Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0680G419 Amborella trichopoda HOM05D007534 ORTHO05D009540 2.1e-67 258.8 126 100.0
PGR004G0787 Punica granatum HOM05D007534 ORTHO05D009540 8.6e-29 130.6 66 92.4
ATR0723G005 Amborella trichopoda HOM05D007534 ORTHO05D009540 1.1e-28 130.2 65 96.9
Eucgr.A01668 Eucalyptus grandis HOM05D007534 ORTHO05D009540 4.3e-28 128.3 65 92.3
TPR.G11259 Trifolium pratense HOM05D007534 ORTHO05D009540 4.3e-28 128.3 69 85.5
Ciclev10012507m.g Citrus clementina HOM05D007534 ORTHO05D009540 7.3e-28 127.5 65 90.8
Thecc.05G068400 Theobroma cacao HOM05D007534 ORTHO05D009540 9.6e-28 127.1 65 90.8
TWI53G0173 Tripterygium wilfordii HOM05D007534 ORTHO05D009540 9.6e-28 127.1 65 90.8
Gohir.D01G204300 Gossypium hirsutum HOM05D007534 ORTHO05D009540 1.2e-27 126.7 65 89.2
Gorai.002G246500 Gossypium raimondii HOM05D007534 ORTHO05D009540 1.2e-27 126.7 65 89.2
arahy.Tifrunner.gnm1.ann1.39JB5J Arachis hypogaea HOM05D007534 ORTHO05D009540 2.8e-27 125.6 65 89.2
arahy.Tifrunner.gnm1.ann1.C885SU Arachis hypogaea HOM05D007534 ORTHO05D009540 2.8e-27 125.6 65 89.2
MSTRG.19184 Avicennia marina HOM05D007534 ORTHO05D009540 2.8e-27 125.6 65 89.2
Cpa.g.sc102.24 Carica papaya HOM05D007534 ORTHO05D009540 2.8e-27 125.6 65 89.2
Duzib093G0985 Durio zibethinus HOM05D007534 ORTHO05D009540 2.8e-27 125.6 65 89.2
THA.LOC104807064 Tarenaya hassleriana HOM05D007534 ORTHO05D009540 2.8e-27 125.6 65 89.2
Atru.chr8.1788 Acer truncatum HOM05D007534 ORTHO05D009540 3.6e-27 125.2 65 87.7
ClCG04G009370 Citrullus lanatus HOM05D007534 ORTHO05D009540 3.6e-27 125.2 65 89.2
BcaB02g09324 Brassica carinata HOM05D007534 ORTHO05D009540 6.2e-27 124.4 65 89.2
BcaC02g11812 Brassica carinata HOM05D007534 ORTHO05D009540 6.2e-27 124.4 65 89.2
A05p08980 Brassica napus HOM05D007534 ORTHO05D009540 6.2e-27 124.4 65 89.2
C04p11090 Brassica napus HOM05D007534 ORTHO05D009540 6.2e-27 124.4 65 89.2
BolC4t22757H Brassica oleracea HOM05D007534 ORTHO05D009540 6.2e-27 124.4 65 89.2
BraA05t19860Z Brassica rapa HOM05D007534 ORTHO05D009540 6.2e-27 124.4 65 89.2
CiPaw.10G129000 Carya illinoinensis HOM05D007534 ORTHO05D009540 6.2e-27 124.4 65 87.7
Ca_28252_v3 Cicer arietinum L. HOM05D007534 ORTHO05D009540 6.2e-27 124.4 65 87.7
Lj5g0014413 Lotus japonicus HOM05D007534 ORTHO05D009540 6.2e-27 124.4 65 87.7
Carub.0004s1873 Capsella rubella HOM05D007534 ORTHO05D009540 1.1e-26 123.6 65 87.7
Dinv37321 Davidia involucrata HOM05D001037 ORTHO05D000888 1.1e-26 123.6 66 84.8
Manes.09G065300 Manihot esculenta HOM05D007534 ORTHO05D009540 1.1e-26 123.6 65 87.7
Oeu005026.1 Olea europaea HOM05D007534 ORTHO05D009540 1.1e-26 123.6 65 86.2
TAR369G0058 Trochodendron aralioides HOM05D007534 ORTHO05D009540 1.1e-26 123.6 65 87.7
Aqoxy1G01139 Aquilegia oxysepala HOM05D007534 ORTHO05D009540 1.4e-26 123.2 65 86.2
CAN.G900.25 Capsicum annuum HOM05D007534 ORTHO05D009540 1.4e-26 123.2 65 87.7
Thhalv10017130m.g Eutrema salsugineum HOM05D007534 ORTHO05D009540 1.4e-26 123.2 65 87.7
Gohir.A01G213100 Gossypium hirsutum HOM05D007534 ORTHO05D009540 1.4e-26 123.2 65 87.7
Lalb_Chr06g0171761 Lupinus albus HOM05D007534 ORTHO05D009540 1.4e-26 123.2 65 86.2
Nitab4.5_0000578g0110 Nicotiana tabacum HOM05D007534 ORTHO05D009540 1.4e-26 123.2 65 87.7
SalBow3G3627 Salvia bowleyana HOM05D007534 ORTHO05D009540 1.4e-26 123.2 65 86.2
Solyc09g008270.3 Solanum lycopersicum HOM05D007534 ORTHO05D009540 1.4e-26 123.2 65 87.7
Sopen09g003090 Solanum pennellii HOM05D007534 ORTHO05D009540 1.4e-26 123.2 65 87.7
vmacro08785 Vaccinium macrocarpon HOM05D007534 ORTHO05D009540 1.4e-26 123.2 65 86.2
Glyma.13G141700 Glycine max HOM05D007534 ORTHO05D009540 1.8e-26 122.9 65 87.7
Hma1.2p1_0205F.1_g086900 Hydrangea macrophylla HOM05D007534 ORTHO05D009540 1.8e-26 122.9 65 86.2
RcHm_v2.0_Chr3g0470401 Rosa chinensis HOM05D007534 ORTHO05D009540 1.8e-26 122.9 65 86.2
Zm00001eb003080 Zea mays HOM05D007534 ORTHO05D009540 1.8e-26 122.9 65 89.2
AL4G33100 Arabidopsis lyrata HOM05D007534 ORTHO05D009540 2.4e-26 122.5 65 86.2
AT2G36885 Arabidopsis thaliana HOM05D007534 ORTHO05D009540 2.4e-26 122.5 65 86.2
Hma1.2p1_0828F.1_g225100 Hydrangea macrophylla HOM05D007534 ORTHO05D009540 2.4e-26 122.5 66 84.8
Psat6g074600 Pisum sativum HOM05D007534 ORTHO05D009540 2.4e-26 122.5 65 86.2
Potri.016G098900 Populus trichocarpa HOM05D007534 ORTHO05D009540 2.4e-26 122.5 65 87.7
MELO3C024472.2 Cucumis melo HOM05D007534 ORTHO05D009540 3.1e-26 122.1 65 87.7
CANSAT80G0853 Cannabis sativa HOM05D007534 ORTHO05D009540 4.0e-26 121.7 65 86.2
AUR62042063 Chenopodium quinoa HOM05D007534 ORTHO05D009540 4.0e-26 121.7 65 84.6
Haze_20525 Corylus avellana HOM05D007534 ORTHO05D009540 4.0e-26 121.7 66 86.4
CsaV3_6G039950 Cucumis sativus L. HOM05D007534 ORTHO05D009540 4.0e-26 121.7 65 86.2
Actinidia32489 Actinidia chinensis HOM05D007534 ORTHO05D009540 5.2e-26 121.3 65 86.2
Lj2A120T45 Lonicera japonica HOM05D007534 ORTHO05D009540 5.2e-26 121.3 65 86.2
Prupe.7G128600 Prunus persica HOM05D007534 ORTHO05D009540 5.2e-26 121.3 65 84.6
PGSC0003DMG400003865 Solanum tuberosum HOM05D007534 ORTHO05D009540 5.2e-26 121.3 65 86.2
PSO266G0073 Papaver somniferum HOM05D007534 ORTHO05D009540 6.8e-26 120.9 65 86.2
Phvul.007G147900 Phaseolus vulgaris HOM05D007534 ORTHO05D009540 6.8e-26 120.9 65 86.2
Cfa017628 Carpinus fangiana HOM05D007534 ORTHO05D009540 8.9e-26 120.6 81 72.8
Migut.J00648 Erythranthe guttata HOM05D007534 ORTHO05D009540 8.9e-26 120.6 65 84.6
Medtr1g063070 Medicago truncatula HOM05D007534 ORTHO05D009540 8.9e-26 120.6 65 83.1
Rhsim04G0144000 Rhododendron simsii HOM05D007534 ORTHO05D009540 8.9e-26 120.6 65 84.6
CARHR131340 Cardamine hirsuta HOM05D007534 ORTHO05D009540 1.2e-25 120.2 65 86.2
Sed0017969 Sechium edule HOM05D007534 ORTHO05D009540 1.2e-25 120.2 65 86.2
GSVIVG01033650001 Vitis vinifera HOM05D007534 ORTHO05D009540 1.2e-25 120.2 65 83.1
COL.COLO4_26947 Corchorus olitorius HOM05D007534 ORTHO05D009540 1.5e-25 119.8 65 83.1
Nn2g13809 Nelumbo nucifera HOM05D007534 ORTHO05D009540 1.5e-25 119.8 65 84.6
QL07p043071 Quercus lobata HOM05D007534 ORTHO05D009540 1.5e-25 119.8 65 84.6
Os03g0137600 Oryza sativa ssp. japonica HOM05D007534 ORTHO05D009540 2.0e-25 119.4 65 86.2
Sabra16G0099100 Salix brachista HOM05D007534 ORTHO05D009540 2.6e-25 119.0 65 83.1
Sc20g0005570 Simmondsia chinensis HOM05D007534 ORTHO05D009540 2.6e-25 119.0 65 84.6
CDE09G0108 Ceratophyllum demersum HOM05D007534 ORTHO05D009540 3.4e-25 118.6 64 87.5
Sp4g19170 Schrenkiella parvula HOM05D007534 ORTHO05D009540 3.4e-25 118.6 65 86.2
HanXRQChr13g0400981 Helianthus annuus HOM05D007534 ORTHO05D009540 4.4e-25 118.2 65 83.1
SGA_v2.0_scaffold75G24837 Striga asiatica HOM05D007534 ORTHO05D009540 5.8e-25 117.9 64 84.4
Cc06_g04320 Coffea canephora HOM05D007534 ORTHO05D009540 9.9e-25 117.1 65 84.6
CSS0001990 Camellia sinensis var. sinensis HOM05D007534 ORTHO05D012079 1.7e-24 116.3 64 82.8
unitig_22.g5100 Utricularia gibba HOM05D007534 ORTHO05D009540 1.7e-24 116.3 67 82.1
FAN15G1333 Fragaria x ananassa HOM05D007534 ORTHO05D009540 2.2e-24 115.9 59 86.4
Aa31LG5G22110 Aethionema arabicum HOM05D007534 ORTHO05D009540 2.9e-24 115.5 65 84.6
MD12G1110000 Malus domestica HOM05D007534 ORTHO05D009540 3.8e-24 115.2 65 80.0
ECA233G2496 Erigeron canadensis HOM05D007534 ORTHO05D009540 6.4e-24 114.4 65 83.1
Lsat_1_v5_gn_6_24941 Lactuca sativa HOM05D007534 ORTHO05D009540 8.4e-24 114.0 65 78.5
AagrBONN_evm.TU.Sc2ySwM_117.1862 Anthoceros agrestis HOM05D007534 ORTHO05D009540 5.1e-21 104.8 65 75.4
Pp3c2_17450 Physcomitrium patens HOM05D007534 ORTHO05D009540 9.6e-20 100.5 65 73.8
CSS0046236 Camellia sinensis var. sinensis HOM05D007534 ORTHO05D009540 2.1e-19 99.4 69 73.9
Mapoly0049s0045 Marchantia polymorpha HOM05D007534 ORTHO05D009540 3.6e-19 98.6 65 69.2
AUR62026915 Chenopodium quinoa HOM05D007534 ORTHO05D009540 9.3e-15 84.0 44 86.4
Ah.15g092560 Amaranthus hybridus HOM05D007534 ORTHO05D009540 1.6e-14 83.2 43 83.7
Peaxi162Scf00847g00032 Petunia axillaris HOM05D007534 ORTHO05D009540 2.7e-14 82.4 43 86.0
Cre02.g143450 Chlamydomonas reinhardtii HOM05D007534 ORTHO05D009540 3.5e-14 82.0 66 60.6
QL03p002371 Quercus lobata HOM05D007534 ORTHO05D009540 3.5e-14 82.0 50 78.0
EL10Ac7g16645 Beta vulgaris HOM05D007534 ORTHO05D009540 1.3e-13 80.1 43 83.7
Nitab4.5_0008624g0030 Nicotiana tabacum HOM05D007534 ORTHO05D009540 1.9e-12 76.3 41 82.9
MD04G1092000 Malus domestica HOM05D007534 ORTHO05D009540 2.6e-09 65.9 36 75.0
Rhsim04G0142700 Rhododendron simsii HOM05D007534 ORTHO05D009540 1.9e-07 59.7 31 83.9


User provided reference genes

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