Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0681G284 Amborella trichopoda HOM05D003877 ORTHO05D038325 3.4e-42 174.5 81 100.0
ATR0068G102 Amborella trichopoda HOM05D003877 ORTHO05D004647 5.2e-27 124.0 71 78.9
CDE04G1002 Ceratophyllum demersum HOM05D003877 ORTHO05D004647 1.2e-12 76.3 86 41.9
SEGI_18884 Sequoiadendron giganteum HOM05D003877 ORTHO05D038325 8.1e-12 73.6 72 45.8
Aqoxy2G01450 Aquilegia oxysepala HOM05D003877 ORTHO05D004647 4.0e-11 71.2 81 34.6
Aqoxy1G01313 Aquilegia oxysepala HOM05D003877 ORTHO05D004647 6.8e-11 70.5 79 34.2
Nn7g35848 Nelumbo nucifera HOM05D003877 ORTHO05D004647 2.0e-10 68.9 83 38.6
CDE06G2086 Ceratophyllum demersum HOM05D003877 ORTHO05D004647 2.6e-10 68.6 86 36.0
CSS0004354 Camellia sinensis var. sinensis HOM05D003877 ORTHO05D004647 7.5e-10 67.0 71 42.3
Dinv10589 Davidia involucrata HOM05D003877 ORTHO05D004647 9.9e-10 66.6 60 41.7
TAR623G0028 Trochodendron aralioides HOM05D003877 ORTHO05D004647 9.9e-10 66.6 85 37.6
Actinidia29719 Actinidia chinensis HOM05D003877 ORTHO05D004647 2.9e-09 65.1 55 47.3
CSS0042673 Camellia sinensis var. sinensis HOM05D003877 ORTHO05D004647 3.7e-09 64.7 71 40.8
Lsat_1_v5_gn_9_123441 Lactuca sativa HOM05D003877 ORTHO05D004647 3.7e-09 64.7 71 38.0
Nitab4.5_0000058g0130 Nicotiana tabacum HOM05D003877 ORTHO05D004647 3.7e-09 64.7 71 39.4
vmacro17690 Vaccinium macrocarpon HOM05D003877 ORTHO05D004647 4.9e-09 64.3 50 48.0
Zm00001eb062330 Zea mays HOM05D003877 ORTHO05D004647 4.9e-09 64.3 70 41.4
Os03g0818100 Oryza sativa ssp. japonica HOM05D003877 ORTHO05D004647 8.3e-09 63.5 72 43.1
CSS0043221 Camellia sinensis var. sinensis HOM05D003877 ORTHO05D004647 1.1e-08 63.2 60 41.7
Sabra10G0141800 Salix brachista HOM05D003877 ORTHO05D004647 1.1e-08 63.2 66 37.9
Nitab4.5_0005049g0030 Nicotiana tabacum HOM05D003877 ORTHO05D004647 1.9e-08 62.4 57 42.1
vmacro10004 Vaccinium macrocarpon HOM05D003877 ORTHO05D004647 3.2e-08 61.6 70 40.0
RcHm_v2.0_Chr1g0370931 Rosa chinensis HOM05D003877 ORTHO05D004647 4.1e-08 61.2 64 42.2
Peaxi162Scf01149g00319 Petunia axillaris HOM05D003877 ORTHO05D004647 5.4e-08 60.8 60 41.7
Rhsim03G0146600 Rhododendron simsii HOM05D003877 ORTHO05D004647 7.1e-08 60.5 46 45.7
Cc02_g06060 Coffea canephora HOM05D003877 ORTHO05D004647 9.2e-08 60.1 38 55.3
MD01G1157500 Malus domestica HOM05D003877 ORTHO05D004647 1.2e-07 59.7 62 41.9
Potri.008G072600 Populus trichocarpa HOM05D003877 ORTHO05D004647 1.2e-07 59.7 60 41.7
Potri.010G184600 Populus trichocarpa HOM05D003877 ORTHO05D004647 1.6e-07 59.3 60 40.0
CSS0044757 Camellia sinensis var. sinensis HOM05D003877 ORTHO05D004647 2.1e-07 58.9 38 55.3
Lj6g0018000 Lotus japonicus HOM05D003877 ORTHO05D004647 2.1e-07 58.9 64 42.2
DCAR_011841 Daucus carota HOM05D003877 ORTHO05D004647 2.7e-07 58.5 62 43.5
Gorai.012G079000 Gossypium raimondii HOM05D003877 ORTHO05D004647 2.7e-07 58.5 71 38.0
Nitab4.5_0003391g0120 Nicotiana tabacum HOM05D003877 ORTHO05D004647 2.7e-07 58.5 51 45.1
PSO339G0345 Papaver somniferum HOM05D003877 ORTHO05D004647 2.7e-07 58.5 53 39.6
TAR633G0464 Trochodendron aralioides HOM05D003877 ORTHO05D004647 2.7e-07 58.5 35 54.3
Manes.10G009000 Manihot esculenta HOM05D003877 ORTHO05D004647 4.6e-07 57.8 71 39.4
PGR142G4288 Punica granatum HOM05D003877 ORTHO05D004647 4.6e-07 57.8 62 40.3
vmacro17691 Vaccinium macrocarpon HOM05D003877 ORTHO05D004647 4.6e-07 57.8 45 46.7
GSVIVG01032758001 Vitis vinifera HOM05D003877 ORTHO05D004647 4.6e-07 57.8 38 50.0
Glyma.05G080100 Glycine max HOM05D003877 ORTHO05D004647 6.0e-07 57.4 63 39.7
PSO801G0566 Papaver somniferum HOM05D003877 ORTHO05D004647 6.0e-07 57.4 53 41.5
HanXRQChr08g0221971 Helianthus annuus HOM05D003877 ORTHO05D004647 7.8e-07 57.0 72 40.3
Eucgr.G03086 Eucalyptus grandis HOM05D003877 ORTHO05D004647 1.0e-06 56.6 45 46.7
Gohir.D06G167400 Gossypium hirsutum HOM05D003877 ORTHO05D004647 1.0e-06 56.6 64 32.8
Gorai.010G195300 Gossypium raimondii HOM05D003877 ORTHO05D004647 1.0e-06 56.6 64 32.8
Oeu056656.1 Olea europaea HOM05D003877 ORTHO05D004647 1.0e-06 56.6 67 35.8
GSVIVG01032757001 Vitis vinifera HOM05D003877 ORTHO05D004647 1.0e-06 56.6 71 35.2
Psat5g130920 Pisum sativum HOM05D003877 ORTHO05D004647 1.3e-06 56.2 53 39.6
Nitab4.5_0000789g0120 Nicotiana tabacum HOM05D003877 ORTHO05D004647 1.7e-06 55.8 38 50.0
Sed0008918 Sechium edule HOM05D003877 ORTHO05D004647 1.7e-06 55.8 64 43.8
TWI73G0349 Tripterygium wilfordii HOM05D003877 ORTHO05D004647 1.7e-06 55.8 53 41.5
Gohir.A06G161800 Gossypium hirsutum HOM05D003877 ORTHO05D004647 2.3e-06 55.5 64 32.8
Lj1C785G15 Lonicera japonica HOM05D003877 ORTHO05D004647 2.3e-06 55.5 32 56.2
SGA_v2.0_scaffold2G01375 Striga asiatica HOM05D003877 ORTHO05D004647 2.3e-06 55.5 48 43.8
unitig_16.g32857 Utricularia gibba HOM05D003877 ORTHO05D004647 2.3e-06 55.5 32 56.2
unitig_8.g4098 Utricularia gibba HOM05D003877 ORTHO05D004647 2.3e-06 55.5 32 56.2
HPP92_019712 Vanilla planifolia HOM05D003877 ORTHO05D004647 2.3e-06 55.5 74 37.8
Ca_15152_v3 Cicer arietinum L. HOM05D003877 ORTHO05D004647 3.0e-06 55.1 64 42.2
Migut.F00639 Erythranthe guttata HOM05D003877 ORTHO05D004647 3.0e-06 55.1 66 36.4
Medtr3g071580 Medicago truncatula HOM05D003877 ORTHO05D004647 3.0e-06 55.1 59 39.0
SGA_v2.0_scaffold60G20966 Striga asiatica HOM05D003877 ORTHO05D004647 3.0e-06 55.1 66 33.3
TWI09G1304 Tripterygium wilfordii HOM05D003877 ORTHO05D004647 3.0e-06 55.1 35 51.4
FAN03G0426 Fragaria x ananassa HOM05D003877 ORTHO05D004647 3.9e-06 54.7 64 42.2
Peaxi162Scf00284g00528 Petunia axillaris HOM05D003877 ORTHO05D004647 3.9e-06 54.7 36 47.2
Ah.10g036260 Amaranthus hybridus HOM05D003877 ORTHO05D004647 5.1e-06 54.3 33 51.5
EL10Ac2g04887 Beta vulgaris HOM05D003877 ORTHO05D004647 5.1e-06 54.3 41 39.0
CAN.G1268.9 Capsicum annuum HOM05D003877 ORTHO05D004647 5.1e-06 54.3 50 42.0
FAN01G0819 Fragaria x ananassa HOM05D003877 ORTHO05D004647 5.1e-06 54.3 50 46.0
FAN10G2809 Fragaria x ananassa HOM05D003877 ORTHO05D004647 5.1e-06 54.3 50 46.0
Thecc.10G011300 Theobroma cacao HOM05D003877 ORTHO05D004647 5.1e-06 54.3 35 48.6
Ciclev10031326m.g Citrus clementina HOM05D003877 ORTHO05D004647 6.6e-06 53.9 35 51.4
THA.LOC104810121 Tarenaya hassleriana HOM05D003877 ORTHO05D004647 6.6e-06 53.9 33 51.5
CsaV3_5G010390 Cucumis sativus L. HOM05D003877 ORTHO05D004647 8.6e-06 53.5 35 54.3
FvH4_7g25060 Fragaria vesca HOM05D003877 ORTHO05D004647 8.6e-06 53.5 33 60.6
FAN06G1542 Fragaria x ananassa HOM05D003877 ORTHO05D004647 8.6e-06 53.5 33 60.6
Gohir.A05G331800 Gossypium hirsutum HOM05D003877 ORTHO05D004647 8.6e-06 53.5 35 48.6
Sopen05g031010 Solanum pennellii HOM05D003877 ORTHO05D004647 8.6e-06 53.5 60 35.0
VMungo0540G0037 Vigna mungo HOM05D003877 ORTHO05D004647 8.6e-06 53.5 35 51.4


User provided reference genes

Program Settings