Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0681G213 Amborella trichopoda HOM05D007530 ORTHO05D009556 9.0e-31 136.3 72 100.0
CDE12G0911 Ceratophyllum demersum HOM05D003492 ORTHO05D005115 1.8e-18 95.5 70 72.9
Phvul.008G096700 Phaseolus vulgaris HOM05D007530 ORTHO05D009556 2.3e-18 95.1 72 66.7
Glyma.16G098900 Glycine max HOM05D007530 ORTHO05D009556 3.9e-18 94.4 70 67.1
Glyma.18G203200 Glycine max HOM05D007530 ORTHO05D009556 5.1e-18 94.0 70 65.7
Hma1.2p1_0362F.1_g136440 Hydrangea macrophylla HOM05D007530 ORTHO05D009556 1.5e-17 92.4 67 68.7
Glyma.07G152100 Glycine max HOM05D007530 ORTHO05D009556 2.5e-17 91.7 70 65.7
MBI15_g24380_MAGBIO Magnolia biondii HOM05D007530 ORTHO05D009556 3.3e-17 91.3 70 62.9
TAR623G0260 Trochodendron aralioides HOM05D007530 ORTHO05D009556 4.3e-17 90.9 70 67.1
Ca_07655_v3 Cicer arietinum L. HOM05D007530 ORTHO05D009556 1.6e-16 89.0 70 68.6
GSVIVG01011181001 Vitis vinifera HOM05D007530 ORTHO05D009556 2.2e-16 88.6 70 67.1
Thecc.05G013400 Theobroma cacao HOM05D007530 ORTHO05D009556 3.7e-16 87.8 68 67.6
Gorai.012G115500 Gossypium raimondii HOM05D007530 ORTHO05D009556 6.3e-16 87.0 69 65.2
Lalb_Chr01g0023151 Lupinus albus HOM05D007530 ORTHO05D009556 6.3e-16 87.0 72 58.3
Gohir.A04G092400 Gossypium hirsutum HOM05D007530 ORTHO05D009556 8.2e-16 86.7 68 66.2
Gohir.D04G131700 Gossypium hirsutum HOM05D007530 ORTHO05D009556 8.2e-16 86.7 68 66.2
arahy.Tifrunner.gnm1.ann1.88RA0A Arachis hypogaea HOM05D007530 ORTHO05D009556 1.4e-15 85.9 67 65.7
CANSAT35G1517 Cannabis sativa HOM05D007530 ORTHO05D009556 1.4e-15 85.9 72 63.9
Nn2g13162 Nelumbo nucifera HOM05D007530 ORTHO05D009556 1.8e-15 85.5 70 64.3
HPP92_021352 Vanilla planifolia HOM05D007530 ORTHO05D009556 3.1e-15 84.7 67 65.7
CSS0025168 Camellia sinensis var. sinensis HOM05D007530 ORTHO05D009556 4.1e-15 84.3 67 65.7
Solyc10g085215.1 Solanum lycopersicum HOM05D007530 ORTHO05D009556 4.1e-15 84.3 70 60.0
Sopen10g034690 Solanum pennellii HOM05D007530 ORTHO05D009556 4.1e-15 84.3 70 60.0
Psat3g126880 Pisum sativum HOM05D007530 ORTHO05D009556 5.3e-15 84.0 70 64.3
Prupe.6G279800 Prunus persica HOM05D007530 ORTHO05D009556 5.3e-15 84.0 70 60.0
ClCG10G022290 Citrullus lanatus HOM05D007530 ORTHO05D009556 6.9e-15 83.6 69 62.3
Medtr7g068940 Medicago truncatula HOM05D007530 ORTHO05D009556 6.9e-15 83.6 70 64.3
Rhsim05G0217200 Rhododendron simsii HOM05D000043 ORTHO05D005398 6.9e-15 83.6 67 65.7
arahy.Tifrunner.gnm1.ann1.R0LR40 Arachis hypogaea HOM05D007530 ORTHO05D009556 9.0e-15 83.2 67 64.2
arahy.Tifrunner.gnm1.ann1.ZMF41F Arachis hypogaea HOM05D007530 ORTHO05D009556 9.0e-15 83.2 67 64.2
Sed0024664 Sechium edule HOM05D007530 ORTHO05D009556 9.0e-15 83.2 70 61.4
HPP92_021347 Vanilla planifolia HOM05D007530 ORTHO05D009556 9.0e-15 83.2 67 64.2
Duzib106G1059 Durio zibethinus HOM05D007530 ORTHO05D009556 1.2e-14 82.8 68 66.2
PGSC0003DMG400011024 Solanum tuberosum HOM05D007530 ORTHO05D009556 1.5e-14 82.4 70 58.6
ECA247G1901 Erigeron canadensis HOM05D007530 ORTHO05D009556 2.0e-14 82.0 68 63.2
Lalb_Chr19g0124461 Lupinus albus HOM05D007530 ORTHO05D009556 2.6e-14 81.6 64 59.4
Manes.09G107300 Manihot esculenta HOM05D007530 ORTHO05D009556 2.6e-14 81.6 70 62.9
Potri.016G118800 Populus trichocarpa HOM05D007530 ORTHO05D009556 3.4e-14 81.3 70 60.0
PGSC0003DMG400019174 Solanum tuberosum HOM05D007530 ORTHO05D009556 3.4e-14 81.3 70 57.1
CiPaw.10G157500 Carya illinoinensis HOM05D007530 ORTHO05D009556 4.5e-14 80.9 70 58.6
Potri.006G101901 Populus trichocarpa HOM05D007530 ORTHO05D009556 4.5e-14 80.9 70 60.0
Nitab4.5_0000770g0040 Nicotiana tabacum HOM05D007530 ORTHO05D009556 7.7e-14 80.1 67 59.7
Manes.08G093800 Manihot esculenta HOM05D007530 ORTHO05D009556 1.0e-13 79.7 70 60.0
THA.LOC109117252 Tarenaya hassleriana HOM05D007530 ORTHO05D009556 1.0e-13 79.7 71 56.3
MELO3C009149.2 Cucumis melo HOM05D007530 ORTHO05D009556 1.3e-13 79.3 70 58.6
CsaV3_3G033590 Cucumis sativus L. HOM05D007530 ORTHO05D009556 1.3e-13 79.3 70 60.0
Duzib093G1475 Durio zibethinus HOM05D007530 ORTHO05D009556 2.2e-13 78.6 68 61.8
Nitab4.5_0004107g0030 Nicotiana tabacum HOM05D007530 ORTHO05D009556 2.2e-13 78.6 67 58.2
COL.COLO4_14508 Corchorus olitorius HOM05D002620 ORTHO05D006469 3.8e-13 77.8 64 57.8
Aa31LG5G18900 Aethionema arabicum HOM05D007530 ORTHO05D009556 5.0e-13 77.4 71 57.7
Thhalv10015199m.g Eutrema salsugineum HOM05D007530 ORTHO05D009556 6.5e-13 77.0 71 53.5
Nitab4.5_0003514g0010 Nicotiana tabacum HOM05D007530 ORTHO05D009556 6.5e-13 77.0 70 55.7
SalBow4G2966 Salvia bowleyana HOM05D007530 ORTHO05D009556 6.5e-13 77.0 68 54.4
Sc01g0006890 Simmondsia chinensis HOM05D007530 ORTHO05D009556 8.5e-13 76.6 70 60.0
TPR.G2527 Trifolium pratense HOM05D007530 ORTHO05D009556 8.5e-13 76.6 68 64.7
PSO384G0267 Papaver somniferum HOM05D007530 ORTHO05D009556 1.1e-12 76.3 67 58.2
CARHR211730 Cardamine hirsuta HOM05D007530 ORTHO05D009556 1.4e-12 75.9 71 56.3
Migut.L02025 Erythranthe guttata HOM05D007530 ORTHO05D009556 1.4e-12 75.9 70 57.1
Hund10987 Selenicereus undatus HOM05D007530 ORTHO05D009556 1.4e-12 75.9 67 59.7
Nitab4.5_0000444g0050 Nicotiana tabacum HOM05D007530 ORTHO05D009556 3.2e-12 74.7 70 54.3
Sp6g40660 Schrenkiella parvula HOM05D007530 ORTHO05D009556 3.2e-12 74.7 71 53.5
AT5G01350 Arabidopsis thaliana HOM05D007530 ORTHO05D009556 4.2e-12 74.3 71 54.9
Sabra06G0078200 Salix brachista HOM05D007530 ORTHO05D009556 4.2e-12 74.3 67 55.2
Carub.0006s0047 Capsella rubella HOM05D007530 ORTHO05D009556 5.5e-12 73.9 71 54.9
unitig_37.g12653 Utricularia gibba HOM05D007530 ORTHO05D009556 5.5e-12 73.9 70 51.4
AL6G10780 Arabidopsis lyrata HOM05D007530 ORTHO05D009556 9.4e-12 73.2 71 54.9
PGR142G0763 Punica granatum HOM05D007530 ORTHO05D009556 9.4e-12 73.2 68 55.9
BcaB01g06225 Brassica carinata HOM05D007530 ORTHO05D009556 1.2e-11 72.8 71 52.1
Haze_21023 Corylus avellana HOM05D002620 ORTHO05D006469 1.2e-11 72.8 89 48.3
C03p00510 Brassica napus HOM05D000406 ORTHO05D006918 1.6e-11 72.4 70 52.9
BolC3t12617H Brassica oleracea HOM05D000406 ORTHO05D006918 1.6e-11 72.4 70 52.9
A03p00350 Brassica napus HOM05D000406 ORTHO05D006918 3.6e-11 71.2 65 55.4
BraA03t09426Z Brassica rapa HOM05D000406 ORTHO05D006918 3.6e-11 71.2 65 55.4
Aa31LG1G23010 Aethionema arabicum HOM05D007530 ORTHO05D009556 4.6e-11 70.9 65 55.4
FvH4_6g11210 Fragaria vesca HOM05D007530 ORTHO05D009556 6.1e-11 70.5 67 52.2
FAN02G2108 Fragaria x ananassa HOM05D007530 ORTHO05D009556 6.1e-11 70.5 67 52.2
FAN09G3168 Fragaria x ananassa HOM05D007530 ORTHO05D009556 6.1e-11 70.5 67 52.2
FAN14G2496 Fragaria x ananassa HOM05D007530 ORTHO05D009556 6.1e-11 70.5 67 52.2
FAN14G3881 Fragaria x ananassa HOM05D007530 ORTHO05D009556 6.1e-11 70.5 67 52.2
MD12G1171600 Malus domestica HOM05D007530 ORTHO05D009556 6.1e-11 70.5 69 55.1
HanXRQChr10g0294071 Helianthus annuus HOM05D007530 ORTHO05D009556 7.9e-11 70.1 68 52.9
RcHm_v2.0_Chr3g0462691 Rosa chinensis HOM05D007530 ORTHO05D009556 7.9e-11 70.1 67 52.2
Cc06_g01140 Coffea canephora HOM05D007530 ORTHO05D009556 1.0e-10 69.7 50 66.0
Os04g0508100 Oryza sativa ssp. japonica HOM05D007530 ORTHO05D009556 3.9e-10 67.8 60 56.7
TWI74G1090 Tripterygium wilfordii HOM05D007530 ORTHO05D009556 5.1e-10 67.4 68 54.4
FAN05G2692 Fragaria x ananassa HOM05D007530 ORTHO05D009556 8.8e-10 66.6 65 50.8
Mapoly0015s0144 Marchantia polymorpha HOM05D007530 ORTHO05D009556 1.1e-09 66.2 69 49.3
EL10Ac5g12543 Beta vulgaris HOM05D007530 ORTHO05D009556 2.5e-09 65.1 67 50.7
Eucgr.G03069 Eucalyptus grandis HOM05D007530 ORTHO05D009556 5.7e-09 63.9 44 72.7
Aqoxy2G00850 Aquilegia oxysepala HOM05D007530 ORTHO05D009556 7.4e-09 63.5 71 47.9
AagrBONN_evm.TU.Sc2ySwM_117.3278 Anthoceros agrestis HOM05D007530 ORTHO05D009556 8.2e-08 60.1 65 43.1
Pp3c21_22550 Physcomitrium patens HOM05D007530 ORTHO05D009556 8.2e-08 60.1 67 46.3
Zm00001eb426270 Zea mays HOM05D007530 ORTHO05D009556 1.1e-07 59.7 61 52.5
Lsat_1_v5_gn_9_35161 Lactuca sativa HOM05D007530 ORTHO05D009556 2.6e-06 55.1 46 58.7
PRCOL_00001270 Prasinoderma coloniale HOM05D007530 ORTHO05D009556 7.7e-06 53.5 59 47.5


User provided reference genes

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