Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0681G143 Amborella trichopoda HOM05D005957 ORTHO05D007318 2.1e-95 352.4 186 100.0
COL.COLO4_11196 Corchorus olitorius HOM05D005957 ORTHO05D007318 7.7e-34 147.9 177 46.9
Sabra19G0126000 Salix brachista HOM05D005957 ORTHO05D007318 2.1e-31 139.8 160 50.0
Aqoxy2G00718 Aquilegia oxysepala HOM05D005957 ORTHO05D007318 6.1e-31 138.3 114 57.0
Potri.019G128400 Populus trichocarpa HOM05D005957 ORTHO05D007318 3.0e-30 136.0 160 48.8
Atru.chr1.2524 Acer truncatum HOM05D005957 ORTHO05D007318 8.8e-30 134.4 185 45.4
Cfa011817 Carpinus fangiana HOM05D005957 ORTHO05D007318 8.8e-30 134.4 160 45.0
Duzib168G0649 Durio zibethinus HOM05D005957 ORTHO05D007318 1.2e-29 134.0 176 43.2
FvH4_3g40300 Fragaria vesca HOM05D005957 ORTHO05D007318 1.2e-29 134.0 169 45.0
FAN16G3236 Fragaria x ananassa HOM05D005957 ORTHO05D007318 1.2e-29 134.0 156 46.8
FAN11G2330 Fragaria x ananassa HOM05D005957 ORTHO05D007318 1.5e-29 133.7 160 45.6
QL01p025125 Quercus lobata HOM05D005957 ORTHO05D007318 1.5e-29 133.7 179 46.4
Thecc.09G362300 Theobroma cacao HOM05D005957 ORTHO05D007318 1.5e-29 133.7 106 62.3
GSVIVG01024580001 Vitis vinifera HOM05D005957 ORTHO05D007318 2.0e-29 133.3 169 46.7
Potri.013G155300 Populus trichocarpa HOM05D005957 ORTHO05D007318 5.7e-29 131.7 161 47.8
Prupe.6G042800 Prunus persica HOM05D005957 ORTHO05D007318 5.7e-29 131.7 174 43.7
TWI79G1455 Tripterygium wilfordii HOM05D005957 ORTHO05D007318 5.7e-29 131.7 112 58.0
Oeu064677.1 Olea europaea HOM05D005957 ORTHO05D007318 7.5e-29 131.3 167 43.1
FAN21G1009 Fragaria x ananassa HOM05D005957 ORTHO05D007318 9.8e-29 131.0 173 44.5
Nitab4.5_0007927g0010 Nicotiana tabacum HOM05D005957 ORTHO05D007318 9.8e-29 131.0 173 43.9
Haze_24453 Corylus avellana HOM05D005957 ORTHO05D007318 1.3e-28 130.6 160 45.6
FAN25G1085 Fragaria x ananassa HOM05D005957 ORTHO05D007318 1.3e-28 130.6 114 55.3
TAR623G0423 Trochodendron aralioides HOM05D005957 ORTHO05D007318 1.7e-28 130.2 106 61.3
Nitab4.5_0000002g0080 Nicotiana tabacum HOM05D005957 ORTHO05D007318 2.2e-28 129.8 185 41.6
Gorai.009G137600 Gossypium raimondii HOM05D005957 ORTHO05D007318 2.8e-28 129.4 183 44.8
Gohir.A05G129400 Gossypium hirsutum HOM05D005957 ORTHO05D007318 3.7e-28 129.0 181 40.9
Sabra13G0125100 Salix brachista HOM05D005957 ORTHO05D007318 3.7e-28 129.0 115 58.3
Peaxi162Scf01692g00003 Petunia axillaris HOM05D005957 ORTHO05D007318 4.8e-28 128.6 112 56.2
Manes.18G139500 Manihot esculenta HOM05D005957 ORTHO05D007318 8.3e-28 127.9 161 44.1
VMungo0647G0754 Vigna mungo HOM05D005957 ORTHO05D007318 1.1e-27 127.5 165 45.5
Glyma.14G203500 Glycine max HOM05D005957 ORTHO05D007318 1.4e-27 127.1 174 43.7
Gohir.D05G134050 Gossypium hirsutum HOM05D005957 ORTHO05D007318 1.8e-27 126.7 115 53.9
MD11G1055300 Malus domestica HOM05D005957 ORTHO05D007318 2.4e-27 126.3 179 44.7
Hma1.2p1_0119F.1_g056870 Hydrangea macrophylla HOM05D005957 ORTHO05D007318 4.1e-27 125.6 162 41.4
CiPaw.13G065100 Carya illinoinensis HOM05D005957 ORTHO05D007318 7.0e-27 124.8 165 43.6
RcHm_v2.0_Chr5g0072641 Rosa chinensis HOM05D005957 ORTHO05D007318 9.1e-27 124.4 166 42.8
CANSAT54G0691 Cannabis sativa HOM05D005957 ORTHO05D007318 1.2e-26 124.0 179 43.6
Medtr5g075190 Medicago truncatula HOM05D005957 ORTHO05D007318 1.2e-26 124.0 159 45.3
Psat2g052120 Pisum sativum HOM05D005957 ORTHO05D007318 1.2e-26 124.0 122 51.6
MBI03_g02190_MAGBIO Magnolia biondii HOM05D005957 ORTHO05D007318 1.6e-26 123.6 179 43.0
Cc01_g15210 Coffea canephora HOM05D005957 ORTHO05D007318 2.0e-26 123.2 177 43.5
Lalb_Chr17g0345591 Lupinus albus HOM05D005957 ORTHO05D007318 2.0e-26 123.2 145 46.9
Cpa.g.sc2.317 Carica papaya HOM05D005957 ORTHO05D007318 2.7e-26 122.9 104 57.7
Glyma.02G235500 Glycine max HOM05D005957 ORTHO05D007318 2.7e-26 122.9 111 60.4
Nitab4.5_0002091g0020 Nicotiana tabacum HOM05D005957 ORTHO05D007318 3.5e-26 122.5 170 43.5
Phvul.008G248400 Phaseolus vulgaris HOM05D005957 ORTHO05D007318 3.5e-26 122.5 174 43.7
Ca_05700_v3 Cicer arietinum L. HOM05D005957 ORTHO05D007318 4.5e-26 122.1 129 51.2
Ca_30026_v3 Cicer arietinum L. HOM05D005957 ORTHO05D007318 4.5e-26 122.1 129 51.2
CsaV3_6G019090 Cucumis sativus L. HOM05D005957 ORTHO05D007318 4.5e-26 122.1 112 58.9
PGSC0003DMG400046061 Solanum tuberosum HOM05D005957 ORTHO05D007318 5.9e-26 121.7 112 55.4
TPR.G25771 Trifolium pratense HOM05D005957 ORTHO05D007318 5.9e-26 121.7 164 44.5
LjContig00141g0008224 Lotus japonicus HOM05D005957 ORTHO05D007318 1.3e-25 120.6 161 44.1
Solyc06g082450.1 Solanum lycopersicum HOM05D005957 ORTHO05D007318 1.3e-25 120.6 170 40.0
CiPaw.14G051700 Carya illinoinensis HOM05D005957 ORTHO05D007318 1.7e-25 120.2 117 55.6
Solyc01g090870.1 Solanum lycopersicum HOM05D005957 ORTHO05D007318 1.7e-25 120.2 165 41.2
Sopen01g036610 Solanum pennellii HOM05D005957 ORTHO05D007318 2.3e-25 119.8 165 41.2
Oeu011373.1 Olea europaea HOM05D005957 ORTHO05D007318 3.8e-25 119.0 109 53.2
ClCG02G019100 Citrullus lanatus HOM05D005957 ORTHO05D007318 6.6e-25 118.2 92 62.0
HanXRQChr01g0028631 Helianthus annuus HOM05D005957 ORTHO05D007318 6.6e-25 118.2 114 54.4
Sed0019639 Sechium edule HOM05D005957 ORTHO05D007318 8.6e-25 117.9 108 56.5
MELO3C026874.2 Cucumis melo HOM05D005957 ORTHO05D007318 1.1e-24 117.5 89 61.8
Eucgr.J01842 Eucalyptus grandis HOM05D005957 ORTHO05D007318 1.1e-24 117.5 105 55.2
CSS0038993 Camellia sinensis var. sinensis HOM05D005957 ORTHO05D007318 1.9e-24 116.7 106 57.5
Peaxi162Scf00390g00049 Petunia axillaris HOM05D005957 ORTHO05D007318 1.9e-24 116.7 161 42.9
Dinv04837 Davidia involucrata HOM05D005957 ORTHO05D007318 2.5e-24 116.3 110 50.9
Ciclev10003853m.g Citrus clementina HOM05D005957 ORTHO05D007318 5.5e-24 115.2 186 38.7
MD03G1053700 Malus domestica HOM05D005957 ORTHO05D007318 5.5e-24 115.2 183 38.8
ECA236G1285 Erigeron canadensis HOM05D005957 ORTHO05D007318 7.2e-24 114.8 116 52.6
Ah.08g217120 Amaranthus hybridus HOM05D005957 ORTHO05D007318 9.5e-24 114.4 184 38.6
Sopen06g033830 Solanum pennellii HOM05D005957 ORTHO05D007318 9.5e-24 114.4 108 54.6
HanXRQChr17g0565391 Helianthus annuus HOM05D005957 ORTHO05D007318 1.6e-23 113.6 121 48.8
Lsat_1_v5_gn_0_40840 Lactuca sativa HOM05D005957 ORTHO05D007318 1.6e-23 113.6 106 55.7
PSO170G5428 Papaver somniferum HOM05D005957 ORTHO05D007318 1.6e-23 113.6 110 54.5
Nn5g26879 Nelumbo nucifera HOM05D005957 ORTHO05D007318 2.8e-23 112.8 112 54.5
PSO017G7297 Papaver somniferum HOM05D005957 ORTHO05D007318 2.8e-23 112.8 110 54.5
CAN.G1872.4 Capsicum annuum HOM05D005957 ORTHO05D007318 3.6e-23 112.5 116 50.9
SGA_v2.0_scaffold77G25368 Striga asiatica HOM05D005957 ORTHO05D007318 3.6e-23 112.5 177 38.4
SalBow6G3501 Salvia bowleyana HOM05D005957 ORTHO05D007318 4.7e-23 112.1 103 58.3
Nitab4.5_0002759g0020 Nicotiana tabacum HOM05D005957 ORTHO05D007318 6.1e-23 111.7 168 41.7
Migut.N00743 Erythranthe guttata HOM05D005957 ORTHO05D007318 2.3e-22 109.8 117 52.1
Carub.0004s1155 Capsella rubella HOM05D005957 ORTHO05D007318 8.9e-22 107.8 163 42.3
PGR119G2032 Punica granatum HOM05D005957 ORTHO05D007318 8.9e-22 107.8 68 70.6
Phvul.006G076900 Phaseolus vulgaris HOM05D005957 ORTHO05D007318 1.2e-21 107.5 98 53.1
MSTRG.17909 Avicennia marina HOM05D005957 ORTHO05D007318 1.5e-21 107.1 105 48.6
vmacro02888 Vaccinium macrocarpon HOM05D005957 ORTHO05D007318 3.4e-21 105.9 113 50.4
AT2G30395 Arabidopsis thaliana HOM05D005957 ORTHO05D007318 9.8e-21 104.4 152 40.1
Rhsim13G0060900 Rhododendron simsii HOM05D005957 ORTHO05D007318 9.8e-21 104.4 109 50.5
Dinv28722 Davidia involucrata HOM05D005957 ORTHO05D007318 1.7e-20 103.6 90 56.7
Aa31LG5G6330 Aethionema arabicum HOM05D005957 ORTHO05D007318 2.2e-20 103.2 90 55.6
EL10Ac7g16454 Beta vulgaris HOM05D005957 ORTHO05D007318 2.2e-20 103.2 112 45.5
AL4G25260 Arabidopsis lyrata HOM05D005957 ORTHO05D007318 3.7e-20 102.4 98 52.0
BcaB02g10322 Brassica carinata HOM05D005957 ORTHO05D007318 3.7e-20 102.4 103 50.5
A05p15090 Brassica napus HOM05D005957 ORTHO05D007318 4.9e-20 102.1 99 51.5
BcaC02g11133 Brassica carinata HOM05D005957 ORTHO05D007318 6.3e-20 101.7 102 51.0
CARHR123750 Cardamine hirsuta HOM05D005957 ORTHO05D007318 6.3e-20 101.7 99 51.5
Thhalv10017867m.g Eutrema salsugineum HOM05D005957 ORTHO05D007318 6.3e-20 101.7 99 50.5
C04p20120 Brassica napus HOM05D005957 ORTHO05D007318 8.3e-20 101.3 102 51.0
BolC4t23551H Brassica oleracea HOM05D005957 ORTHO05D007318 1.4e-19 100.5 102 50.0
DCAR_023195 Daucus carota HOM05D005957 ORTHO05D007318 1.4e-19 100.5 59 71.2
Sp4g12950 Schrenkiella parvula HOM05D005957 ORTHO05D007318 1.8e-19 100.1 99 49.5
Migut.D00827 Erythranthe guttata HOM05D005957 ORTHO05D007318 2.4e-19 99.8 93 54.8
THA.LOC104800785 Tarenaya hassleriana HOM05D005957 ORTHO05D007318 2.4e-19 99.8 186 37.6
Sc21g0004870 Simmondsia chinensis HOM05D005957 ORTHO05D007318 5.4e-19 98.6 112 43.8
BraA05t20430Z Brassica rapa HOM05D005957 ORTHO05D007318 1.2e-18 97.4 99 50.5
Thhalv10017852m.g Eutrema salsugineum HOM05D005957 ORTHO05D007318 5.9e-18 95.1 99 49.5
BcaB06g28364 Brassica carinata HOM05D005957 ORTHO05D007318 7.8e-18 94.7 99 47.5
Ah.15g095100 Amaranthus hybridus HOM05D005957 ORTHO05D007318 1.0e-17 94.4 94 50.0
BraA04t17844Z Brassica rapa HOM05D005957 ORTHO05D007318 1.0e-17 94.4 99 49.5
A04p23170 Brassica napus HOM05D005957 ORTHO05D007318 1.7e-17 93.6 99 49.5
Sp1g05630 Schrenkiella parvula HOM05D005957 ORTHO05D007318 1.7e-17 93.6 122 37.7
BcaC02g08022 Brassica carinata HOM05D005957 ORTHO05D007318 2.3e-17 93.2 99 49.5
C04p59320 Brassica napus HOM05D005957 ORTHO05D007318 2.3e-17 93.2 99 49.5
BolC4t27440H Brassica oleracea HOM05D005957 ORTHO05D007318 2.3e-17 93.2 99 49.5
Os07g0679100 Oryza sativa ssp. japonica HOM05D005957 ORTHO05D007318 1.5e-16 90.5 68 64.7
AL1G16950 Arabidopsis lyrata HOM05D005957 ORTHO05D007318 1.9e-16 90.1 88 46.6
Dinv12270 Davidia involucrata HOM05D005957 ORTHO05D007318 4.3e-16 89.0 88 50.0
Carub.0001s0622 Capsella rubella HOM05D005957 ORTHO05D007318 7.3e-16 88.2 84 46.4
AUR62007156 Chenopodium quinoa HOM05D003140 ORTHO05D003851 1.2e-15 87.4 117 41.9
CARHR006600 Cardamine hirsuta HOM05D005957 ORTHO05D007318 2.1e-15 86.7 119 39.5
AT1G06923 Arabidopsis thaliana HOM05D005957 ORTHO05D007318 2.8e-15 86.3 84 45.2
Thhalv10009633m.g Eutrema salsugineum HOM05D005957 ORTHO05D007318 2.8e-15 86.3 62 58.1
Zm00001eb350230 Zea mays HOM05D005957 ORTHO05D007318 2.8e-15 86.3 104 45.2
Os05g0328300 Oryza sativa ssp. japonica HOM05D005957 ORTHO05D007318 1.4e-14 84.0 67 56.7
BcaC07g42550 Brassica carinata HOM05D005957 ORTHO05D007318 1.2e-13 80.9 62 51.6
Zm00001eb330630 Zea mays HOM05D005957 ORTHO05D007318 2.0e-13 80.1 73 54.8
A09p66670 Brassica napus HOM05D005957 ORTHO05D007318 7.5e-13 78.2 61 52.5
BraA09t42007Z Brassica rapa HOM05D005957 ORTHO05D007318 7.5e-13 78.2 61 52.5
BcaC07g42036 Brassica carinata HOM05D005957 ORTHO05D007318 1.3e-12 77.4 65 49.2
BcaC07g42037 Brassica carinata HOM05D005957 ORTHO05D007318 1.3e-12 77.4 65 49.2
C08p50900 Brassica napus HOM05D005957 ORTHO05D007318 1.3e-12 77.4 65 49.2
BolC8t52618H Brassica oleracea HOM05D005957 ORTHO05D007318 1.3e-12 77.4 65 49.2
SEGI_34718 Sequoiadendron giganteum HOM05D005957 ORTHO05D007318 2.3e-09 66.6 60 46.7
SEGI_23498 Sequoiadendron giganteum HOM05D002997 ORTHO05D003021 4.0e-06 55.8 73 31.5


User provided reference genes

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