Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0681G260 Amborella trichopoda HOM05D000283 ORTHO05D006673 0.0e+00 2747.2 1426 100.0
MBI04_g35056_MAGBIO Magnolia biondii HOM05D006627 ORTHO05D007753 4.5e-73 281.2 1537 26.5
TAR633G0056 Trochodendron aralioides HOM05D000283 ORTHO05D006673 9.7e-60 236.9 826 33.3
Dinv25941 Davidia involucrata HOM05D000283 ORTHO05D004861 9.1e-58 230.3 1470 27.3
CSS0040218 Camellia sinensis var. sinensis HOM05D000283 ORTHO05D006673 2.3e-53 215.7 1491 26.9
CSS0006513 Camellia sinensis var. sinensis HOM05D000283 ORTHO05D006673 5.2e-53 214.5 1491 27.0
Nn1g01607 Nelumbo nucifera HOM05D006627 ORTHO05D007753 2.6e-52 212.2 1543 26.0
TAR629G2332 Trochodendron aralioides HOM05D006627 ORTHO05D007753 7.4e-52 210.7 953 28.8
TAR636G0162 Trochodendron aralioides HOM05D000283 ORTHO05D006673 3.7e-51 208.4 1211 27.4
Cfa001559 Carpinus fangiana HOM05D000283 ORTHO05D005391 1.1e-50 206.8 1169 28.3
QL08p057512 Quercus lobata HOM05D000283 ORTHO05D006673 7.2e-47 194.1 1455 26.8
CiPaw.02G178500 Carya illinoinensis HOM05D000283 ORTHO05D006673 2.1e-46 192.6 1209 27.2
PSO478G1013 Papaver somniferum HOM05D006627 ORTHO05D007753 6.1e-46 191.0 516 33.3
Nn1g01606 Nelumbo nucifera HOM05D006627 ORTHO05D007753 6.7e-45 187.6 1515 25.7
PSO782G1175 Papaver somniferum HOM05D006627 ORTHO05D007753 8.8e-45 187.2 516 33.1
TAR375G0196 Trochodendron aralioides HOM05D006627 ORTHO05D007753 3.3e-44 185.3 1536 23.9
ATR0661G323 Amborella trichopoda HOM05D006627 ORTHO05D007753 5.0e-40 171.4 721 31.6
CiPaw.01G279600 Carya illinoinensis HOM05D000283 ORTHO05D006673 8.5e-40 170.6 1244 27.3
Aqoxy2G01934 Aquilegia oxysepala HOM05D000283 ORTHO05D006673 4.2e-39 168.3 1485 25.3
TAR374G1318 Trochodendron aralioides HOM05D006627 ORTHO05D007753 5.5e-39 167.9 1208 25.0
Duzib114G0075 Durio zibethinus HOM05D000283 ORTHO05D006673 1.2e-38 166.8 1212 26.1
Gorai.012G066900 Gossypium raimondii HOM05D000283 ORTHO05D006673 2.1e-38 166.0 840 28.9
Prupe.2G224500 Prunus persica HOM05D000283 ORTHO05D006673 5.2e-37 161.4 1480 24.9
COL.COLO4_29238 Corchorus olitorius HOM05D000283 ORTHO05D006673 2.6e-36 159.1 1144 25.9
Nn2g11490 Nelumbo nucifera HOM05D000283 ORTHO05D006673 8.3e-35 154.1 1221 28.5
Ciclev10033332m.g Citrus clementina HOM05D000283 ORTHO05D006673 1.1e-34 153.7 1467 25.6
Gohir.A05G352800 Gossypium hirsutum HOM05D000283 ORTHO05D006673 5.4e-34 151.4 834 28.9
Atru.chr12.593 Acer truncatum HOM05D000283 ORTHO05D006673 1.6e-33 149.8 836 27.9
Glyma.10G292400 Glycine max HOM05D000283 ORTHO05D006673 5.9e-33 147.9 1214 25.9
CDE07G1705 Ceratophyllum demersum HOM05D000283 ORTHO05D006673 7.7e-33 147.5 1438 25.1
Manes.10G039300 Manihot esculenta HOM05D000283 ORTHO05D006673 7.7e-33 147.5 1432 24.8
Lj8A92T85 Lonicera japonica HOM05D000283 ORTHO05D006673 3.8e-32 145.2 1258 26.2
Gohir.D04G060201 Gossypium hirsutum HOM05D000283 ORTHO05D006673 1.1e-31 143.7 852 28.9
Glyma.20G242400 Glycine max HOM05D000283 ORTHO05D006673 1.5e-31 143.3 1333 25.1
arahy.Tifrunner.gnm1.ann1.SA4FWZ Arachis hypogaea HOM05D000283 ORTHO05D006673 7.2e-31 141.0 1532 23.8
arahy.Tifrunner.gnm1.ann1.U4C8JV Arachis hypogaea HOM05D000283 ORTHO05D006673 1.6e-30 139.8 1535 23.8
Thecc.10G063100 Theobroma cacao HOM05D000283 ORTHO05D006673 2.1e-30 139.4 677 28.8
RcHm_v2.0_Chr1g0365001 Rosa chinensis HOM05D000283 ORTHO05D006673 1.4e-29 136.7 1480 25.3
SalBow6G2235 Salvia bowleyana HOM05D000283 ORTHO05D006673 1.8e-29 136.3 724 27.9
Rhsim09G0155800 Rhododendron simsii HOM05D000283 ORTHO05D006673 5.2e-29 134.8 1486 24.6
FAN10G3387 Fragaria x ananassa HOM05D000283 ORTHO05D005391 6.8e-29 134.4 1442 23.8
Peaxi162Scf00135g00027 Petunia axillaris HOM05D000283 ORTHO05D006673 2.2e-27 129.4 1174 25.6
Cpa.g.sc1.302 Carica papaya HOM05D000283 ORTHO05D006673 4.9e-27 128.3 302 35.8
Ca_11324_v3 Cicer arietinum L. HOM05D000283 ORTHO05D006673 4.9e-27 128.3 846 29.2
MD01G1117200 Malus domestica HOM05D000283 ORTHO05D006673 8.3e-27 127.5 1205 25.9
VMungo0720G0439 Vigna mungo HOM05D000283 ORTHO05D006673 1.8e-26 126.3 980 26.5
Manes.10G039200 Manihot esculenta HOM05D000283 ORTHO05D006673 4.1e-26 125.2 1226 25.3
Duzib106G1116 Durio zibethinus HOM05D000283 ORTHO05D006673 7.0e-26 124.4 816 28.3
FvH4_7g20760 Fragaria vesca HOM05D000283 ORTHO05D006673 7.0e-26 124.4 1469 24.2
Hma1.2p1_0348F.1_g131680 Hydrangea macrophylla HOM05D000283 ORTHO05D006673 7.0e-26 124.4 1467 23.7
MD07G1184600 Malus domestica HOM05D000283 ORTHO05D006673 1.6e-25 123.2 1171 25.0
Medtr1g115950 Medicago truncatula HOM05D000283 ORTHO05D006673 1.6e-25 123.2 1489 24.6
Lj5g0015824 Lotus japonicus HOM05D000283 ORTHO05D006673 2.3e-24 119.4 998 26.9
FAN06G0550 Fragaria x ananassa HOM05D000283 ORTHO05D006673 3.8e-24 118.6 1470 24.8
FAN03G1488 Fragaria x ananassa HOM05D000283 ORTHO05D006673 5.0e-24 118.2 1476 24.3
Cc02_g08660 Coffea canephora HOM05D000283 ORTHO05D006673 8.6e-24 117.5 1136 25.8
Sabra10G0165500 Salix brachista HOM05D000283 ORTHO05D006673 1.1e-23 117.1 837 27.8
Psat6g238520 Pisum sativum HOM05D000283 ORTHO05D006673 1.5e-23 116.7 1232 25.8
FAN06G2682 Fragaria x ananassa HOM05D000283 ORTHO05D006673 4.3e-23 115.2 1470 24.4
Sabra08G0033700 Salix brachista HOM05D000283 ORTHO05D006673 5.6e-23 114.8 878 27.0
ClCG09G020310 Citrullus lanatus HOM05D000283 ORTHO05D006673 7.3e-23 114.4 933 26.2
TPR.G10427 Trifolium pratense HOM05D000283 ORTHO05D006673 9.5e-23 114.0 1525 24.7
Potri.010G213800 Populus trichocarpa HOM05D000283 ORTHO05D006673 3.6e-22 112.1 1476 24.5
Phvul.007G007900 Phaseolus vulgaris HOM05D000283 ORTHO05D006673 4.7e-22 111.7 1461 24.3
PSO478G2008 Papaver somniferum HOM05D000283 ORTHO05D006673 6.1e-22 111.3 594 28.5
Actinidia28362 Actinidia chinensis HOM05D006627 ORTHO05D007753 4.0e-21 108.6 472 29.0
Eucgr.G02778 Eucalyptus grandis HOM05D000283 ORTHO05D006673 4.0e-21 108.6 1502 24.2
Potri.008G047600 Populus trichocarpa HOM05D000283 ORTHO05D006673 2.6e-20 105.9 1486 23.4
Lalb_Chr02g0143851 Lupinus albus HOM05D000283 ORTHO05D006673 5.7e-20 104.8 1247 25.3
PSO782G0271 Papaver somniferum HOM05D000283 ORTHO05D006673 1.3e-19 103.6 777 26.8
TWI38G0559 Tripterygium wilfordii HOM05D000283 ORTHO05D006673 2.9e-19 102.4 1415 23.8
GSVIVG01028875001 Vitis vinifera HOM05D006627 ORTHO05D007753 3.7e-19 102.1 1067 23.7
Os08g0430000 Oryza sativa ssp. japonica HOM05D006627 ORTHO05D007753 1.1e-18 100.5 463 28.5
Dinv38916 Davidia involucrata HOM05D006627 ORTHO05D007753 3.2e-18 99.0 1160 22.5
Haze_00034 Corylus avellana HOM05D006627 ORTHO05D007753 1.2e-17 97.1 421 27.3
Migut.F00680 Erythranthe guttata HOM05D000283 ORTHO05D006673 1.2e-17 97.1 837 25.9
Lalb_Chr02g0143831 Lupinus albus HOM05D000283 ORTHO05D006673 2.3e-16 92.8 720 27.9
Cfa012198 Carpinus fangiana HOM05D006627 ORTHO05D007753 1.1e-15 90.5 1465 22.6
CDE04G2023 Ceratophyllum demersum HOM05D000283 ORTHO05D006673 1.1e-15 90.5 1426 23.6
Dinv37613 Davidia involucrata HOM05D006627 ORTHO05D007753 1.1e-15 90.5 239 33.1
GSVIVG01019397001 Vitis vinifera HOM05D006627 ORTHO05D007753 1.1e-15 90.5 1328 23.1
Nitab4.5_0006737g0060 Nicotiana tabacum HOM05D000283 ORTHO05D006673 1.9e-15 89.7 1178 24.4
HPP92_025630 Vanilla planifolia HOM05D006627 ORTHO05D007753 2.1e-14 86.3 362 28.2
CANSAT56G3782 Cannabis sativa HOM05D000283 ORTHO05D006673 2.8e-14 85.9 1506 22.8
HPP92_028535 Vanilla planifolia HOM05D061474 ORTHO05D007753 3.6e-14 85.5 320 32.2
MSTRG.27328 Avicennia marina HOM05D000283 ORTHO05D006673 4.7e-14 85.1 1464 24.0
EL10Ac5g12809 Beta vulgaris HOM05D006627 ORTHO05D007753 4.7e-14 85.1 358 28.2
Nitab4.5_0007221g0010 Nicotiana tabacum HOM05D000283 ORTHO05D006673 1.0e-13 84.0 1169 23.8
Oeu025162.3 Olea europaea HOM05D000283 ORTHO05D006673 1.0e-13 84.0 335 29.3
EL10Ac5g12810 Beta vulgaris HOM05D006627 ORTHO05D007753 1.4e-13 83.6 363 27.5
AUR62027265 Chenopodium quinoa HOM05D006627 ORTHO05D007753 1.8e-13 83.2 332 28.6
HPP92_028524 Vanilla planifolia HOM05D061474 ORTHO05D007753 2.0e-12 79.7 432 28.5
Haze_08819 Corylus avellana HOM05D006627 ORTHO05D007753 2.2e-11 76.3 1482 22.7
Hund11448 Selenicereus undatus HOM05D006627 ORTHO05D007753 2.2e-11 76.3 328 28.4
GSVIVG01032629001 Vitis vinifera HOM05D000283 ORTHO05D006673 2.9e-11 75.9 332 31.6
Ah.07g196520 Amaranthus hybridus HOM05D006627 ORTHO05D007753 4.9e-11 75.1 281 32.0
AUR62010719 Chenopodium quinoa HOM05D006627 ORTHO05D007753 1.1e-10 73.9 732 25.3
Zm00001eb179470 Zea mays HOM05D006627 ORTHO05D007753 1.1e-10 73.9 446 25.8
QL12p032277 Quercus lobata HOM05D006627 ORTHO05D007753 2.0e-09 69.7 1486 22.3
AUR62027266 Chenopodium quinoa HOM05D006627 ORTHO05D007753 2.7e-09 69.3 344 28.2
ClCG09G020330 Citrullus lanatus HOM05D000283 ORTHO05D006673 3.0e-08 65.9 625 26.4
Lsat_1_v5_gn_6_5180 Lactuca sativa HOM05D006627 ORTHO05D007753 6.2e-06 58.2 546 26.4


User provided reference genes

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