Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0680G398 Amborella trichopoda HOM05D003940 ORTHO05D004461 2.2e-64 248.8 125 100.0
TAR636G1753 Trochodendron aralioides HOM05D003940 ORTHO05D004461 3.1e-10 68.9 95 46.3
MBI18_g43342_MAGBIO Magnolia biondii HOM05D003940 ORTHO05D004461 6.8e-10 67.8 101 38.6
AUR62002262 Chenopodium quinoa HOM05D003940 ORTHO05D004461 8.9e-10 67.4 76 52.6
Sc19g0003500 Simmondsia chinensis HOM05D003940 ORTHO05D004461 1.5e-09 66.6 73 49.3
TAR362G0514 Trochodendron aralioides HOM05D003940 ORTHO05D004461 2.0e-09 66.2 103 44.7
TAR365G0320 Trochodendron aralioides HOM05D003940 ORTHO05D004461 2.6e-09 65.9 109 44.0
Aqoxy5G00265 Aquilegia oxysepala HOM05D003940 ORTHO05D004461 4.4e-09 65.1 121 36.4
QL06p016655 Quercus lobata HOM05D003940 ORTHO05D004461 4.4e-09 65.1 88 44.3
AUR62015478 Chenopodium quinoa HOM05D000816 ORTHO05D005265 7.5e-09 64.3 99 41.4
Hma1.2p1_0986F.1_g244370 Hydrangea macrophylla HOM05D003940 ORTHO05D004461 2.2e-08 62.8 81 46.9
Lalb_Chr19g0128361 Lupinus albus HOM05D003940 ORTHO05D004461 2.9e-08 62.4 85 44.7
Lalb_Chr21g0312371 Lupinus albus HOM05D003940 ORTHO05D004461 2.9e-08 62.4 90 42.2
Phvul.007G129450 Phaseolus vulgaris HOM05D003940 ORTHO05D004461 2.9e-08 62.4 75 45.3
EL10Ac3g05913 Beta vulgaris HOM05D003940 ORTHO05D004461 3.7e-08 62.0 77 48.1
Glyma.10G188200 Glycine max HOM05D003940 ORTHO05D004461 3.7e-08 62.0 75 48.0
Sc13g0005150 Simmondsia chinensis HOM05D003940 ORTHO05D004461 6.4e-08 61.2 78 46.2
Gohir.D09G056900 Gossypium hirsutum HOM05D003940 ORTHO05D004461 8.3e-08 60.8 94 43.6
TAR602G0001 Trochodendron aralioides HOM05D003940 ORTHO05D004461 8.3e-08 60.8 103 42.7
Lj5g0009696 Lotus japonicus HOM05D003940 ORTHO05D004461 1.1e-07 60.5 77 46.8
Nitab4.5_0000342g0180 Nicotiana tabacum HOM05D003940 ORTHO05D004461 1.1e-07 60.5 90 43.3
COL.COLO4_15828 Corchorus olitorius HOM05D003940 ORTHO05D004461 1.4e-07 60.1 95 42.1
Glyma.20G202600 Glycine max HOM05D003940 ORTHO05D004461 1.4e-07 60.1 75 48.0
PGSC0003DMG400016324 Solanum tuberosum HOM05D003940 ORTHO05D004461 1.4e-07 60.1 83 48.2
Gorai.006G070500 Gossypium raimondii HOM05D003940 ORTHO05D004461 2.4e-07 59.3 95 47.4
Psat6g132880 Pisum sativum HOM05D003940 ORTHO05D004461 2.4e-07 59.3 82 46.3
TPR.G26431 Trifolium pratense HOM05D006440 ORTHO05D003987 3.2e-07 58.9 87 44.8
Psat6g138240 Pisum sativum HOM05D003940 ORTHO05D004461 4.1e-07 58.5 107 39.3
CANSAT78G1835 Cannabis sativa HOM05D003940 ORTHO05D004461 5.4e-07 58.2 101 41.6
Solyc06g053700.1 Solanum lycopersicum HOM05D003940 ORTHO05D004461 5.4e-07 58.2 83 47.0
Sopen06g018810 Solanum pennellii HOM05D003940 ORTHO05D004461 5.4e-07 58.2 83 47.0
MSTRG.9915 Avicennia marina HOM05D003940 ORTHO05D004461 7.1e-07 57.8 77 45.5
A10p02740 Brassica napus HOM05D003940 ORTHO05D004461 7.1e-07 57.8 90 41.1
BraA10t42542Z Brassica rapa HOM05D003940 ORTHO05D004461 7.1e-07 57.8 90 41.1
Thhalv10021654m.g Eutrema salsugineum HOM05D003940 ORTHO05D004461 7.1e-07 57.8 88 43.2
C05p02510 Brassica napus HOM05D003940 ORTHO05D004461 9.2e-07 57.4 90 41.1
Duzib151G0370 Durio zibethinus HOM05D003940 ORTHO05D004461 9.2e-07 57.4 95 41.1
SalBow3G4424 Salvia bowleyana HOM05D003940 ORTHO05D004461 9.2e-07 57.4 83 42.2
BolC5t29030H Brassica oleracea HOM05D003940 ORTHO05D004461 1.2e-06 57.0 90 41.1
CSS0034657 Camellia sinensis var. sinensis HOM05D003940 ORTHO05D004461 1.2e-06 57.0 84 40.5
Lsat_1_v5_gn_3_122140 Lactuca sativa HOM05D003940 ORTHO05D004461 1.2e-06 57.0 96 39.6
Cfa008351 Carpinus fangiana HOM05D003940 ORTHO05D004461 1.6e-06 56.6 89 42.7
Migut.N00250 Erythranthe guttata HOM05D003940 ORTHO05D004461 1.6e-06 56.6 89 41.6
Peaxi162Scf00024g01711 Petunia axillaris HOM05D003940 ORTHO05D004461 1.6e-06 56.6 94 40.4
Aqoxy2G03616 Aquilegia oxysepala HOM05D003940 ORTHO05D004461 2.1e-06 56.2 112 38.4
Cpa.g.sc44.90 Carica papaya HOM05D003940 ORTHO05D004461 2.1e-06 56.2 77 45.5
Ca_09815_v3 Cicer arietinum L. HOM05D003940 ORTHO05D004461 2.1e-06 56.2 76 44.7
Dinv44656 Davidia involucrata HOM05D003940 ORTHO05D004461 2.1e-06 56.2 96 40.6
Gohir.A09G225100 Gossypium hirsutum HOM05D003940 ORTHO05D004461 2.1e-06 56.2 97 36.1
TWI09G0780 Tripterygium wilfordii HOM05D003940 ORTHO05D004461 2.1e-06 56.2 84 48.8
Actinidia04462 Actinidia chinensis HOM05D003940 ORTHO05D004461 2.7e-06 55.8 79 41.8
BcaC05g24452 Brassica carinata HOM05D003940 ORTHO05D004461 2.7e-06 55.8 73 43.8
CSS0017531 Camellia sinensis var. sinensis HOM05D003940 ORTHO05D004461 2.7e-06 55.8 78 42.3
Gohir.D09G226800 Gossypium hirsutum HOM05D003940 ORTHO05D004461 2.7e-06 55.8 97 36.1
Gorai.006G248700 Gossypium raimondii HOM05D003940 ORTHO05D004461 2.7e-06 55.8 97 36.1
Nitab4.5_0007234g0020 Nicotiana tabacum HOM05D003940 ORTHO05D004461 2.7e-06 55.8 94 39.4
TPR.G15869 Trifolium pratense HOM05D003940 ORTHO05D004461 2.7e-06 55.8 88 39.8
Thhalv10009178m.g Eutrema salsugineum HOM05D003940 ORTHO05D004461 3.5e-06 55.5 91 41.8
Medtr1g073910 Medicago truncatula HOM05D003940 ORTHO05D004461 4.6e-06 55.1 71 45.1
Cc03_g05120 Coffea canephora HOM05D003940 ORTHO05D004461 6.0e-06 54.7 92 38.0
AT1G04330 Arabidopsis thaliana HOM05D003940 ORTHO05D004461 7.8e-06 54.3 90 40.0
ClCG06G006840 Citrullus lanatus HOM05D003940 ORTHO05D004461 7.8e-06 54.3 81 43.2
Lj6g0004880 Lotus japonicus HOM05D003940 ORTHO05D004461 7.8e-06 54.3 72 44.4
Sp1g03140 Schrenkiella parvula HOM05D003940 ORTHO05D004461 7.8e-06 54.3 90 41.1


User provided reference genes

Program Settings