Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0680G428 Amborella trichopoda HOM05D003626 ORTHO05D004255 0.0e+00 1400.6 818 100.0
TAR636G1367 Trochodendron aralioides HOM05D003626 ORTHO05D004255 9.3e-140 501.9 839 43.0
Nn1g01542 Nelumbo nucifera HOM05D003626 ORTHO05D004255 2.3e-138 497.3 885 40.7
TAR629G0048 Trochodendron aralioides HOM05D003626 ORTHO05D004255 2.3e-130 470.7 913 39.1
Rhsim03G0188200 Rhododendron simsii HOM05D003626 ORTHO05D004255 2.9e-117 427.2 885 37.2
vmacro06655 Vaccinium macrocarpon HOM05D003626 ORTHO05D004255 1.4e-116 424.9 902 36.7
HPP92_001476 Vanilla planifolia HOM05D003626 ORTHO05D004255 5.5e-116 422.9 411 57.7
Aqoxy7G00296 Aquilegia oxysepala HOM05D003626 ORTHO05D004255 2.7e-115 420.6 899 37.2
Nn6g33408 Nelumbo nucifera HOM05D003626 ORTHO05D004255 2.7e-115 420.6 919 36.8
GSVIVG01028908001 Vitis vinifera HOM05D003626 ORTHO05D004255 2.8e-112 410.6 879 37.1
Lj1C1001T6 Lonicera japonica HOM05D003626 ORTHO05D004255 3.4e-110 403.7 905 34.9
Cpa.g.sc107.76 Carica papaya HOM05D003626 ORTHO05D004255 7.2e-108 396.0 918 34.9
Dinv28414 Davidia involucrata HOM05D003626 ORTHO05D004255 7.2e-108 396.0 542 47.0
DCAR_020260 Daucus carota HOM05D003626 ORTHO05D004255 9.4e-108 395.6 543 45.3
Manes.06G149800 Manihot esculenta HOM05D003626 ORTHO05D004255 3.6e-107 393.7 922 36.2
Prupe.2G297500 Prunus persica HOM05D003626 ORTHO05D004255 7.9e-107 392.5 910 36.7
Actinidia25889 Actinidia chinensis HOM05D003626 ORTHO05D000962 3.3e-105 387.1 881 35.3
SEGI_20458 Sequoiadendron giganteum HOM05D003626 ORTHO05D004255 8.2e-104 382.5 419 53.5
PSO478G3353 Papaver somniferum HOM05D003626 ORTHO05D004255 2.6e-102 377.5 883 35.2
RcHm_v2.0_Chr1g0377821 Rosa chinensis HOM05D003626 ORTHO05D004255 1.0e-101 375.6 903 36.1
arahy.Tifrunner.gnm1.ann1.DJI5YQ Arachis hypogaea HOM05D003626 ORTHO05D004255 2.2e-101 374.4 873 34.4
Manes.14G024700 Manihot esculenta HOM05D003626 ORTHO05D004255 2.9e-101 374.0 541 45.3
HanXRQChr14g0462361 Helianthus annuus HOM05D003626 ORTHO05D004255 5.0e-101 373.2 389 52.4
Gorai.004G117900 Gossypium raimondii HOM05D003626 ORTHO05D004255 1.4e-100 371.7 396 53.5
Thecc.03G180000 Theobroma cacao HOM05D003626 ORTHO05D004255 1.9e-100 371.3 383 53.3
EL10Ac3g05599 Beta vulgaris HOM05D003626 ORTHO05D004255 2.5e-100 370.9 879 36.4
Hma1.2p1_0227F.1_g095920 Hydrangea macrophylla HOM05D003626 ORTHO05D004255 2.5e-100 370.9 882 35.6
Lsat_1_v5_gn_9_55160 Lactuca sativa HOM05D003626 ORTHO05D004255 7.2e-100 369.4 410 52.7
Duzib205G1576 Durio zibethinus HOM05D003626 ORTHO05D004255 9.4e-100 369.0 362 56.4
Gohir.D08G110300 Gossypium hirsutum HOM05D003626 ORTHO05D004255 9.4e-100 369.0 361 56.2
arahy.Tifrunner.gnm1.ann1.TX8CZR Arachis hypogaea HOM05D003626 ORTHO05D004255 1.6e-99 368.2 871 34.2
MD07G1273500 Malus domestica HOM05D003626 ORTHO05D004255 2.1e-99 367.9 880 35.0
Gohir.A08G098700 Gossypium hirsutum HOM05D003626 ORTHO05D004255 2.7e-99 367.5 361 56.2
PSO782G4415 Papaver somniferum HOM05D003626 ORTHO05D004255 2.7e-99 367.5 883 34.0
Duzib068G0520 Durio zibethinus HOM05D003626 ORTHO05D004255 8.8e-98 362.5 369 53.9
Gorai.008G275600 Gossypium raimondii HOM05D003626 ORTHO05D004255 8.8e-98 362.5 371 54.2
Phvul.007G072400 Phaseolus vulgaris HOM05D003626 ORTHO05D004255 1.1e-97 362.1 421 50.4
Potri.015G146300 Populus trichocarpa HOM05D003626 ORTHO05D004255 3.3e-97 360.5 859 35.3
MELO3C006924.2 Cucumis melo HOM05D003626 ORTHO05D004255 7.4e-97 359.4 542 43.4
Sed0000543 Sechium edule HOM05D003626 ORTHO05D004255 1.3e-96 358.6 917 33.3
CsaV3_3G017260 Cucumis sativus L. HOM05D003626 ORTHO05D004255 1.7e-96 358.2 542 43.0
VMungo0720G1546 Vigna mungo HOM05D003626 ORTHO05D004255 1.7e-96 358.2 421 49.6
Glyma.10G233400 Glycine max HOM05D003626 ORTHO05D004255 2.8e-96 357.5 537 43.9
Gohir.A12G256000 Gossypium hirsutum HOM05D003626 ORTHO05D004255 2.8e-96 357.5 432 49.8
TWI23G0117 Tripterygium wilfordii HOM05D003626 ORTHO05D004255 4.8e-96 356.7 887 34.2
TWI39G1025 Tripterygium wilfordii HOM05D003626 ORTHO05D004255 8.2e-96 355.9 896 34.9
Gohir.D12G257400 Gossypium hirsutum HOM05D003626 ORTHO05D004255 1.1e-95 355.5 350 56.0
Duzib084G0771 Durio zibethinus HOM05D003626 ORTHO05D004255 2.4e-95 354.4 415 50.4
Psat6g197120 Pisum sativum HOM05D003626 ORTHO05D004255 5.3e-95 353.2 883 33.4
FAN03G0953 Fragaria x ananassa HOM05D003626 ORTHO05D004255 4.5e-94 350.1 866 35.5
arahy.Tifrunner.gnm1.ann1.26FV7C Arachis hypogaea HOM05D003626 ORTHO05D004255 5.0e-93 346.7 349 53.9
arahy.Tifrunner.gnm1.ann1.7Y9ZSE Arachis hypogaea HOM05D003626 ORTHO05D004255 5.0e-93 346.7 349 53.9
Cfa016262 Carpinus fangiana HOM05D003626 ORTHO05D004255 6.5e-93 346.3 910 33.2
Oeu004107.1 Olea europaea HOM05D003626 ORTHO05D004255 6.5e-93 346.3 494 45.5
AUR62021157 Chenopodium quinoa HOM05D003626 ORTHO05D004255 2.5e-92 344.4 353 54.7
Sabra15G0155500 Salix brachista HOM05D003626 ORTHO05D004255 4.2e-92 343.6 866 36.7
Nitab4.5_0001951g0040 Nicotiana tabacum HOM05D003626 ORTHO05D004255 7.2e-92 342.8 489 42.7
Ah.07g206910 Amaranthus hybridus HOM05D003626 ORTHO05D004255 1.6e-91 341.7 409 50.6
Medtr1g100810 Medicago truncatula HOM05D003626 ORTHO05D004255 1.6e-91 341.7 425 48.0
MD01G1205100 Malus domestica HOM05D003626 ORTHO05D004255 2.1e-91 341.3 861 35.0
Lalb_Chr03g0034731 Lupinus albus HOM05D003626 ORTHO05D004255 2.7e-91 340.9 502 45.4
Nitab4.5_0000080g0130 Nicotiana tabacum HOM05D003626 ORTHO05D004255 4.7e-91 340.1 868 32.5
TAR375G0013 Trochodendron aralioides HOM05D003626 ORTHO05D004255 1.0e-90 339.0 331 59.2
TPR.G26995 Trifolium pratense HOM05D003626 ORTHO05D004255 2.3e-90 337.8 456 44.7
Potri.012G143200 Populus trichocarpa HOM05D003626 ORTHO05D004255 3.9e-90 337.0 857 33.6
FvH4_7g29860 Fragaria vesca HOM05D003626 ORTHO05D004255 5.2e-90 336.7 867 34.6
Glyma.20G161000 Glycine max HOM05D003626 ORTHO05D004255 4.4e-89 333.6 540 41.7
Lalb_Chr02g0141141 Lupinus albus HOM05D003626 ORTHO05D004255 2.2e-88 331.3 423 47.3
Dinv35227 Davidia involucrata HOM05D003626 ORTHO05D004255 2.8e-88 330.9 247 70.0
MSTRG.27103 Avicennia marina HOM05D003626 ORTHO05D004255 1.1e-87 328.9 536 40.9
DCAR_029574 Daucus carota HOM05D003626 ORTHO05D004255 4.1e-87 327.0 357 50.7
Oeu061653.1 Olea europaea HOM05D003626 ORTHO05D004255 4.1e-87 327.0 425 46.8
Atru.chr1.420 Acer truncatum HOM05D003626 ORTHO05D004255 7.0e-87 326.2 889 33.1
CDE06G1616 Ceratophyllum demersum HOM05D003626 ORTHO05D004255 9.1e-87 325.9 305 57.7
CANSAT21G2257 Cannabis sativa HOM05D003626 ORTHO05D004255 1.2e-86 325.5 815 33.6
Glyma.16G181700 Glycine max HOM05D003626 ORTHO05D004255 1.6e-86 325.1 849 33.1
Lalb_Chr19g0130741 Lupinus albus HOM05D003626 ORTHO05D004255 1.6e-86 325.1 486 44.2
Peaxi162Scf00444g00425 Petunia axillaris HOM05D003626 ORTHO05D004255 2.0e-86 324.7 862 32.3
CAN.G1175.16 Capsicum annuum HOM05D003626 ORTHO05D004255 7.7e-86 322.8 429 45.7
ECA233G2749 Erigeron canadensis HOM05D003626 ORTHO05D004255 7.7e-86 322.8 373 50.7
Ciclev10006582m.g Citrus clementina HOM05D003626 ORTHO05D004255 1.3e-85 322.0 363 51.2
PGSC0003DMG400015791 Solanum tuberosum HOM05D003626 ORTHO05D004255 5.0e-85 320.1 861 32.9
SalBow4G0890 Salvia bowleyana HOM05D003626 ORTHO05D004255 6.5e-85 319.7 534 40.3
ECA238G3668 Erigeron canadensis HOM05D003626 ORTHO05D004255 8.5e-85 319.3 412 46.1
Cc02_g02700 Coffea canephora HOM05D003626 ORTHO05D004255 1.1e-84 318.9 534 40.6
AUR62015951 Chenopodium quinoa HOM05D003626 ORTHO05D004255 2.5e-84 317.8 943 32.8
TWI14G0197 Tripterygium wilfordii HOM05D003626 ORTHO05D004255 4.2e-84 317.0 719 36.4
CiPaw.05G264100 Carya illinoinensis HOM05D003626 ORTHO05D004255 1.6e-83 315.1 502 42.6
Nitab4.5_0004439g0040 Nicotiana tabacum HOM05D003626 ORTHO05D004255 6.1e-83 313.2 852 32.2
Ca_10741_v3 Cicer arietinum L. HOM05D003626 ORTHO05D004255 4.0e-82 310.5 392 45.9
Lj2g0008392 Lotus japonicus HOM05D003626 ORTHO05D004255 4.0e-82 310.5 372 48.4
Solyc03g025440.3 Solanum lycopersicum HOM05D003626 ORTHO05D004255 4.0e-82 310.5 429 45.5
Sopen03g004280 Solanum pennellii HOM05D003626 ORTHO05D004255 5.2e-82 310.1 882 31.6
ClCG05G008170 Citrullus lanatus HOM05D003626 ORTHO05D004255 2.0e-81 308.1 374 47.6
PGR042G2663 Punica granatum HOM05D003626 ORTHO05D004255 2.0e-81 308.1 529 39.7
Mapoly0003s0245 Marchantia polymorpha HOM05D003626 ORTHO05D004255 5.7e-81 306.6 441 42.4
SGA_v2.0_scaffold60G21078 Striga asiatica HOM05D003626 ORTHO05D004255 5.7e-81 306.6 385 47.5
COL.COLO4_28044 Corchorus olitorius HOM05D003626 ORTHO05D004255 7.5e-81 306.2 426 46.0
FAN10G2476 Fragaria x ananassa HOM05D003626 ORTHO05D004255 1.3e-80 305.4 868 34.0
FAN10G0313 Fragaria x ananassa HOM05D003626 ORTHO05D004255 2.2e-80 304.7 850 33.5
Hund04768 Selenicereus undatus HOM05D003626 ORTHO05D004255 2.8e-80 304.3 841 32.8
Zm00001eb095880 Zea mays HOM05D003626 ORTHO05D004255 4.8e-80 303.5 291 57.7
Eucgr.L00411 Eucalyptus grandis HOM05D003626 ORTHO05D004255 1.4e-79 302.0 383 46.5
Sc19g0001390 Simmondsia chinensis HOM05D003626 ORTHO05D004255 1.4e-79 302.0 319 56.7
Sopen06g011810 Solanum pennellii HOM05D003626 ORTHO05D004255 1.4e-79 302.0 422 43.8
FAN01G0376 Fragaria x ananassa HOM05D003626 ORTHO05D004255 1.8e-79 301.6 892 33.3
FAN06G2167 Fragaria x ananassa HOM05D003626 ORTHO05D004255 1.8e-79 301.6 521 42.0
Solyc06g036060.4 Solanum lycopersicum HOM05D003626 ORTHO05D004255 3.1e-79 300.8 422 43.1
MSTRG.82 Avicennia marina HOM05D003626 ORTHO05D004255 9.1e-79 299.3 456 43.0
Phvul.004G113400 Phaseolus vulgaris HOM05D003626 ORTHO05D004255 2.0e-78 298.1 861 30.2
TPR.G8172 Trifolium pratense HOM05D003626 ORTHO05D004255 3.5e-78 297.4 385 46.0
Lj5g0006318 Lotus japonicus HOM05D003626 ORTHO05D004255 4.5e-78 297.0 406 45.1
FAN03G3125 Fragaria x ananassa HOM05D003626 ORTHO05D004255 1.3e-77 295.4 862 33.2
Lalb_Chr06g0161221 Lupinus albus HOM05D003626 ORTHO05D004255 3.2e-76 290.8 391 44.2
Migut.F01102 Erythranthe guttata HOM05D003626 ORTHO05D004255 5.5e-76 290.0 449 42.8
THA.LOC104825103 Tarenaya hassleriana HOM05D003626 ORTHO05D004255 9.4e-76 289.3 352 46.3
C07p54460 Brassica napus HOM05D003626 ORTHO05D004255 4.7e-75 287.0 344 47.4
THA.LOC104811971 Tarenaya hassleriana HOM05D003626 ORTHO05D004255 8.0e-75 286.2 352 45.5
A03p56130 Brassica napus HOM05D003626 ORTHO05D004255 4.0e-74 283.9 451 41.2
Os09g0570200 Oryza sativa ssp. japonica HOM05D003626 ORTHO05D004255 6.8e-74 283.1 327 49.8
SMO347G0135 Selaginella moellendorffii HOM05D003626 ORTHO05D004255 8.8e-74 282.7 371 45.8
Aa31LG3G8800 Aethionema arabicum HOM05D003626 ORTHO05D004255 2.0e-73 281.6 328 47.0
Peaxi162Scf00848g00116 Petunia axillaris HOM05D003626 ORTHO05D004255 2.0e-73 281.6 242 60.3
BolC7t45931H Brassica oleracea HOM05D003626 ORTHO05D004255 9.8e-73 279.3 342 46.5
Carub.0007s1537 Capsella rubella HOM05D003626 ORTHO05D004255 2.2e-72 278.1 331 46.2
Nitab4.5_0000084g0130 Nicotiana tabacum HOM05D003626 ORTHO05D004255 2.2e-72 278.1 827 31.2
BcaC06g32796 Brassica carinata HOM05D003626 ORTHO05D004255 2.8e-72 277.7 332 46.7
Thhalv10024755m.g Eutrema salsugineum HOM05D003626 ORTHO05D004255 2.8e-72 277.7 328 46.3
Sp7g23640 Schrenkiella parvula HOM05D003626 ORTHO05D004255 3.7e-72 277.3 343 44.9
Haze_00014 Corylus avellana HOM05D003626 ORTHO05D004255 4.8e-72 276.9 929 31.1
Psat0s4127g0040 Pisum sativum HOM05D003626 ORTHO05D004255 6.3e-72 276.6 457 40.9
C01p21150 Brassica napus HOM05D003626 ORTHO05D004255 8.3e-72 276.2 342 46.2
PGR142G2556 Punica granatum HOM05D003626 ORTHO05D004255 8.3e-72 276.2 323 49.5
BraA03t14686Z Brassica rapa HOM05D003626 ORTHO05D004255 1.1e-71 275.8 453 40.4
AL7G27480 Arabidopsis lyrata HOM05D003626 ORTHO05D004255 2.4e-71 274.6 328 46.3
AT4G25610 Arabidopsis thaliana HOM05D003626 ORTHO05D004255 1.6e-70 271.9 328 46.0
Eucgr.A02765 Eucalyptus grandis HOM05D003626 ORTHO05D004255 4.5e-70 270.4 288 54.5
A01p16870 Brassica napus HOM05D003626 ORTHO05D004255 2.3e-69 268.1 342 45.9
Medtr6g053660 Medicago truncatula HOM05D003626 ORTHO05D004255 2.3e-69 268.1 338 45.3
Sabra12G0107600 Salix brachista HOM05D003626 ORTHO05D004255 3.8e-69 267.3 533 37.9
CARHR233030 Cardamine hirsuta HOM05D003626 ORTHO05D004255 6.6e-69 266.5 328 46.0
VMungo0464G2114 Vigna mungo HOM05D003626 ORTHO05D002946 6.6e-69 266.5 231 60.2
BcaC09g50754 Brassica carinata HOM05D003626 ORTHO05D004255 7.2e-68 263.1 328 45.1
BcaNung03703 Brassica carinata HOM05D003626 ORTHO05D004255 1.2e-67 262.3 328 44.2
unitig_0.g459 Utricularia gibba HOM05D003626 ORTHO05D004255 1.3e-64 252.3 272 53.3
SEGI_33334 Sequoiadendron giganteum HOM05D003626 ORTHO05D004255 1.4e-63 248.8 259 54.1
unitig_22.g5223 Utricularia gibba HOM05D003626 ORTHO05D004255 1.8e-63 248.4 355 42.3
Sed0014313 Sechium edule HOM05D003626 ORTHO05D004255 2.0e-62 245.0 892 29.1
CDE02G1538 Ceratophyllum demersum HOM05D003626 ORTHO05D004255 3.5e-62 244.2 848 29.5
Migut.F00325 Erythranthe guttata HOM05D003626 ORTHO05D004255 1.7e-61 241.9 536 36.4
Eucgr.E00978 Eucalyptus grandis HOM05D003626 ORTHO05D004255 2.3e-61 241.5 383 41.0
Sc13g0008850 Simmondsia chinensis HOM05D003626 ORTHO05D004255 4.3e-60 237.3 261 50.6
CSS0037833 Camellia sinensis var. sinensis HOM05D003626 ORTHO05D004255 6.8e-50 203.4 142 71.1
Pp3c10_4090 Physcomitrium patens HOM05D003626 ORTHO05D004255 4.1e-47 194.1 443 36.1
FAN06G1666 Fragaria x ananassa HOM05D003626 ORTHO05D004255 2.3e-45 188.3 369 37.7
HPP92_011473 Vanilla planifolia HOM05D003626 ORTHO05D004255 1.6e-43 182.2 214 51.9
Zm00001eb224460 Zea mays HOM05D003626 ORTHO05D004255 5.4e-39 167.2 145 59.3
CSS0041965 Camellia sinensis var. sinensis HOM05D003626 ORTHO05D004255 6.0e-38 163.7 227 44.9
MBI18_g29423_MAGBIO Magnolia biondii HOM05D003626 ORTHO05D004255 3.8e-32 144.4 142 56.3
SMO356G0700 Selaginella moellendorffii HOM05D003626 ORTHO05D004255 9.2e-31 139.8 256 36.3
SEGI_03018 Sequoiadendron giganteum HOM05D003626 ORTHO05D004255 3.9e-29 134.4 165 50.9
AagrBONN_evm.TU.Sc2ySwM_344.1743 Anthoceros agrestis HOM05D003626 ORTHO05D004255 5.1e-29 134.0 466 30.0
TAR375G0355 Trochodendron aralioides HOM05D003626 ORTHO05D004255 6.6e-29 133.7 124 56.5
ATR0672G001 Amborella trichopoda HOM05D003626 ORTHO05D004255 1.9e-28 132.1 103 96.1
Glyma.09G136202 Glycine max HOM05D003626 ORTHO05D004255 1.1e-23 116.3 85 72.9
Lalb_Chr21g0305131 Lupinus albus HOM05D003626 ORTHO05D004255 3.8e-16 91.3 208 39.4
TAR636G0984 Trochodendron aralioides HOM05D003626 ORTHO05D004255 1.5e-12 79.3 56 71.4
MBI17_g24687_MAGBIO Magnolia biondii HOM05D003626 ORTHO05D004255 1.9e-12 79.0 556 25.0
CSS0005394 Camellia sinensis var. sinensis HOM05D003626 ORTHO05D004255 4.3e-12 77.8 230 31.7
HPP92_028446 Vanilla planifolia HOM05D003626 ORTHO05D004255 5.6e-12 77.4 116 38.8
HPP92_001477 Vanilla planifolia HOM05D003626 ORTHO05D004255 2.1e-11 75.5 161 35.4
Pp3c10_4110 Physcomitrium patens HOM05D003626 ORTHO05D004255 3.1e-10 71.6 174 36.8
ECA233G5443 Erigeron canadensis HOM05D003626 ORTHO05D004255 6.9e-10 70.5 68 51.5
TAR375G0736 Trochodendron aralioides HOM05D003626 ORTHO05D004255 2.0e-09 68.9 112 40.2
HPP92_001484 Vanilla planifolia HOM05D003626 ORTHO05D004255 2.0e-09 68.9 76 51.3
AagrBONN_evm.TU.Sc2ySwM_362.2615 Anthoceros agrestis HOM05D003626 ORTHO05D004255 4.5e-09 67.8 192 30.7


User provided reference genes

Program Settings