Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0681G086 Amborella trichopoda HOM05D006694 ORTHO05D008240 1.7e-70 269.2 135 100.0
ATR1128G031 Amborella trichopoda HOM05D006694 ORTHO05D008240 4.4e-47 191.4 133 74.4
ATR1128G092 Amborella trichopoda HOM05D006694 ORTHO05D008240 3.2e-45 185.3 115 77.4
ATR0737G153 Amborella trichopoda HOM05D006694 ORTHO05D008240 2.3e-35 152.5 125 64.8
ATR0737G136 Amborella trichopoda HOM05D006694 ORTHO05D008240 3.6e-25 118.6 92 64.1
ATR0712G084 Amborella trichopoda HOM05D014578 ORTHO05D008240 3.8e-22 108.6 76 71.1
ATR0697G204 Amborella trichopoda HOM05D006694 ORTHO05D008240 3.0e-19 99.0 103 52.4
CiPaw.14G112300 Carya illinoinensis HOM05D006694 ORTHO05D008240 2.6e-15 85.9 126 35.7
Haze_23854 Corylus avellana HOM05D006694 ORTHO05D008240 3.4e-15 85.5 127 38.6
Haze_23236 Corylus avellana HOM05D006694 ORTHO05D008240 5.8e-15 84.7 123 39.8
Hund21974 Selenicereus undatus HOM05D006179 ORTHO05D008240 5.8e-15 84.7 125 36.8
ClCG03G012530 Citrullus lanatus HOM05D006694 ORTHO05D008240 6.4e-14 81.3 132 34.8
Oeu043278.1 Olea europaea HOM05D006694 ORTHO05D008240 1.1e-13 80.5 127 34.6
TAR633G1767 Trochodendron aralioides HOM05D006694 ORTHO05D008240 1.4e-13 80.1 127 33.9
Aqoxy1G00470 Aquilegia oxysepala HOM05D006694 ORTHO05D008240 1.9e-13 79.7 126 32.5
CsaV3_1G043500 Cucumis sativus L. HOM05D006694 ORTHO05D008240 1.9e-13 79.7 124 36.3
CSS0033907 Camellia sinensis var. sinensis HOM05D006694 ORTHO05D008240 5.5e-13 78.2 126 34.1
AUR62006546 Chenopodium quinoa HOM05D006694 ORTHO05D008240 5.5e-13 78.2 135 30.4
Haze_21398 Corylus avellana HOM05D000162 ORTHO05D000090 9.3e-13 77.4 136 31.6
MELO3C015109.2 Cucumis melo HOM05D006694 ORTHO05D008240 9.3e-13 77.4 122 36.1
Sopen07g032820 Solanum pennellii HOM05D006694 ORTHO05D008240 9.3e-13 77.4 113 35.4
Sed0016136 Sechium edule HOM05D006694 ORTHO05D008240 1.6e-12 76.6 133 32.3
PGSC0003DMG400022317 Solanum tuberosum HOM05D006694 ORTHO05D008240 1.6e-12 76.6 129 34.1
QL01p017030 Quercus lobata HOM05D006694 ORTHO05D008240 2.7e-12 75.9 111 36.9
Solyc07g064625.1 Solanum lycopersicum HOM05D006694 ORTHO05D008240 3.5e-12 75.5 113 33.6
Hma1.2p1_1099F.1_g256830 Hydrangea macrophylla HOM05D006694 ORTHO05D008240 6.0e-12 74.7 111 34.2
Nitab4.5_0003488g0040 Nicotiana tabacum HOM05D006694 ORTHO05D008240 6.0e-12 74.7 125 34.4
Nn7g35871 Nelumbo nucifera HOM05D006694 ORTHO05D008240 7.9e-12 74.3 126 30.2
SalBow6G6606 Salvia bowleyana HOM05D006694 ORTHO05D008240 1.3e-11 73.6 128 34.4
FAN25G2919 Fragaria x ananassa HOM05D006694 ORTHO05D008240 1.8e-11 73.2 134 32.1
SalBow6G6418 Salvia bowleyana HOM05D006694 ORTHO05D008240 2.3e-11 72.8 129 34.1
TWI79G1258 Tripterygium wilfordii HOM05D006694 ORTHO05D008240 2.3e-11 72.8 122 32.8
CAN.G337.135 Capsicum annuum HOM05D006694 ORTHO05D008240 3.0e-11 72.4 113 33.6
FvH4_3g35120 Fragaria vesca HOM05D006694 ORTHO05D008240 3.0e-11 72.4 134 32.1
FAN11G2736 Fragaria x ananassa HOM05D006694 ORTHO05D008240 3.0e-11 72.4 134 32.1
FAN21G3540 Fragaria x ananassa HOM05D006694 ORTHO05D008240 5.1e-11 71.6 134 31.3
MD08G1215500 Malus domestica HOM05D006694 ORTHO05D008240 5.1e-11 71.6 134 31.3
SalBow5G3658 Salvia bowleyana HOM05D006694 ORTHO05D008240 5.1e-11 71.6 128 34.4
SalBow5G5172 Salvia bowleyana HOM05D006694 ORTHO05D008240 5.1e-11 71.6 128 34.4
MBI04_g37009_MAGBIO Magnolia biondii HOM05D006694 ORTHO05D008240 6.7e-11 71.2 76 43.4
Nitab4.5_0000730g0020 Nicotiana tabacum HOM05D006694 ORTHO05D008240 1.1e-10 70.5 123 32.5
Phvul.008G105900 Phaseolus vulgaris HOM05D006694 ORTHO05D008240 1.5e-10 70.1 137 33.6
HanXRQChr14g0447481 Helianthus annuus HOM05D006694 ORTHO05D008240 1.9e-10 69.7 123 33.3
Sc16g0011010 Simmondsia chinensis HOM05D006694 ORTHO05D008240 1.9e-10 69.7 121 30.6
VMungo1383G3557 Vigna mungo HOM05D006694 ORTHO05D008240 1.9e-10 69.7 137 33.6
ATR0730G050 Amborella trichopoda HOM05D006694 ORTHO05D008240 2.5e-10 69.3 47 68.1
EL10Ac4g10114 Beta vulgaris HOM05D006694 ORTHO05D008240 2.5e-10 69.3 90 35.6
Lalb_Chr10g0096081 Lupinus albus HOM05D006694 ORTHO05D008240 3.3e-10 68.9 128 30.5
PGR031G0070 Punica granatum HOM05D006694 ORTHO05D008240 4.3e-10 68.6 126 31.7
Cfa011326 Carpinus fangiana HOM05D006694 ORTHO05D008240 5.6e-10 68.2 123 34.1
Nitab4.5_0001500g0030 Nicotiana tabacum HOM05D006694 ORTHO05D008240 5.6e-10 68.2 123 31.7
BcaC07g41685 Brassica carinata HOM05D000162 ORTHO05D000090 7.4e-10 67.8 124 32.3
BolC8t52255H Brassica oleracea HOM05D000162 ORTHO05D000090 7.4e-10 67.8 124 32.3
Aa31LG6G11680 Aethionema arabicum HOM05D006694 ORTHO05D008240 1.3e-09 67.0 98 32.7
Aa31LG6G5340 Aethionema arabicum HOM05D006694 ORTHO05D008240 1.3e-09 67.0 98 32.7
Migut.D00664 Erythranthe guttata HOM05D006694 ORTHO05D008240 1.3e-09 67.0 125 34.4
Ah.06g194610 Amaranthus hybridus HOM05D006694 ORTHO05D008240 1.6e-09 66.6 111 33.3
FAN08G0107 Fragaria x ananassa HOM05D006694 ORTHO05D008240 2.1e-09 66.2 134 32.1
LjContig00485g0019324 Lotus japonicus HOM05D006694 ORTHO05D008240 2.1e-09 66.2 132 31.8
Dinv06480 Davidia involucrata HOM05D000162 ORTHO05D000090 2.8e-09 65.9 118 35.6
Medtr7g067460 Medicago truncatula HOM05D006694 ORTHO05D008240 3.7e-09 65.5 107 30.8
Ca_20213_v3 Cicer arietinum L. HOM05D006694 ORTHO05D008240 4.8e-09 65.1 114 28.9
Aa31LG8G12540 Aethionema arabicum HOM05D006694 ORTHO05D008240 6.2e-09 64.7 129 28.7
A09p62690 Brassica napus HOM05D000162 ORTHO05D000090 6.2e-09 64.7 128 29.7
Psat3g130440 Pisum sativum HOM05D006694 ORTHO05D008240 1.1e-08 63.9 115 29.6
THA.LOC104808474 Tarenaya hassleriana HOM05D000162 ORTHO05D000090 1.1e-08 63.9 141 34.0
Ca_07624_v3 Cicer arietinum L. HOM05D000278 ORTHO05D008240 1.4e-08 63.5 114 29.8
FvH4_5g33200 Fragaria vesca HOM05D006694 ORTHO05D008240 1.4e-08 63.5 130 32.3
FAN18G4320 Fragaria x ananassa HOM05D006694 ORTHO05D008240 1.4e-08 63.5 133 30.8
BcaC04g22688 Brassica carinata HOM05D000162 ORTHO05D000090 2.4e-08 62.8 115 33.9
A09p13820 Brassica napus HOM05D000162 ORTHO05D000090 2.4e-08 62.8 115 33.0
BolC9t54562H Brassica oleracea HOM05D000162 ORTHO05D000090 2.4e-08 62.8 115 33.9
BraA09t37034Z Brassica rapa HOM05D000162 ORTHO05D000090 2.4e-08 62.8 115 33.0
HPP92_025503 Vanilla planifolia HOM05D062792 ORTHO05D008240 2.4e-08 62.8 90 33.3
HPP92_025533 Vanilla planifolia HOM05D062792 ORTHO05D008240 2.4e-08 62.8 90 33.3
Actinidia06229 Actinidia chinensis HOM05D000162 ORTHO05D000090 3.1e-08 62.4 115 33.0
Manes.09G016633 Manihot esculenta HOM05D000162 ORTHO05D000090 3.1e-08 62.4 129 29.5
Aa31LG6G11690 Aethionema arabicum HOM05D006694 ORTHO05D008240 5.3e-08 61.6 96 29.2
Aa31LG6G5330 Aethionema arabicum HOM05D006694 ORTHO05D008240 5.3e-08 61.6 96 29.2
EL10Ac5g10449 Beta vulgaris HOM05D000162 ORTHO05D000090 6.9e-08 61.2 116 29.3
Eucgr.G03208 Eucalyptus grandis HOM05D006694 ORTHO05D008240 6.9e-08 61.2 82 36.6
Nn1g02624 Nelumbo nucifera HOM05D000162 ORTHO05D000090 6.9e-08 61.2 128 31.2
THA.LOC104809084 Tarenaya hassleriana HOM05D000162 ORTHO05D000090 6.9e-08 61.2 116 31.0
Nitab4.5_0000718g0300 Nicotiana tabacum HOM05D006694 ORTHO05D008240 9.0e-08 60.8 75 36.0
Prupe.1G547200 Prunus persica HOM05D006694 ORTHO05D008240 9.0e-08 60.8 79 38.0
Aqoxy4G01012 Aquilegia oxysepala HOM05D000162 ORTHO05D000090 1.2e-07 60.5 118 30.5
COL.COLO4_34076 Corchorus olitorius HOM05D000162 ORTHO05D000090 1.5e-07 60.1 114 32.5
C09p16530 Brassica napus HOM05D000162 ORTHO05D000090 2.0e-07 59.7 114 33.3
Eucgr.A00844 Eucalyptus grandis HOM05D000162 ORTHO05D000090 2.0e-07 59.7 114 29.8
LjContig00485g0005104 Lotus japonicus HOM05D006694 ORTHO05D008240 2.0e-07 59.7 113 32.7
Ah.06g194670 Amaranthus hybridus HOM05D006596 ORTHO05D008497 2.6e-07 59.3 136 30.1
Gorai.009G376400 Gossypium raimondii HOM05D000162 ORTHO05D000090 2.6e-07 59.3 110 30.0
C08p45770 Brassica napus HOM05D003784 ORTHO05D004345 3.4e-07 58.9 112 33.9
BolC8t52131H Brassica oleracea HOM05D003784 ORTHO05D004345 3.4e-07 58.9 112 33.9
QL04p064892 Quercus lobata HOM05D000162 ORTHO05D000090 3.4e-07 58.9 106 34.0
vmacro13799 Vaccinium macrocarpon HOM05D000162 ORTHO05D000090 3.4e-07 58.9 131 30.5
Eucgr.G00976 Eucalyptus grandis HOM05D006980 ORTHO05D008704 4.5e-07 58.5 122 27.9
THA.LOC104800448 Tarenaya hassleriana HOM05D006694 ORTHO05D008240 4.5e-07 58.5 123 32.5
TPR.G8137 Trifolium pratense HOM05D006694 ORTHO05D008240 5.8e-07 58.2 96 30.2
Manes.13G055801 Manihot esculenta HOM05D000162 ORTHO05D000090 7.6e-07 57.8 130 30.0
THA.LOC104809083 Tarenaya hassleriana HOM05D000162 ORTHO05D000090 7.6e-07 57.8 113 30.1
Ciclev10024138m.g Citrus clementina HOM05D000162 ORTHO05D000090 1.0e-06 57.4 125 27.2
Lsat_1_v5_gn_9_9621 Lactuca sativa HOM05D000162 ORTHO05D000090 1.0e-06 57.4 113 28.3
Potri.013G149800 Populus trichocarpa HOM05D000162 ORTHO05D000090 1.0e-06 57.4 116 33.6
Carub.0002s0151 Capsella rubella HOM05D000162 ORTHO05D000090 1.3e-06 57.0 118 31.4
Cc02_g34450 Coffea canephora HOM05D000162 ORTHO05D000090 1.3e-06 57.0 131 32.1
Eucgr.A00743 Eucalyptus grandis HOM05D000162 ORTHO05D000090 1.3e-06 57.0 126 27.8
Hma1.2p1_1276F.1_g272140 Hydrangea macrophylla HOM05D000162 ORTHO05D000090 1.3e-06 57.0 122 28.7
COL.COLO4_21653 Corchorus olitorius HOM05D000162 ORTHO05D000090 1.7e-06 56.6 114 30.7
Eucgr.A00829 Eucalyptus grandis HOM05D000162 ORTHO05D000090 1.7e-06 56.6 114 29.8
Prupe.6G094000 Prunus persica HOM05D000162 ORTHO05D000090 2.2e-06 56.2 116 30.2
Aa31sc233G40 Aethionema arabicum HOM05D006694 ORTHO05D008240 2.9e-06 55.8 92 30.4
Aa31sc233G60 Aethionema arabicum HOM05D006694 ORTHO05D008240 2.9e-06 55.8 92 30.4
Cpa.g.sc332.2 Carica papaya HOM05D007173 ORTHO05D009589 2.9e-06 55.8 126 28.6
Lj1g0012010 Lotus japonicus HOM05D000162 ORTHO05D000090 2.9e-06 55.8 111 33.3
MD15G1400000 Malus domestica HOM05D006694 ORTHO05D008240 2.9e-06 55.8 81 35.8
SalBow4G2488 Salvia bowleyana HOM05D000162 ORTHO05D000090 2.9e-06 55.8 100 30.0
AUR62006552 Chenopodium quinoa HOM05D006179 ORTHO05D008370 3.8e-06 55.5 127 29.9
COL.COLO4_09887 Corchorus olitorius HOM05D000162 ORTHO05D000090 3.8e-06 55.5 114 29.8
MD11G1115600 Malus domestica HOM05D000162 ORTHO05D000090 3.8e-06 55.5 131 32.1
Phvul.007G266200 Phaseolus vulgaris HOM05D006596 ORTHO05D008497 3.8e-06 55.5 133 29.3
QL04p064912 Quercus lobata HOM05D000162 ORTHO05D000090 3.8e-06 55.5 82 35.4
BolC8t52228H Brassica oleracea HOM05D000162 ORTHO05D000090 4.9e-06 55.1 111 31.5
Lalb_Chr01g0018371 Lupinus albus HOM05D007410 ORTHO05D009500 4.9e-06 55.1 122 32.0
Nn3g18307 Nelumbo nucifera HOM05D000162 ORTHO05D000090 4.9e-06 55.1 114 31.6
Aa31LG5G8930 Aethionema arabicum HOM05D006694 ORTHO05D008240 8.4e-06 54.3 96 28.1
Thhalv10006947m.g Eutrema salsugineum HOM05D006694 ORTHO05D008240 8.4e-06 54.3 128 28.1
FAN08G1232 Fragaria x ananassa HOM05D002453 ORTHO05D002107 8.4e-06 54.3 131 25.2
QL03p013111 Quercus lobata HOM05D000162 ORTHO05D000090 8.4e-06 54.3 130 28.5
SalBow3G2341 Salvia bowleyana HOM05D000162 ORTHO05D000090 8.4e-06 54.3 130 26.9
SalBow3G4441 Salvia bowleyana HOM05D000162 ORTHO05D000090 8.4e-06 54.3 130 26.9


User provided reference genes

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