Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0681G254 Amborella trichopoda HOM05D007292 ORTHO05D009084 8.7e-114 413.7 214 100.0
TAR633G2478 Trochodendron aralioides HOM05D007292 ORTHO05D009084 9.2e-47 191.0 207 54.1
Dinv10605 Davidia involucrata HOM05D007292 ORTHO05D009084 7.7e-46 188.0 208 53.8
Duzib114G0074 Durio zibethinus HOM05D007292 ORTHO05D009084 1.0e-45 187.6 209 52.6
Thecc.10G013900 Theobroma cacao HOM05D007292 ORTHO05D009084 1.0e-45 187.6 212 54.2
Actinidia00958 Actinidia chinensis HOM05D007292 ORTHO05D009084 5.0e-45 185.3 214 54.7
Manes.07G131600 Manihot esculenta HOM05D007292 ORTHO05D009084 5.0e-45 185.3 211 54.0
PGR044G1044 Punica granatum HOM05D007292 ORTHO05D009084 6.6e-45 184.9 152 65.8
TWI09G0172 Tripterygium wilfordii HOM05D007292 ORTHO05D009084 8.6e-45 184.5 210 52.4
Haze_17244 Corylus avellana HOM05D004762 ORTHO05D005972 1.6e-43 180.3 212 50.0
CiPaw.01G300300 Carya illinoinensis HOM05D007292 ORTHO05D009084 2.1e-43 179.9 207 54.6
Cfa001300 Carpinus fangiana HOM05D007292 ORTHO05D009084 2.8e-43 179.5 210 49.5
CSS0010989 Camellia sinensis var. sinensis HOM05D007292 ORTHO05D009084 6.1e-43 178.3 219 49.8
GSVIVG01032790001 Vitis vinifera HOM05D007292 ORTHO05D009084 8.0e-43 177.9 210 52.4
Prupe.2G252500 Prunus persica HOM05D007292 ORTHO05D009084 1.8e-42 176.8 214 48.1
TWI53G0916 Tripterygium wilfordii HOM05D007292 ORTHO05D009084 3.0e-42 176.0 207 48.8
vmacro10031 Vaccinium macrocarpon HOM05D007292 ORTHO05D009084 4.0e-42 175.6 207 51.7
Solyc03g095990.1 Solanum lycopersicum HOM05D007292 ORTHO05D009084 1.2e-41 174.1 202 52.0
Sopen03g026090 Solanum pennellii HOM05D007292 ORTHO05D009084 1.5e-41 173.7 202 52.0
PGSC0003DMG400027726 Solanum tuberosum HOM05D007292 ORTHO05D009084 1.5e-41 173.7 187 53.5
Ciclev10032544m.g Citrus clementina HOM05D007292 ORTHO05D009084 2.0e-41 173.3 210 51.0
Eucgr.J00191 Eucalyptus grandis HOM05D007292 ORTHO05D009084 2.0e-41 173.3 197 53.8
Actinidia13950 Actinidia chinensis HOM05D007292 ORTHO05D009084 2.6e-41 172.9 188 54.8
MD01G1154900 Malus domestica HOM05D007292 ORTHO05D009084 2.6e-41 172.9 212 48.6
Cpa.g.sc19.157 Carica papaya HOM05D007292 ORTHO05D009084 3.4e-41 172.6 200 52.5
MELO3C018364.2 Cucumis melo HOM05D007292 ORTHO05D009084 3.4e-41 172.6 214 49.5
CsaV3_5G010290 Cucumis sativus L. HOM05D007292 ORTHO05D009084 3.4e-41 172.6 214 50.0
Nitab4.5_0002701g0020 Nicotiana tabacum HOM05D007292 ORTHO05D009084 4.4e-41 172.2 205 49.3
Gohir.A05G330800 Gossypium hirsutum HOM05D007292 ORTHO05D009084 7.5e-41 171.4 154 61.0
Sed0024586 Sechium edule HOM05D007292 ORTHO05D009084 7.5e-41 171.4 215 48.4
Hund13879 Selenicereus undatus HOM05D007292 ORTHO05D009084 7.5e-41 171.4 214 50.5
Gorai.012G078000 Gossypium raimondii HOM05D007292 ORTHO05D009084 1.7e-40 170.2 214 50.5
Atru.chr12.94 Acer truncatum HOM05D007292 ORTHO05D009084 2.2e-40 169.9 210 52.4
Peaxi162Scf00484g00003 Petunia axillaris HOM05D007292 ORTHO05D009084 2.9e-40 169.5 139 64.7
Gohir.D04G069400 Gossypium hirsutum HOM05D007292 ORTHO05D009084 3.7e-40 169.1 154 62.3
Potri.010G186800 Populus trichocarpa HOM05D007292 ORTHO05D009084 3.7e-40 169.1 213 49.8
Potri.008G070700 Populus trichocarpa HOM05D007292 ORTHO05D009084 4.9e-40 168.7 213 50.2
arahy.Tifrunner.gnm1.ann1.RI3S0A Arachis hypogaea HOM05D007292 ORTHO05D009084 8.3e-40 167.9 205 48.3
arahy.Tifrunner.gnm1.ann1.W7USAB Arachis hypogaea HOM05D007292 ORTHO05D009084 8.3e-40 167.9 205 48.3
Nitab4.5_0000487g0050 Nicotiana tabacum HOM05D007292 ORTHO05D009084 1.4e-39 167.2 187 52.4
Cc08_g07220 Coffea canephora HOM05D007292 ORTHO05D009084 3.2e-39 166.0 208 52.4
Lsat_1_v5_gn_2_124081 Lactuca sativa HOM05D007292 ORTHO05D009084 1.2e-38 164.1 206 50.5
QL08p063404 Quercus lobata HOM05D007292 ORTHO05D009084 1.2e-38 164.1 145 60.7
SalBow5G4600 Salvia bowleyana HOM05D007292 ORTHO05D009084 2.7e-38 162.9 209 48.8
Ah.16g103670 Amaranthus hybridus HOM05D007292 ORTHO05D009084 4.6e-38 162.2 211 49.8
FAN01G0766 Fragaria x ananassa HOM05D007292 ORTHO05D009084 4.6e-38 162.2 210 47.6
Lj6g0005846 Lotus japonicus HOM05D007292 ORTHO05D009084 4.6e-38 162.2 207 47.8
Aqoxy6G01833 Aquilegia oxysepala HOM05D007292 ORTHO05D009084 5.9e-38 161.8 120 70.8
FvH4_7g24710 Fragaria vesca HOM05D007292 ORTHO05D009084 5.9e-38 161.8 215 47.0
FAN03G0495 Fragaria x ananassa HOM05D004762 ORTHO05D005972 5.9e-38 161.8 215 47.0
FAN06G1000 Fragaria x ananassa HOM05D007292 ORTHO05D009084 5.9e-38 161.8 215 47.0
FAN10G1098 Fragaria x ananassa HOM05D007292 ORTHO05D009084 5.9e-38 161.8 215 47.4
Sc10g0002470 Simmondsia chinensis HOM05D007292 ORTHO05D009084 7.8e-38 161.4 172 56.4
Rhsim09G0178500 Rhododendron simsii HOM05D007292 ORTHO05D009084 1.0e-37 161.0 208 49.0
Lalb_Chr08g0231651 Lupinus albus HOM05D007292 ORTHO05D009084 1.7e-37 160.2 212 44.8
SalBow5G0252 Salvia bowleyana HOM05D007292 ORTHO05D009084 3.0e-37 159.5 127 64.6
Glyma.11G231200 Glycine max HOM05D007292 ORTHO05D009084 6.6e-37 158.3 211 46.9
DCAR_011829 Daucus carota HOM05D007292 ORTHO05D009084 1.5e-36 157.1 117 66.7
MD07G1224000 Malus domestica HOM05D007292 ORTHO05D009084 1.9e-36 156.8 111 66.7
AUR62022909 Chenopodium quinoa HOM05D007292 ORTHO05D009084 5.6e-36 155.2 150 58.0
ClCG07G004350 Citrullus lanatus HOM05D007292 ORTHO05D009084 5.6e-36 155.2 193 54.4
Glyma.18G025900 Glycine max HOM05D007292 ORTHO05D009084 5.6e-36 155.2 212 46.7
CANSAT56G1912 Cannabis sativa HOM05D007292 ORTHO05D009084 1.6e-35 153.7 142 59.9
ECA238G0254 Erigeron canadensis HOM05D007292 ORTHO05D009084 2.1e-35 153.3 206 50.0
Hma1.2p1_0145F.1_g065370 Hydrangea macrophylla HOM05D007292 ORTHO05D009084 2.8e-35 152.9 106 72.6
Hma1.2p1_2705F.1_g327175 Hydrangea macrophylla HOM05D007292 ORTHO05D009084 2.8e-35 152.9 106 72.6
Phvul.001G244400 Phaseolus vulgaris HOM05D007292 ORTHO05D009084 2.8e-35 152.9 211 44.5
RcHm_v2.0_Chr1g0370551 Rosa chinensis HOM05D007292 ORTHO05D009084 4.7e-35 152.1 215 46.0
Sabra08G0052000 Salix brachista HOM05D007292 ORTHO05D009084 6.2e-35 151.8 203 46.8
HanXRQChr14g0459531 Helianthus annuus HOM05D007292 ORTHO05D009084 1.0e-34 151.0 126 65.1
Medtr3g070960 Medicago truncatula HOM05D007292 ORTHO05D009084 1.0e-34 151.0 206 46.6
C04p36460 Brassica napus HOM05D007292 ORTHO05D009084 1.4e-34 150.6 140 58.6
BolC4t25149H Brassica oleracea HOM05D007292 ORTHO05D009084 1.4e-34 150.6 140 58.6
TPR.G11203 Trifolium pratense HOM05D007292 ORTHO05D009084 1.4e-34 150.6 205 45.4
BcaC02g09799 Brassica carinata HOM05D007292 ORTHO05D009084 1.8e-34 150.2 140 58.6
THA.LOC104824327 Tarenaya hassleriana HOM05D007292 ORTHO05D009084 1.8e-34 150.2 128 68.0
A09p48960 Brassica napus HOM05D007292 ORTHO05D009084 3.1e-34 149.4 115 66.1
C08p31330 Brassica napus HOM05D007292 ORTHO05D009084 3.1e-34 149.4 115 66.1
BolC8t50754H Brassica oleracea HOM05D007292 ORTHO05D009084 3.1e-34 149.4 115 66.1
BraA09t40351Z Brassica rapa HOM05D007292 ORTHO05D009084 3.1e-34 149.4 115 66.1
EL10Ac2g04856 Beta vulgaris HOM05D007292 ORTHO05D009084 4.0e-34 149.1 179 50.8
BraA04t16126Z Brassica rapa HOM05D007292 ORTHO05D009084 4.0e-34 149.1 138 58.7
PSO384G0417 Papaver somniferum HOM05D007292 ORTHO05D009084 4.0e-34 149.1 205 46.3
Psat5g129440 Pisum sativum HOM05D007292 ORTHO05D009084 5.2e-34 148.7 209 45.9
Thhalv10006239m.g Eutrema salsugineum HOM05D007292 ORTHO05D009084 8.9e-34 147.9 146 56.2
Sp5g06520 Schrenkiella parvula HOM05D007292 ORTHO05D009084 8.9e-34 147.9 146 56.2
THA.LOC104811239 Tarenaya hassleriana HOM05D007292 ORTHO05D009084 1.2e-33 147.5 147 57.1
CARHR166090 Cardamine hirsuta HOM05D007292 ORTHO05D009084 2.6e-33 146.4 142 54.9
Aa31LG10G10950 Aethionema arabicum HOM05D007292 ORTHO05D009084 3.4e-33 146.0 154 54.5
AT3G56010 Arabidopsis thaliana HOM05D007292 ORTHO05D009084 3.4e-33 146.0 154 53.9
BcaB01g00041 Brassica carinata HOM05D007292 ORTHO05D009084 3.4e-33 146.0 161 50.9
VMungo1383G3483 Vigna mungo HOM05D001399 ORTHO05D001670 3.4e-33 146.0 209 45.0
AL5G37290 Arabidopsis lyrata HOM05D007292 ORTHO05D009084 4.4e-33 145.6 152 52.0
A04p04080 Brassica napus HOM05D007292 ORTHO05D009084 9.8e-33 144.4 138 57.2
Carub.0005s2275 Capsella rubella HOM05D007292 ORTHO05D009084 9.8e-33 144.4 176 47.7
TAR636G1797 Trochodendron aralioides HOM05D007292 ORTHO05D009084 1.7e-32 143.7 167 55.1
Migut.F01485 Erythranthe guttata HOM05D007292 ORTHO05D009084 2.2e-32 143.3 154 52.6
Zm00001eb013500 Zea mays HOM05D007292 ORTHO05D009084 5.0e-29 132.1 176 47.7
Os03g0293100 Oryza sativa ssp. japonica HOM05D007292 ORTHO05D009084 1.5e-28 130.6 137 57.7
Ca_15135_v3 Cicer arietinum L. HOM05D007292 ORTHO05D009084 1.9e-28 130.2 206 42.7
Hma1.2p1_2705F.1_g327170 Hydrangea macrophylla HOM05D001399 ORTHO05D001670 3.3e-28 129.4 182 48.9
Nn2g13181 Nelumbo nucifera HOM05D007292 ORTHO05D009084 6.8e-26 121.7 182 46.2
Sabra10G0144000 Salix brachista HOM05D007292 ORTHO05D009084 2.4e-23 113.2 177 46.3
BcaB02g08388 Brassica carinata HOM05D007292 ORTHO05D009084 3.2e-23 112.8 83 65.1
COL.COLO4_25767 Corchorus olitorius HOM05D004762 ORTHO05D005972 4.6e-22 109.0 159 44.7
SGA_v2.0_scaffold378G50330 Striga asiatica HOM05D007292 ORTHO05D009084 1.5e-20 104.0 194 41.2
SEGI_20884 Sequoiadendron giganteum HOM05D007292 ORTHO05D009084 1.1e-18 97.8 252 31.3
CDE04G1468 Ceratophyllum demersum HOM05D000652 ORTHO05D009084 1.8e-18 97.1 165 38.2
Pp3c10_22900 Physcomitrium patens HOM05D033432 ORTHO05D009084 5.4e-07 58.9 189 31.2
AagrBONN_evm.TU.Sc2ySwM_344.666 Anthoceros agrestis HOM05D007292 ORTHO05D009084 1.6e-06 57.4 126 34.1
Lsat_1_v5_gn_7_113640 Lactuca sativa HOM05D007823 ORTHO05D000174 2.1e-06 57.0 63 49.2
Mapoly0147s0009 Marchantia polymorpha HOM05D007292 ORTHO05D009084 4.6e-06 55.8 86 38.4
Lj8C64T12 Lonicera japonica HOM05D007292 ORTHO05D009084 7.8e-06 55.1 66 51.5


User provided reference genes

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