Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0681G095 Amborella trichopoda HOM05D004993 ORTHO05D008532 2.0e-189 665.6 341 100.0
MBI16_g25106_MAGBIO Magnolia biondii HOM05D004993 ORTHO05D008532 4.6e-125 451.8 292 75.7
Gorai.008G186000 Gossypium raimondii HOM05D004993 ORTHO05D008532 5.1e-116 421.8 266 73.7
Ciclev10031998m.g Citrus clementina HOM05D004993 ORTHO05D008532 2.5e-115 419.5 330 64.2
Cfa018620 Carpinus fangiana HOM05D004993 ORTHO05D008532 4.3e-115 418.7 328 65.2
Gohir.D12G173500 Gossypium hirsutum HOM05D004993 ORTHO05D008532 4.3e-115 418.7 266 72.9
Nn3g17764 Nelumbo nucifera HOM05D004993 ORTHO05D008532 4.3e-115 418.7 319 65.8
TAR371G0197 Trochodendron aralioides HOM05D004993 ORTHO05D008532 4.3e-115 418.7 264 75.4
Aqoxy3G03926 Aquilegia oxysepala HOM05D004993 ORTHO05D008532 5.6e-115 418.3 257 76.3
Gohir.A12G169600 Gossypium hirsutum HOM05D004993 ORTHO05D008532 5.6e-115 418.3 282 70.6
Gorai.008G185400 Gossypium raimondii HOM05D004993 ORTHO05D008532 5.6e-115 418.3 282 70.6
Gohir.D12G172900 Gossypium hirsutum HOM05D004993 ORTHO05D008532 1.3e-114 417.2 282 70.2
Thecc.02G359900 Theobroma cacao HOM05D004993 ORTHO05D008532 6.2e-114 414.8 266 72.9
PSO063G3032 Papaver somniferum HOM05D004993 ORTHO05D008532 8.1e-114 414.5 257 75.9
Gohir.A12G170200 Gossypium hirsutum HOM05D004993 ORTHO05D008532 1.4e-113 413.7 266 72.2
GSVIVG01011941001 Vitis vinifera HOM05D004993 ORTHO05D008532 4.0e-113 412.1 290 70.0
Prupe.1G306400 Prunus persica HOM05D004993 ORTHO05D008532 6.9e-113 411.4 326 67.2
Manes.14G098500 Manihot esculenta HOM05D004993 ORTHO05D008532 9.0e-113 411.0 318 65.4
Potri.008G117600 Populus trichocarpa HOM05D004993 ORTHO05D008532 2.6e-112 409.5 260 75.8
THA.LOC104808209 Tarenaya hassleriana HOM05D004993 ORTHO05D008532 2.6e-112 409.5 309 64.4
MSTRG.7682 Avicennia marina HOM05D004993 ORTHO05D008532 3.4e-112 409.1 317 65.0
TWI31G0395 Tripterygium wilfordii HOM05D004993 ORTHO05D008532 7.6e-112 407.9 320 63.8
Lalb_Chr17g0341941 Lupinus albus HOM05D004993 ORTHO05D008532 9.9e-112 407.5 292 65.8
Lj2g0001269 Lotus japonicus HOM05D004993 ORTHO05D008532 1.3e-111 407.1 290 66.6
CiPaw.16G003600 Carya illinoinensis HOM05D004993 ORTHO05D008532 3.8e-111 405.6 301 67.1
Glyma.02G098700 Glycine max HOM05D004993 ORTHO05D008532 3.8e-111 405.6 318 63.5
Hma1.2p1_0862F.1_g229950 Hydrangea macrophylla HOM05D004993 ORTHO05D008532 3.8e-111 405.6 264 73.5
Phvul.003G028100 Phaseolus vulgaris HOM05D004993 ORTHO05D008532 4.9e-111 405.2 290 66.9
Duzib251G0893 Durio zibethinus HOM05D004993 ORTHO05D008532 6.4e-111 404.8 300 66.0
FvH4_4g27971 Fragaria vesca HOM05D004993 ORTHO05D008532 3.2e-110 402.5 334 61.7
FAN07G2608 Fragaria x ananassa HOM05D004993 ORTHO05D008532 3.2e-110 402.5 334 61.4
MD16G1046900 Malus domestica HOM05D004993 ORTHO05D008532 3.2e-110 402.5 291 69.4
PGR102G1294 Punica granatum HOM05D004993 ORTHO05D008532 4.2e-110 402.1 257 75.5
VMungo1215G2957 Vigna mungo HOM05D004993 ORTHO05D008532 7.1e-110 401.4 312 63.5
AL1G43530 Arabidopsis lyrata HOM05D004993 ORTHO05D008532 9.3e-110 401.0 337 60.8
HPP92_005309 Vanilla planifolia HOM05D004993 ORTHO05D008532 1.2e-109 400.6 258 72.5
Cc11_g10510 Coffea canephora HOM05D004993 ORTHO05D008532 1.6e-109 400.2 327 63.6
COL.COLO4_07879 Corchorus olitorius HOM05D004993 ORTHO05D008532 1.6e-109 400.2 266 71.1
TPR.G38312 Trifolium pratense HOM05D004993 ORTHO05D008532 2.1e-109 399.8 333 60.1
Migut.O00833 Erythranthe guttata HOM05D004993 ORTHO05D008532 2.7e-109 399.4 287 66.2
RcHm_v2.0_Chr4g0435691 Rosa chinensis HOM05D004993 ORTHO05D008532 2.7e-109 399.4 326 62.0
AUR62002913 Chenopodium quinoa HOM05D004993 ORTHO05D008532 3.5e-109 399.1 308 65.3
Aa31LG6G5980 Aethionema arabicum HOM05D004993 ORTHO05D008532 4.6e-109 398.7 327 61.2
CSS0044433 Camellia sinensis var. sinensis HOM05D004993 ORTHO05D008532 4.6e-109 398.7 318 62.6
FAN17G0685 Fragaria x ananassa HOM05D004993 ORTHO05D008532 4.6e-109 398.7 300 65.0
Sp1g25580 Schrenkiella parvula HOM05D004993 ORTHO05D008532 7.9e-109 397.9 341 61.3
BraA08t34448Z Brassica rapa HOM05D004993 ORTHO05D008532 1.0e-108 397.5 339 61.7
AUR62035273 Chenopodium quinoa HOM05D004993 ORTHO05D008532 1.0e-108 397.5 258 72.5
Nitab4.5_0000582g0040 Nicotiana tabacum HOM05D004993 ORTHO05D008532 1.3e-108 397.1 341 59.8
Lj3A1018T65 Lonicera japonica HOM05D004993 ORTHO05D008532 2.3e-108 396.4 288 66.3
BcaC01g00125 Brassica carinata HOM05D004993 ORTHO05D008532 3.0e-108 396.0 340 60.9
C03p76040 Brassica napus HOM05D004993 ORTHO05D008532 3.0e-108 396.0 340 60.9
CANSAT64G2606 Cannabis sativa HOM05D004993 ORTHO05D008532 3.0e-108 396.0 303 65.0
CsaV3_5G034030 Cucumis sativus L. HOM05D004993 ORTHO05D008532 3.9e-108 395.6 321 62.9
RhsimUnG0136600 Rhododendron simsii HOM05D004993 ORTHO05D008532 3.9e-108 395.6 252 72.6
BolC3t19860H Brassica oleracea HOM05D004993 ORTHO05D008532 5.1e-108 395.2 340 60.9
AT1G29700 Arabidopsis thaliana HOM05D004993 ORTHO05D008532 6.6e-108 394.8 335 60.0
BcaB03g12171 Brassica carinata HOM05D004993 ORTHO05D008532 6.6e-108 394.8 329 62.3
Sc04g0006640 Simmondsia chinensis HOM05D004993 ORTHO05D008532 1.1e-107 394.0 337 62.0
CARHR029050 Cardamine hirsuta HOM05D004993 ORTHO05D008532 1.5e-107 393.7 337 60.5
CDE04G2310 Ceratophyllum demersum HOM05D004993 ORTHO05D008532 1.5e-107 393.7 259 70.7
MELO3C012219.2 Cucumis melo HOM05D004993 ORTHO05D008532 1.9e-107 393.3 321 62.6
Carub.0001s2791 Capsella rubella HOM05D004993 ORTHO05D008532 3.3e-107 392.5 336 61.9
Haze_17449 Corylus avellana HOM05D004993 ORTHO05D008532 4.3e-107 392.1 372 56.2
A08p24930 Brassica napus HOM05D004993 ORTHO05D008532 7.4e-107 391.3 339 60.2
arahy.Tifrunner.gnm1.ann1.5ZE4QE Arachis hypogaea HOM05D004993 ORTHO05D008532 2.1e-106 389.8 315 61.0
EL10Ac6g14467 Beta vulgaris HOM05D004993 ORTHO05D008532 2.8e-106 389.4 317 62.8
arahy.Tifrunner.gnm1.ann1.VJ59XU Arachis hypogaea HOM05D004993 ORTHO05D008532 8.1e-106 387.9 344 58.7
SalBow8G3546 Salvia bowleyana HOM05D004993 ORTHO05D008532 8.1e-106 387.9 307 62.5
Sed0024124 Sechium edule HOM05D004993 ORTHO05D008532 1.1e-105 387.5 322 62.4
Solyc03g111700.3 Solanum lycopersicum HOM05D004993 ORTHO05D008532 1.1e-105 387.5 258 71.7
Sopen03g030820 Solanum pennellii HOM05D004993 ORTHO05D008532 5.3e-105 385.2 258 70.5
HanXRQChr17g0567931 Helianthus annuus HOM05D004993 ORTHO05D008532 2.0e-104 383.3 347 56.2
Dinv16501 Davidia involucrata HOM05D004993 ORTHO05D008532 5.8e-104 381.7 299 64.2
CAN.G630.88 Capsicum annuum HOM05D004993 ORTHO05D008532 2.9e-103 379.4 351 58.7
Lsat_1_v5_gn_4_20101 Lactuca sativa HOM05D004993 ORTHO05D008532 2.9e-103 379.4 264 67.4
PGSC0003DMG402001731 Solanum tuberosum HOM05D004993 ORTHO05D008532 3.8e-103 379.0 257 70.0
unitig_8.g3446 Utricularia gibba HOM05D004993 ORTHO05D008532 1.4e-102 377.1 258 68.6
Atru.chr11.1340 Acer truncatum HOM05D004993 ORTHO05D008532 1.9e-102 376.7 240 75.0
ECA234G2629 Erigeron canadensis HOM05D004993 ORTHO05D008532 2.7e-101 372.9 264 66.7
SGA_v2.0_scaffold209G42027 Striga asiatica HOM05D004993 ORTHO05D008532 1.8e-100 370.2 362 54.4
vmacro01368 Vaccinium macrocarpon HOM05D004993 ORTHO05D008532 3.9e-100 369.0 353 55.0
Medtr5g054360 Medicago truncatula HOM05D004993 ORTHO05D008532 6.7e-100 368.2 234 72.6
Sabra08G0089200 Salix brachista HOM05D004993 ORTHO05D008532 1.5e-99 367.1 338 57.1
Eucgr.B03043 Eucalyptus grandis HOM05D004993 ORTHO05D008532 4.3e-99 365.5 302 62.3
QL01p044817 Quercus lobata HOM05D004993 ORTHO05D008532 5.6e-99 365.2 306 61.8
CSS0008970 Camellia sinensis var. sinensis HOM05D004993 ORTHO05D008532 1.3e-98 364.0 252 67.9
Peaxi162Scf00004g01611 Petunia axillaris HOM05D004993 ORTHO05D008532 2.8e-98 362.8 279 64.9
Hund05759 Selenicereus undatus HOM05D000924 ORTHO05D001209 1.0e-95 354.4 436 47.7
PSO782G1223 Papaver somniferum HOM05D004993 ORTHO05D008532 3.8e-95 352.4 257 67.7
Mapoly0053s0088 Marchantia polymorpha HOM05D004993 ORTHO05D008532 6.5e-95 351.7 266 62.0
SMO361G0287 Selaginella moellendorffii HOM05D004993 ORTHO05D008532 7.1e-94 348.2 259 61.8
Nitab4.5_0004719g0040 Nicotiana tabacum HOM05D004993 ORTHO05D008532 1.3e-92 344.0 229 71.6
Thhalv10009499m.g Eutrema salsugineum HOM05D004993 ORTHO05D008532 1.1e-91 340.9 341 55.7
Os12g0641300 Oryza sativa ssp. japonica HOM05D004993 ORTHO05D008532 5.9e-88 328.6 273 60.8
Pp3c15_25860 Physcomitrium patens HOM05D004993 ORTHO05D008532 3.2e-86 322.8 295 53.6
Zm00001eb133920 Zea mays HOM05D004993 ORTHO05D008532 1.1e-83 314.3 280 58.9
Ah.02g127080 Amaranthus hybridus HOM05D004993 ORTHO05D008532 2.8e-82 309.7 226 68.1
AagrBONN_evm.TU.Sc2ySwM_344.778 Anthoceros agrestis HOM05D004993 ORTHO05D008532 1.5e-80 303.9 240 59.6
MD13G1045600 Malus domestica HOM05D004993 ORTHO05D008532 3.3e-75 286.2 276 55.4
CiPaw.15G004200 Carya illinoinensis HOM05D004993 ORTHO05D008532 9.7e-75 284.6 298 53.7
Migut.L01091 Erythranthe guttata HOM05D004993 ORTHO05D008532 5.9e-64 248.8 159 69.2
Psat2g091800 Pisum sativum HOM05D004993 ORTHO05D008532 3.3e-59 233.0 143 72.0
Actinidia38387 Actinidia chinensis HOM05D004993 ORTHO05D008532 1.8e-52 210.7 150 66.0
CBR_g46806 Chara braunii HOM05D004993 ORTHO05D008532 4.0e-52 209.5 272 40.1
Hma1.2p1_0862F.1_g229960 Hydrangea macrophylla HOM05D004993 ORTHO05D008532 2.0e-51 207.2 163 63.8
Ca_20419_v3 Cicer arietinum L. HOM05D004993 ORTHO05D008532 7.0e-49 198.7 135 68.9
Cpa.g.c35723 Carica papaya HOM05D004993 ORTHO05D008532 5.9e-48 195.7 134 68.7
SEGI_28994 Sequoiadendron giganteum HOM05D004993 ORTHO05D008532 3.8e-47 193.0 136 64.7
ECA248G2500 Erigeron canadensis HOM05D004993 ORTHO05D008532 4.4e-43 179.5 214 45.8
Actinidia13671 Actinidia chinensis HOM05D004993 ORTHO05D008532 9.8e-35 151.8 97 72.2
MCO14G082 Micromonas commoda HOM05D004993 ORTHO05D008532 1.3e-31 141.4 277 34.3
Pp3c27_8380 Physcomitrium patens HOM05D004993 ORTHO05D008532 6.2e-29 132.5 257 33.5
Cre10.g442950 Chlamydomonas reinhardtii HOM05D004993 ORTHO05D008532 4.0e-28 129.8 269 29.4
SEGI_13194 Sequoiadendron giganteum HOM05D004993 ORTHO05D008532 6.0e-16 89.4 116 41.4
Migut.G01033 Erythranthe guttata HOM05D004993 ORTHO05D008532 2.3e-12 77.4 50 70.0
CARHR029040 Cardamine hirsuta HOM05D004993 ORTHO05D008532 8.9e-12 75.5 99 44.4


User provided reference genes

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