008800 8.3e-78 294.3 195 70.3
Aa31LG1G29340 Aethionema arabicum HOM05D007076 ORTHO05D008800 1.1e-77 293.9 197 68.0
BcaB06g29501 Brassica carinata HOM05D007076 ORTHO05D008800 2.4e-77 292.7 193 69.4
PGSC0003DMG400030692 Solanum tuberosum HOM05D007076 ORTHO05D008800 2.4e-77 292.7 201 69.2
AL4G47500 Arabidopsis lyrata HOM05D007076 ORTHO05D008800 7.0e-77 291.2 195 71.3
CARHR143300 Cardamine hirsuta HOM05D007076 ORTHO05D008800 9.2e-77 290.8 195 69.2
HanXRQChr09g0243091 Helianthus annuus HOM05D007076 ORTHO05D008800 1.6e-76 290.0 212 64.2
Psat7g049360 Pisum sativum HOM05D007076 ORTHO05D008800 2.7e-76 289.3 198 67.2
SalBow1G5229 Salvia bowleyana HOM05D007076 ORTHO05D008800 4.5e-76 288.5 196 67.9
TPR.G15804 Trifolium pratense HOM05D007076 ORTHO05D008800 4.5e-76 288.5 223 63.2
Carub.0004s3063 Capsella rubella HOM05D007076 ORTHO05D008800 7.8e-76 287.7 196 68.9
Sp4g29830 Schrenkiella parvula HOM05D007076 ORTHO05D008800 7.8e-76 287.7 201 65.7
DCAR_017767 Daucus carota HOM05D007076 ORTHO05D008800 1.0e-75 287.3 198 67.7
Ciclev10009248m.g Citrus clementina HOM05D007076 ORTHO05D008800 1.7e-75 286.6 195 66.7
Cc06_g07520 Coffea canephora HOM05D007076 ORTHO05D008800 1.7e-75 286.6 239 60.3
Phvul.003G173400 Phaseolus vulgaris HOM05D007076 ORTHO05D008800 3.8e-75 285.4 178 71.9
Atru.chr7.279 Acer truncatum HOM05D007076 ORTHO05D008800 1.5e-74 283.5 183 69.4
Cpa.g.sc46.76 Carica papaya HOM05D007076 ORTHO05D008800 1.5e-74 283.5 199 66.8
FAN28G0280 Fragaria x ananassa HOM05D007076 ORTHO05D008800 2.8e-73 279.3 198 66.7
Zm00001eb172070 Zea mays HOM05D007076 ORTHO05D008800 8.0e-73 277.7 230 61.3
ECA240G2388 Erigeron canadensis HOM05D007076 ORTHO05D008800 1.0e-72 277.3 172 72.1
AT2G47910 Arabidopsis thaliana HOM05D007076 ORTHO05D008800 3.0e-72 275.8 180 70.6
arahy.Tifrunner.gnm1.ann1.W7VCER Arachis hypogaea HOM05D007076 ORTHO05D008800 3.0e-72 275.8 208 63.0
Lj9A706G31 Lonicera japonica HOM05D007076 ORTHO05D008800 4.0e-72 275.4 182 69.8
Dinv41435 Davidia involucrata HOM05D007076 ORTHO05D008800 5.2e-72 275.0 217 61.3
Atru.BG.23.p Acer truncatum HOM05D007076 ORTHO05D008800 1.2e-71 273.9 175 70.9
AUR62041461 Chenopodium quinoa HOM05D007076 ORTHO05D008800 1.2e-71 273.9 204 64.7
EL10Ac8g18804 Beta vulgaris HOM05D007076 ORTHO05D008800 3.4e-71 272.3 201 65.7
Ah.00g000030 Amaranthus hybridus HOM05D007076 ORTHO05D008800 4.4e-71 271.9 238 58.8
C04p73020 Brassica napus HOM05D007076 ORTHO05D008800 2.2e-70 269.6 167 73.7
Haze_19333 Corylus avellana HOM05D007076 ORTHO05D008800 1.2e-68 263.8 202 62.4
Duzib187G0567 Durio zibethinus HOM05D007076 ORTHO05D008800 8.0e-65 251.1 168 69.6
arahy.Tifrunner.gnm1.ann1.80N34X Arachis hypogaea HOM05D007076 ORTHO05D008800 1.7e-62 243.4 207 58.5
SMO119G0333 Selaginella moellendorffii HOM05D007076 ORTHO05D008800 9.2e-61 237.7 173 63.0
unitig_37.g12628 Utricularia gibba HOM05D007076 ORTHO05D008800 1.2e-60 237.3 210 54.3
Nn3g21909 Nelumbo nucifera HOM05D007076 ORTHO05D008800 2.1e-60 236.5 179 65.9
Nn1g04045 Nelumbo nucifera HOM05D007076 ORTHO05D008800 3.9e-59 232.3 138 79.7
AUR62011242 Chenopodium quinoa HOM05D007076 ORTHO05D008800 1.4e-56 223.8 202 57.4
Mapoly0095s0056 Marchantia polymorpha HOM05D007076 ORTHO05D008800 5.8e-55 218.4 199 53.8
Pp3c22_2510 Physcomitrium patens HOM05D007076 ORTHO05D008800 2.9e-54 216.1 200 51.5
AagrBONN_evm.TU.Sc2ySwM_362.135 Anthoceros agrestis HOM05D007076 ORTHO05D008800 9.3e-37 157.9 148 51.4
Migut.J01256 Erythranthe guttata HOM05D007076 ORTHO05D008800 5.1e-35 152.1 124 61.3
Nn1g02289 Nelumbo nucifera HOM05D007076 ORTHO05D008800 1.6e-25 120.6 75 76.0
CSS0010696 Camellia sinensis var. sinensis HOM05D007076 ORTHO05D008800 1.1e-24 117.9 65 78.5
CSS0049676 Camellia sinensis var. sinensis HOM05D007076 ORTHO05D008800 2.9e-22 109.8 61 77.0
MD02G1016600 Malus domestica HOM05D007076 ORTHO05D008800 3.9e-19 99.4 216 33.8
Nn1g02288 Nelumbo nucifera HOM05D007076 ORTHO05D008800 1.1e-18 97.8 80 55.0
Oeu028011.1 Olea europaea HOM05D007076 ORTHO05D008800 7.4e-18 95.1 61 70.5
CBR_g8382 Chara braunii HOM05D007076 ORTHO05D008800 7.4e-10 68.6 73 43.8


User provided reference genes

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