Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0681G219 Amborella trichopoda HOM05D000174 ORTHO05D001526 3.6e-100 368.6 239 100.0
CDE04G0175 Ceratophyllum demersum HOM05D000174 ORTHO05D000630 1.7e-09 67.4 182 28.6
Sp1g00270 Schrenkiella parvula HOM05D000174 ORTHO05D001526 5.5e-08 62.4 122 35.2
CDE07G1462 Ceratophyllum demersum HOM05D000174 ORTHO05D000630 2.1e-07 60.5 182 25.8
AT1G02040 Arabidopsis thaliana HOM05D000174 ORTHO05D001526 6.1e-07 58.9 125 34.4
Dinv43664 Davidia involucrata HOM05D000174 ORTHO05D001526 6.1e-07 58.9 50 56.0
SEGI_17344 Sequoiadendron giganteum HOM05D000174 ORTHO05D001526 6.1e-07 58.9 181 29.8
Atru.chr5.3548 Acer truncatum HOM05D000174 ORTHO05D001526 1.0e-06 58.2 52 53.8
A04p29080 Brassica napus HOM05D000104 ORTHO05D009920 1.0e-06 58.2 118 33.1
BraA04t18379Z Brassica rapa HOM05D000104 ORTHO05D009920 1.0e-06 58.2 118 33.1
Lj2C218T7 Lonicera japonica HOM05D000174 ORTHO05D001526 2.3e-06 57.0 46 58.7
Lalb_Chr13g0291851 Lupinus albus HOM05D000174 ORTHO05D001526 2.3e-06 57.0 116 32.8
VMungo0331G0774 Vigna mungo HOM05D000174 ORTHO05D001526 2.3e-06 57.0 43 62.8
Gohir.D12G097900 Gossypium hirsutum HOM05D000174 ORTHO05D001526 3.0e-06 56.6 45 60.0
Gorai.008G106600 Gossypium raimondii HOM05D000174 ORTHO05D001526 3.0e-06 56.6 45 60.0
Actinidia33484 Actinidia chinensis HOM05D000174 ORTHO05D001526 3.9e-06 56.2 49 55.1
Glyma.01G134100 Glycine max HOM05D000174 ORTHO05D001526 3.9e-06 56.2 44 59.1
TWI14G0545 Tripterygium wilfordii HOM05D000174 ORTHO05D001526 3.9e-06 56.2 121 33.1
vmacro21037 Vaccinium macrocarpon HOM05D000174 ORTHO05D001526 3.9e-06 56.2 48 56.2
Aa31LG1G11360 Aethionema arabicum HOM05D000174 ORTHO05D001526 5.1e-06 55.8 33 72.7
BcaC07g42345 Brassica carinata HOM05D000174 ORTHO05D001526 5.1e-06 55.8 33 72.7
C04p66310 Brassica napus HOM05D000104 ORTHO05D009920 5.1e-06 55.8 34 70.6
C08p54020 Brassica napus HOM05D000174 ORTHO05D001526 5.1e-06 55.8 33 72.7
BolC4t28135H Brassica oleracea HOM05D000104 ORTHO05D009920 5.1e-06 55.8 34 70.6
BolC8t52913H Brassica oleracea HOM05D000174 ORTHO05D001526 5.1e-06 55.8 33 72.7
CARHR000300 Cardamine hirsuta HOM05D000174 ORTHO05D001526 5.1e-06 55.8 33 72.7
Thhalv10008559m.g Eutrema salsugineum HOM05D000174 ORTHO05D001526 5.1e-06 55.8 33 72.7
HanXRQChr17g0568191 Helianthus annuus HOM05D000174 ORTHO05D001526 5.1e-06 55.8 58 48.3
Phvul.010G071100 Phaseolus vulgaris HOM05D000174 ORTHO05D001526 5.1e-06 55.8 43 60.5
Aqoxy3G03584 Aquilegia oxysepala HOM05D001658 ORTHO05D001406 6.7e-06 55.5 53 52.8
Carub.0001s0020 Capsella rubella HOM05D000174 ORTHO05D001526 6.7e-06 55.5 35 68.6
Gohir.A12G095300 Gossypium hirsutum HOM05D000174 ORTHO05D001526 6.7e-06 55.5 45 57.8
THA.LOC104801482 Tarenaya hassleriana HOM05D000174 ORTHO05D001526 6.7e-06 55.5 33 72.7
TWI79G0030 Tripterygium wilfordii HOM05D000174 ORTHO05D001526 6.7e-06 55.5 52 50.0
SEGI_37902 Sequoiadendron giganteum HOM05D000174 ORTHO05D001526 8.8e-06 55.1 37 67.6


User provided reference genes

Program Settings