Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0681G199 Amborella trichopoda HOM05D007537 ORTHO05D009602 2.8e-186 655.2 346 100.0
Duzib114G0965 Durio zibethinus HOM05D007537 ORTHO05D009602 8.4e-34 148.7 396 34.3
vmacro10037 Vaccinium macrocarpon HOM05D007537 ORTHO05D009602 1.1e-33 148.3 385 34.3
Actinidia13942 Actinidia chinensis HOM05D007537 ORTHO05D009602 5.5e-33 146.0 390 34.6
Nitab4.5_0000797g0160 Nicotiana tabacum HOM05D007537 ORTHO05D009602 2.1e-32 144.1 385 33.2
Solyc06g051360.3 Solanum lycopersicum HOM05D007537 ORTHO05D009602 2.1e-32 144.1 390 33.1
Thecc.10G014900 Theobroma cacao HOM05D007537 ORTHO05D009602 2.7e-32 143.7 392 34.2
DCAR_011821 Daucus carota HOM05D007537 ORTHO05D009602 4.6e-32 142.9 351 35.0
Rhsim09G0177700 Rhododendron simsii HOM05D007537 ORTHO05D009602 6.0e-32 142.5 358 33.5
Prupe.2G251400 Prunus persica HOM05D007537 ORTHO05D009602 1.0e-31 141.7 400 32.5
Sopen06g017350 Solanum pennellii HOM05D007537 ORTHO05D009602 1.8e-31 141.0 392 32.9
MBI03_g40958_MAGBIO Magnolia biondii HOM05D007537 ORTHO05D009602 3.0e-31 140.2 340 35.0
TAR633G2636 Trochodendron aralioides HOM05D007537 ORTHO05D009602 3.9e-31 139.8 388 31.7
Nn2g10869 Nelumbo nucifera HOM05D007537 ORTHO05D009602 5.1e-31 139.4 407 31.9
PGSC0003DMG400024236 Solanum tuberosum HOM05D007537 ORTHO05D009602 6.7e-31 139.0 397 35.3
Cc02_g06360 Coffea canephora HOM05D007537 ORTHO05D009602 1.1e-30 138.3 388 32.0
COL.COLO4_25746 Corchorus olitorius HOM05D007537 ORTHO05D009602 2.5e-30 137.1 392 31.9
Nitab4.5_0008231g0020 Nicotiana tabacum HOM05D007537 ORTHO05D009602 1.3e-29 134.8 391 33.2
Peaxi162Scf00284g01051 Petunia axillaris HOM05D007537 ORTHO05D009602 3.7e-29 133.3 367 33.0
arahy.Tifrunner.gnm1.ann1.EU49LP Arachis hypogaea HOM05D007537 ORTHO05D009602 1.8e-28 131.0 354 31.9
Cfa001307 Carpinus fangiana HOM05D007537 ORTHO05D009602 1.8e-28 131.0 383 34.2
Manes.07G130900 Manihot esculenta HOM05D007537 ORTHO05D009602 1.8e-28 131.0 389 30.8
Haze_17238 Corylus avellana HOM05D007537 ORTHO05D009602 2.4e-28 130.6 376 34.0
FAN03G1922 Fragaria x ananassa HOM05D007537 ORTHO05D009602 2.4e-28 130.6 373 30.8
FAN10G0956 Fragaria x ananassa HOM05D007537 ORTHO05D009602 3.1e-28 130.2 375 30.9
FAN01G2979 Fragaria x ananassa HOM05D007537 ORTHO05D009602 4.0e-28 129.8 373 30.8
Lsat_1_v5_gn_8_12620 Lactuca sativa HOM05D007537 ORTHO05D009602 3.4e-27 126.7 296 32.1
RcHm_v2.0_Chr1g0370441 Rosa chinensis HOM05D007537 ORTHO05D009602 5.8e-27 125.9 377 29.4
CSS0034530 Camellia sinensis var. sinensis HOM05D007537 ORTHO05D009602 1.3e-26 124.8 384 32.6
FAN06G1236 Fragaria x ananassa HOM05D007537 ORTHO05D009602 1.3e-26 124.8 374 30.2
CiPaw.01G299800 Carya illinoinensis HOM05D007537 ORTHO05D009602 1.7e-26 124.4 397 31.5
arahy.Tifrunner.gnm1.ann1.QLS93X Arachis hypogaea HOM05D007537 ORTHO05D009602 2.2e-26 124.0 366 30.9
Medtr5g082850 Medicago truncatula HOM05D007537 ORTHO05D009602 2.9e-26 123.6 352 32.7
MSTRG.27338 Avicennia marina HOM05D007537 ORTHO05D009602 4.9e-26 122.9 371 33.4
CSS0047961 Camellia sinensis var. sinensis HOM05D007537 ORTHO05D009602 8.4e-26 122.1 393 31.6
Ciclev10031789m.g Citrus clementina HOM05D007537 ORTHO05D009602 8.4e-26 122.1 373 30.8
ECA233G1171 Erigeron canadensis HOM05D007537 ORTHO05D009602 8.4e-26 122.1 362 30.4
Sabra08G0051400 Salix brachista HOM05D007537 ORTHO05D009602 1.1e-25 121.7 349 33.2
Aqoxy2G00863 Aquilegia oxysepala HOM05D007537 ORTHO05D009602 4.2e-25 119.8 386 29.8
FvH4_7g24610 Fragaria vesca HOM05D007537 ORTHO05D009602 9.3e-25 118.6 374 29.9
Glyma.02G257900 Glycine max HOM05D007537 ORTHO05D009602 2.7e-24 117.1 359 32.9
Thhalv10020993m.g Eutrema salsugineum HOM05D007537 ORTHO05D009602 4.6e-24 116.3 340 31.2
ClCG07G004310 Citrullus lanatus HOM05D007537 ORTHO05D009602 7.9e-24 115.5 386 31.9
Psat2g031640 Pisum sativum HOM05D007537 ORTHO05D009602 7.9e-24 115.5 346 31.2
HanXRQChr08g0221761 Helianthus annuus HOM05D007537 ORTHO05D009602 1.0e-23 115.2 334 32.3
Ca_05971_v3 Cicer arietinum L. HOM05D007537 ORTHO05D009602 1.3e-23 114.8 378 31.0
Ca_05972_v3 Cicer arietinum L. HOM05D007537 ORTHO05D009602 1.3e-23 114.8 378 31.0
CSS0001440 Camellia sinensis var. sinensis HOM05D007537 ORTHO05D009602 2.3e-23 114.0 393 31.3
LjContig00357g0012610 Lotus japonicus HOM05D007537 ORTHO05D009602 2.3e-23 114.0 355 32.7
Dinv21742 Davidia involucrata HOM05D007537 ORTHO05D009602 3.0e-23 113.6 204 37.3
Migut.F00693 Erythranthe guttata HOM05D007537 ORTHO05D009602 6.7e-23 112.5 327 30.6
PSO384G1417 Papaver somniferum HOM05D007537 ORTHO05D009602 8.7e-23 112.1 392 30.6
BolC1t05333H Brassica oleracea HOM05D007537 ORTHO05D009602 2.5e-22 110.5 344 31.4
Gorai.013G017500 Gossypium raimondii HOM05D007537 ORTHO05D009602 2.5e-22 110.5 303 32.0
THA.LOC104823184 Tarenaya hassleriana HOM05D007537 ORTHO05D009602 3.3e-22 110.2 353 30.6
VMungo0647G0018 Vigna mungo HOM05D007537 ORTHO05D009602 4.3e-22 109.8 346 32.7
Lalb_Chr04g0250531 Lupinus albus HOM05D007537 ORTHO05D009602 5.7e-22 109.4 356 32.0
Hund13875 Selenicereus undatus HOM05D007537 ORTHO05D009602 5.7e-22 109.4 386 30.3
TPR.G38413 Trifolium pratense HOM05D007537 ORTHO05D009602 7.4e-22 109.0 313 31.3
BcaC09g48157 Brassica carinata HOM05D007537 ORTHO05D009602 1.6e-21 107.8 344 31.7
Gohir.D13G016000 Gossypium hirsutum HOM05D007537 ORTHO05D009602 2.2e-21 107.5 391 30.2
BcaB04g21148 Brassica carinata HOM05D007537 ORTHO05D009602 2.8e-21 107.1 344 32.6
Potri.008G069800 Populus trichocarpa HOM05D007537 ORTHO05D009602 3.7e-21 106.7 346 32.1
GSVIVG01032801001 Vitis vinifera HOM05D007537 ORTHO05D009602 4.8e-21 106.3 316 32.6
AUR62022900 Chenopodium quinoa HOM05D007537 ORTHO05D009602 6.3e-21 105.9 387 30.0
SGA_v2.0_scaffold44G16701 Striga asiatica HOM05D007537 ORTHO05D009602 6.3e-21 105.9 345 32.2
PGR044G1397 Punica granatum HOM05D007537 ORTHO05D009602 1.1e-20 105.1 401 30.4
CARHR085730 Cardamine hirsuta HOM05D007537 ORTHO05D009602 1.4e-20 104.8 350 29.4
Ah.10g036610 Amaranthus hybridus HOM05D007537 ORTHO05D009602 2.4e-20 104.0 406 31.0
Phvul.008G223100 Phaseolus vulgaris HOM05D007537 ORTHO05D009602 3.1e-20 103.6 356 31.7
Eucgr.J00197 Eucalyptus grandis HOM05D007537 ORTHO05D009602 1.2e-19 101.7 314 30.6
Aa31LG3G4310 Aethionema arabicum HOM05D007537 ORTHO05D009602 1.5e-19 101.3 340 30.6
Sc10g0002440 Simmondsia chinensis HOM05D007537 ORTHO05D009602 2.6e-19 100.5 369 32.5
AL3G22670 Arabidopsis lyrata HOM05D007537 ORTHO05D009602 7.7e-19 99.0 353 28.9
Sp3g09450 Schrenkiella parvula HOM05D007537 ORTHO05D009602 7.7e-19 99.0 304 31.2
AT3G11150 Arabidopsis thaliana HOM05D007537 ORTHO05D009602 2.2e-18 97.4 350 30.6
BraA01t04198Z Brassica rapa HOM05D007537 ORTHO05D009602 2.9e-18 97.1 338 31.1
AUR62012265 Chenopodium quinoa HOM05D007537 ORTHO05D009602 3.8e-18 96.7 335 30.1
Carub.0003s1045 Capsella rubella HOM05D007537 ORTHO05D009602 4.6e-16 89.7 293 29.4
Gohir.A13G014800 Gossypium hirsutum HOM05D007537 ORTHO05D009602 3.9e-15 86.7 303 31.7
EL10Ac2g04847 Beta vulgaris HOM05D007537 ORTHO05D009602 2.5e-14 84.0 364 27.7
SEGI_28444 Sequoiadendron giganteum HOM05D007537 ORTHO05D008256 4.1e-12 76.6 356 26.4
SEGI_29994 Sequoiadendron giganteum HOM05D007537 ORTHO05D008256 4.1e-12 76.6 356 26.4
Os01g0830500 Oryza sativa ssp. japonica HOM05D007537 ORTHO05D009602 5.0e-10 69.7 344 27.3
HPP92_007582 Vanilla planifolia HOM05D007537 ORTHO05D009602 8.5e-10 68.9 337 27.6
CSS0044280 Camellia sinensis var. sinensis HOM05D007537 ORTHO05D009602 4.7e-08 63.2 121 39.7
MD01G1154400 Malus domestica HOM05D007537 ORTHO05D009602 1.4e-07 61.6 112 33.0
SEGI_01266 Sequoiadendron giganteum HOM05D007537 ORTHO05D009602 1.8e-07 61.2 293 24.9


User provided reference genes

Program Settings