Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0681G007 Amborella trichopoda HOM05D005816 ORTHO05D006915 1.1e-57 226.5 122 100.0
CSS0007623 Camellia sinensis var. sinensis HOM05D005816 ORTHO05D006915 3.0e-10 68.9 123 37.4
TAR629G1032 Trochodendron aralioides HOM05D005816 ORTHO05D006915 1.5e-09 66.6 123 40.7
Hma1.2p1_0862F.1_g229870 Hydrangea macrophylla HOM05D005816 ORTHO05D006915 1.9e-09 66.2 122 36.9
Prupe.5G216700 Prunus persica HOM05D005816 ORTHO05D006915 2.5e-09 65.9 118 38.1
Potri.012G059600 Populus trichocarpa HOM05D005816 ORTHO05D006915 4.3e-09 65.1 114 40.4
CiPaw.15G126000 Carya illinoinensis HOM05D005816 ORTHO05D006915 7.4e-09 64.3 124 41.1
Atru.chr9.746 Acer truncatum HOM05D005816 ORTHO05D006915 2.8e-08 62.4 32 87.5
Sed0000064 Sechium edule HOM05D005816 ORTHO05D006915 2.8e-08 62.4 113 37.2
AL2G33800 Arabidopsis lyrata HOM05D005816 ORTHO05D006915 6.2e-08 61.2 122 34.4
Cc11_g10680 Coffea canephora HOM05D005816 ORTHO05D006915 8.1e-08 60.8 123 35.0
COL.COLO4_22708 Corchorus olitorius HOM05D005816 ORTHO05D006915 8.1e-08 60.8 121 38.8
MBI16_g06255_MAGBIO Magnolia biondii HOM05D005816 ORTHO05D006915 8.1e-08 60.8 30 86.7
AT1G73965 Arabidopsis thaliana HOM05D005816 ORTHO05D006915 1.1e-07 60.5 121 35.5
MD06G1210600 Malus domestica HOM05D005816 ORTHO05D006915 1.1e-07 60.5 116 35.3
CiPaw.16G002600 Carya illinoinensis HOM05D005816 ORTHO05D006915 1.4e-07 60.1 116 31.9
Duzib205G0672 Durio zibethinus HOM05D005816 ORTHO05D006915 1.4e-07 60.1 120 41.7
Gohir.D07G042900 Gossypium hirsutum HOM05D005816 ORTHO05D006915 1.4e-07 60.1 118 33.9
Gorai.001G045900 Gossypium raimondii HOM05D005816 ORTHO05D006915 1.4e-07 60.1 118 33.9
MD14G1221300 Malus domestica HOM05D005816 ORTHO05D006915 1.4e-07 60.1 115 34.8
Duzib251G0462 Durio zibethinus HOM05D005816 ORTHO05D006915 1.8e-07 59.7 122 37.7
Glyma.05G013600 Glycine max HOM05D005816 ORTHO05D006915 1.8e-07 59.7 125 44.0
Gohir.A11G007200 Gossypium hirsutum HOM05D005816 ORTHO05D006915 3.1e-07 58.9 31 87.1
Gohir.D11G006300 Gossypium hirsutum HOM05D005816 ORTHO05D006915 3.1e-07 58.9 31 87.1
Gorai.007G007600 Gossypium raimondii HOM05D005816 ORTHO05D006915 3.1e-07 58.9 31 87.1
Nn4g23710 Nelumbo nucifera HOM05D005816 ORTHO05D006915 3.1e-07 58.9 121 47.1
Atru.chr11.1371 Acer truncatum HOM05D005816 ORTHO05D006915 4.0e-07 58.5 123 32.5
HanXRQChr16g0502081 Helianthus annuus HOM05D005816 ORTHO05D006915 4.0e-07 58.5 28 89.3
Lalb_Chr07g0178581 Lupinus albus HOM05D005816 ORTHO05D006915 4.0e-07 58.5 32 81.2
AL1G39130 Arabidopsis lyrata HOM05D007541 ORTHO05D009404 5.3e-07 58.2 127 33.1
QL01p001040 Quercus lobata HOM05D005816 ORTHO05D006915 5.3e-07 58.2 36 69.4
Ciclev10033717m.g Citrus clementina HOM05D005816 ORTHO05D006915 6.9e-07 57.8 124 30.6
Eucgr.G02356 Eucalyptus grandis HOM05D005816 ORTHO05D006915 6.9e-07 57.8 32 81.2
CiPaw.16G083700 Carya illinoinensis HOM05D005816 ORTHO05D006915 9.0e-07 57.4 122 41.8
MELO3C017284.2 Cucumis melo HOM05D005816 ORTHO05D006915 9.0e-07 57.4 28 89.3
Gohir.A07G038800 Gossypium hirsutum HOM05D005816 ORTHO05D006915 9.0e-07 57.4 118 32.2
PGR119G1376 Punica granatum HOM05D005816 ORTHO05D006915 9.0e-07 57.4 131 35.1
Thecc.03G027700 Theobroma cacao HOM05D005816 ORTHO05D006915 9.0e-07 57.4 118 36.4
BcaB05g24412 Brassica carinata HOM05D005816 ORTHO05D006915 1.2e-06 57.0 122 34.4
Manes.06G073000 Manihot esculenta HOM05D005816 ORTHO05D006915 1.2e-06 57.0 26 92.3
Carub.0002s2074 Capsella rubella HOM05D005816 ORTHO05D006915 1.5e-06 56.6 35 71.4
CiPaw.15G002700 Carya illinoinensis HOM05D005816 ORTHO05D006915 1.5e-06 56.6 126 32.5
DCAR_007184 Daucus carota HOM05D007541 ORTHO05D009404 1.5e-06 56.6 42 61.9
Manes.14G096700 Manihot esculenta HOM05D005816 ORTHO05D006915 1.5e-06 56.6 40 65.0
Potri.010G130400 Populus trichocarpa HOM05D005816 ORTHO05D006915 1.5e-06 56.6 130 33.8
SalBow8G0077 Salvia bowleyana HOM05D005816 ORTHO05D006915 1.5e-06 56.6 39 71.8
THA.LOC104821965 Tarenaya hassleriana HOM05D005816 ORTHO05D006915 1.5e-06 56.6 125 34.4
AL2G27750 Arabidopsis lyrata HOM05D005816 ORTHO05D006915 2.0e-06 56.2 123 35.0
AT1G68795 Arabidopsis thaliana HOM05D005816 ORTHO05D006915 2.0e-06 56.2 40 62.5
Thhalv10019343m.g Eutrema salsugineum HOM05D005816 ORTHO05D006915 2.0e-06 56.2 123 35.8
Sc11g0003040 Simmondsia chinensis HOM05D005816 ORTHO05D006915 2.0e-06 56.2 43 65.1
MELO3C005357.2 Cucumis melo HOM05D005816 ORTHO05D006915 2.6e-06 55.8 122 32.8
Duzib248G0754 Durio zibethinus HOM05D005816 ORTHO05D006915 2.6e-06 55.8 119 31.1
Thhalv10019753m.g Eutrema salsugineum HOM05D005816 ORTHO05D006915 2.6e-06 55.8 28 85.7
Gohir.A03G103500 Gossypium hirsutum HOM05D007541 ORTHO05D009404 2.6e-06 55.8 30 80.0
Gohir.D02G128700 Gossypium hirsutum HOM05D007541 ORTHO05D009404 2.6e-06 55.8 30 80.0
Gorai.005G144400 Gossypium raimondii HOM05D007541 ORTHO05D009404 2.6e-06 55.8 30 80.0
Sabra10G0122200 Salix brachista HOM05D007541 ORTHO05D009404 2.6e-06 55.8 80 38.8
Aa31LG4G4260 Aethionema arabicum HOM05D005816 ORTHO05D006915 3.4e-06 55.5 38 71.1
Carub.0002s1536 Capsella rubella HOM05D005816 ORTHO05D006915 3.4e-06 55.5 122 32.0
PSO017G0024 Papaver somniferum HOM05D005816 ORTHO05D006915 3.4e-06 55.5 25 96.0
SGA_v2.0_scaffold59G20629 Striga asiatica HOM05D005816 ORTHO05D006915 3.4e-06 55.5 36 69.4
BcaC08g46328 Brassica carinata HOM05D005816 ORTHO05D006915 4.5e-06 55.1 124 31.5
BolC6t39316H Brassica oleracea HOM05D005816 ORTHO05D006915 4.5e-06 55.1 124 31.5
CARHR067080 Cardamine hirsuta HOM05D005816 ORTHO05D006915 4.5e-06 55.1 123 33.3
CiPaw.05G127200 Carya illinoinensis HOM05D007541 ORTHO05D009404 4.5e-06 55.1 30 76.7
Glyma.17G121800 Glycine max HOM05D005816 ORTHO05D006915 4.5e-06 55.1 125 36.0
Oeu044626.1 Olea europaea HOM05D005816 ORTHO05D006915 4.5e-06 55.1 71 47.9
Prupe.1G304500 Prunus persica HOM05D005816 ORTHO05D006915 4.5e-06 55.1 133 31.6
A07p39820 Brassica napus HOM05D005816 ORTHO05D006915 5.8e-06 54.7 25 92.0
BolC6t39843H Brassica oleracea HOM05D005816 ORTHO05D006915 5.8e-06 54.7 25 92.0
BraA07t31528Z Brassica rapa HOM05D005816 ORTHO05D006915 5.8e-06 54.7 25 92.0
Manes.05G118800 Manihot esculenta HOM05D005816 ORTHO05D006915 5.8e-06 54.7 32 78.1
HanXRQChr05g0149681 Helianthus annuus HOM05D005816 ORTHO05D006915 7.6e-06 54.3 27 77.8
Lalb_Chr13g0302361 Lupinus albus HOM05D005816 ORTHO05D006915 7.6e-06 54.3 23 100.0
Phvul.003G177600 Phaseolus vulgaris HOM05D005816 ORTHO05D006915 7.6e-06 54.3 23 100.0
Potri.008G115600 Populus trichocarpa HOM05D005816 ORTHO05D006915 7.6e-06 54.3 23 100.0
Thecc.02G334900 Theobroma cacao HOM05D007541 ORTHO05D009404 7.6e-06 54.3 30 80.0
Thecc.02G362100 Theobroma cacao HOM05D005816 ORTHO05D006915 7.6e-06 54.3 23 100.0
Zm00001eb119950 Zea mays HOM05D034298 ORTHO05D006915 7.6e-06 54.3 43 58.1
Aqoxy3G00384 Aquilegia oxysepala HOM05D005816 ORTHO05D006915 1.0e-05 53.9 122 33.6
Aqoxy3G03898 Aquilegia oxysepala HOM05D005816 ORTHO05D006915 1.0e-05 53.9 43 62.8
AT1G26600 Arabidopsis thaliana HOM05D007541 ORTHO05D009404 1.0e-05 53.9 88 37.5
BcaC08g46825 Brassica carinata HOM05D005816 ORTHO05D006915 1.0e-05 53.9 38 63.2
COL.COLO4_07860 Corchorus olitorius HOM05D005816 ORTHO05D006915 1.0e-05 53.9 121 30.6
Duzib248G1062 Durio zibethinus HOM05D007541 ORTHO05D009404 1.0e-05 53.9 82 43.9
Migut.E00293 Erythranthe guttata HOM05D005816 ORTHO05D006915 1.0e-05 53.9 38 63.2
Migut.L01100 Erythranthe guttata HOM05D005816 ORTHO05D006915 1.0e-05 53.9 30 76.7
Gohir.A03G097050 Gossypium hirsutum HOM05D005816 ORTHO05D006915 1.0e-05 53.9 30 83.3
Gohir.D02G116175 Gossypium hirsutum HOM05D005816 ORTHO05D006915 1.0e-05 53.9 30 83.3
Gorai.013G079400 Gossypium raimondii HOM05D005816 ORTHO05D006915 1.0e-05 53.9 123 31.7
Nn3g17700 Nelumbo nucifera HOM05D005816 ORTHO05D006915 1.0e-05 53.9 129 32.6
Sabra08G0087500 Salix brachista HOM05D005816 ORTHO05D006915 1.0e-05 53.9 22 100.0


User provided reference genes

Program Settings