Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0680G209 Amborella trichopoda HOM05D001607 ORTHO05D001893 2.9e-38 161.4 80 100.0
ATR0680G301 Amborella trichopoda HOM05D001607 ORTHO05D001893 1.4e-21 105.9 59 86.4
SEGI_31249 Sequoiadendron giganteum HOM05D001607 ORTHO05D001893 2.7e-20 101.7 59 81.4
Nitab4.5_0001842g0120 Nicotiana tabacum HOM05D001607 ORTHO05D001893 3.6e-20 101.3 59 79.7
Nitab4.5_0005845g0050 Nicotiana tabacum HOM05D001607 ORTHO05D001893 3.6e-20 101.3 59 79.7
Lj1A999G29 Lonicera japonica HOM05D001607 ORTHO05D001893 6.1e-20 100.5 59 78.0
Cpa.g.sc107.66 Carica papaya HOM05D001607 ORTHO05D001893 1.4e-19 99.4 59 81.4
Gohir.A08G099300 Gossypium hirsutum HOM05D001607 ORTHO05D001893 1.4e-19 99.4 59 79.7
Gohir.A11G010500 Gossypium hirsutum HOM05D001607 ORTHO05D001893 1.4e-19 99.4 59 79.7
Gohir.D08G110716 Gossypium hirsutum HOM05D001607 ORTHO05D001893 1.4e-19 99.4 59 79.7
Gohir.D11G009700 Gossypium hirsutum HOM05D001607 ORTHO05D001893 1.4e-19 99.4 59 79.7
Gorai.004G118300 Gossypium raimondii HOM05D001607 ORTHO05D001893 1.4e-19 99.4 59 79.7
Gorai.007G011200 Gossypium raimondii HOM05D001607 ORTHO05D001893 1.4e-19 99.4 59 79.7
PSO478G2555 Papaver somniferum HOM05D001607 ORTHO05D001893 1.4e-19 99.4 59 81.4
PSO782G3230 Papaver somniferum HOM05D001607 ORTHO05D001893 1.4e-19 99.4 59 81.4
Thecc.03G178600 Theobroma cacao HOM05D001607 ORTHO05D001893 1.4e-19 99.4 59 79.7
Ca_05502_v3 Cicer arietinum L. HOM05D001607 ORTHO05D001893 1.8e-19 99.0 59 79.7
Lj2g0000053 Lotus japonicus HOM05D001607 ORTHO05D001893 1.8e-19 99.0 59 79.7
Oeu045396.1 Olea europaea HOM05D001607 ORTHO05D001893 2.3e-19 98.6 59 78.0
CiPaw.03G107800 Carya illinoinensis HOM05D001607 ORTHO05D001893 3.0e-19 98.2 59 78.0
Ca_10751_v3 Cicer arietinum L. HOM05D001607 ORTHO05D001893 3.0e-19 98.2 59 78.0
Duzib205G1855 Durio zibethinus HOM05D001607 ORTHO05D001893 3.0e-19 98.2 59 78.0
MBI18_g25519_MAGBIO Magnolia biondii HOM05D001607 ORTHO05D001893 3.0e-19 98.2 59 81.4
Actinidia25880 Actinidia chinensis HOM05D001607 ORTHO05D001893 3.9e-19 97.8 59 79.7
Actinidia34121 Actinidia chinensis HOM05D001607 ORTHO05D001893 3.9e-19 97.8 59 79.7
Cfa022712 Carpinus fangiana HOM05D001607 ORTHO05D001893 3.9e-19 97.8 59 78.0
CiPaw.04G071800 Carya illinoinensis HOM05D001607 ORTHO05D001893 3.9e-19 97.8 59 78.0
AUR62015965 Chenopodium quinoa HOM05D001607 ORTHO05D001893 3.9e-19 97.8 59 79.7
AUR62021171 Chenopodium quinoa HOM05D001607 ORTHO05D001893 3.9e-19 97.8 59 79.7
Duzib068G0651 Durio zibethinus HOM05D001607 ORTHO05D001893 3.9e-19 97.8 59 78.0
arahy.Tifrunner.gnm1.ann1.2YSW8E Arachis hypogaea HOM05D001607 ORTHO05D001893 5.1e-19 97.4 59 79.7
arahy.Tifrunner.gnm1.ann1.HZL4S5 Arachis hypogaea HOM05D001607 ORTHO05D001893 5.1e-19 97.4 59 79.7
arahy.Tifrunner.gnm1.ann1.M3PRP5 Arachis hypogaea HOM05D001607 ORTHO05D001893 5.1e-19 97.4 59 79.7
CSS0006931 Camellia sinensis var. sinensis HOM05D001607 ORTHO05D001893 5.1e-19 97.4 59 78.0
COL.COLO4_14332 Corchorus olitorius HOM05D001607 ORTHO05D001893 5.1e-19 97.4 59 78.0
Eucgr.A02778 Eucalyptus grandis HOM05D001607 ORTHO05D001893 5.1e-19 97.4 59 79.7
Glyma.09G137200 Glycine max HOM05D001607 ORTHO05D001893 5.1e-19 97.4 59 79.7
Glyma.16G182500 Glycine max HOM05D001607 ORTHO05D001893 5.1e-19 97.4 59 79.7
Manes.06G148500 Manihot esculenta HOM05D001607 ORTHO05D001893 5.1e-19 97.4 59 76.3
Nn1g01507 Nelumbo nucifera HOM05D001607 ORTHO05D001893 5.1e-19 97.4 59 79.7
TAR375G0166 Trochodendron aralioides HOM05D001607 ORTHO05D001893 5.1e-19 97.4 59 79.7
Ah.07g207010 Amaranthus hybridus HOM05D001607 ORTHO05D001893 6.7e-19 97.1 59 78.0
AagrBONN_evm.TU.Sc2ySwM_344.3434 Anthoceros agrestis HOM05D001607 ORTHO05D001893 6.7e-19 97.1 59 76.3
Rhsim03G0187200 Rhododendron simsii HOM05D001607 ORTHO05D001893 6.7e-19 97.1 59 76.3
SGA_v2.0_scaffold44G16733 Striga asiatica HOM05D001607 ORTHO05D001893 6.7e-19 97.1 59 76.3
HPP92_011358 Vanilla planifolia HOM05D001607 ORTHO05D001893 6.7e-19 97.1 59 78.0
CANSAT21G1423 Cannabis sativa HOM05D001607 ORTHO05D001893 8.8e-19 96.7 59 79.7
MELO3C005470.2 Cucumis melo HOM05D001607 ORTHO05D001893 8.8e-19 96.7 59 78.0
CsaV3_5G004660 Cucumis sativus L. HOM05D001607 ORTHO05D001893 8.8e-19 96.7 59 78.0
RcHm_v2.0_Chr1g0377641 Rosa chinensis HOM05D001607 ORTHO05D001893 8.8e-19 96.7 59 78.0
Sed0028131 Sechium edule HOM05D001607 ORTHO05D001893 8.8e-19 96.7 59 78.0
SMO367G0172 Selaginella moellendorffii HOM05D001607 ORTHO05D001893 8.8e-19 96.7 59 74.6
vmacro06666 Vaccinium macrocarpon HOM05D001607 ORTHO05D001893 8.8e-19 96.7 59 76.3
FvH4_7g29630 Fragaria vesca HOM05D001607 ORTHO05D001893 1.1e-18 96.3 59 78.0
FAN01G0648 Fragaria x ananassa HOM05D001607 ORTHO05D001893 1.1e-18 96.3 59 78.0
FAN03G1039 Fragaria x ananassa HOM05D001607 ORTHO05D001893 1.1e-18 96.3 59 78.0
FAN03G1056 Fragaria x ananassa HOM05D001607 ORTHO05D001893 1.1e-18 96.3 59 78.0
FAN06G1924 Fragaria x ananassa HOM05D001607 ORTHO05D001893 1.1e-18 96.3 59 78.0
FAN06G4239 Fragaria x ananassa HOM05D001607 ORTHO05D001893 1.1e-18 96.3 59 78.0
FAN10G1529 Fragaria x ananassa HOM05D001607 ORTHO05D001893 1.1e-18 96.3 59 78.0
FAN10G2541 Fragaria x ananassa HOM05D001607 ORTHO05D001893 1.1e-18 96.3 59 78.0
Lsat_1_v5_gn_8_8420 Lactuca sativa HOM05D001607 ORTHO05D001893 1.1e-18 96.3 59 78.0
Medtr1g101030 Medicago truncatula HOM05D001607 ORTHO05D001893 1.1e-18 96.3 59 76.3
unitig_46.g18794 Utricularia gibba HOM05D001607 ORTHO05D001893 1.1e-18 96.3 59 76.3
VMungo0464G1130 Vigna mungo HOM05D001607 ORTHO05D001893 1.1e-18 96.3 59 78.0
GSVIVG01028929001 Vitis vinifera HOM05D001607 ORTHO05D001893 1.1e-18 96.3 59 76.3
MSTRG.27107 Avicennia marina HOM05D001607 ORTHO05D001893 1.5e-18 95.9 59 76.3
CAN.G307.24 Capsicum annuum HOM05D001607 ORTHO05D001893 1.5e-18 95.9 59 76.3
CDE08G0131 Ceratophyllum demersum HOM05D001607 ORTHO05D001893 1.5e-18 95.9 59 74.6
Dinv28425 Davidia involucrata HOM05D001607 ORTHO05D001893 1.5e-18 95.9 59 74.6
Lj5g0010480 Lotus japonicus HOM05D001607 ORTHO05D001893 1.5e-18 95.9 59 78.0
Os02g0664300 Oryza sativa ssp. japonica HOM05D001607 ORTHO05D001893 1.5e-18 95.9 59 78.0
HPP92_011359 Vanilla planifolia HOM05D001607 ORTHO05D001893 1.5e-18 95.9 58 81.0
DCAR_001509 Daucus carota HOM05D001607 ORTHO05D001893 2.0e-18 95.5 61 73.8
Psat0s3405g0040 Pisum sativum HOM05D001607 ORTHO05D001893 2.0e-18 95.5 59 78.0
Thhalv10024222m.g Eutrema salsugineum HOM05D001607 ORTHO05D001893 2.6e-18 95.1 59 76.3
AL7G33300 Arabidopsis lyrata HOM05D001607 ORTHO05D001893 3.3e-18 94.7 59 74.6
AT4G20850 Arabidopsis thaliana HOM05D001607 ORTHO05D001893 3.3e-18 94.7 59 74.6
Carub.0007s2059 Capsella rubella HOM05D001607 ORTHO05D001893 3.3e-18 94.7 59 74.6
Mapoly0069s0029 Marchantia polymorpha HOM05D001607 ORTHO05D001893 3.3e-18 94.7 59 74.6
Phvul.004G114200 Phaseolus vulgaris HOM05D001607 ORTHO05D001893 3.3e-18 94.7 59 76.3
Potri.015G145300 Populus trichocarpa HOM05D001607 ORTHO05D001893 3.3e-18 94.7 59 78.0
Potri.012G142200 Populus trichocarpa HOM05D001607 ORTHO05D001893 4.4e-18 94.4 59 76.3
Sabra12G0106800 Salix brachista HOM05D001607 ORTHO05D001893 4.4e-18 94.4 59 76.3
THA.LOC104812206 Tarenaya hassleriana HOM05D001607 ORTHO05D001893 4.4e-18 94.4 59 74.6
Zm00001eb249900 Zea mays HOM05D001607 ORTHO05D001893 4.4e-18 94.4 59 76.3
Atru.chr1.433 Acer truncatum HOM05D001607 ORTHO05D001893 5.7e-18 94.0 59 74.6
CARHR227400 Cardamine hirsuta HOM05D001607 ORTHO05D001893 5.7e-18 94.0 59 74.6
Psat6g198240 Pisum sativum HOM05D001607 ORTHO05D001893 5.7e-18 94.0 59 76.3
Sc25g0000580 Simmondsia chinensis HOM05D001607 ORTHO05D001893 5.7e-18 94.0 59 76.3
Aqoxy1G00239 Aquilegia oxysepala HOM05D001607 ORTHO05D001893 7.4e-18 93.6 59 78.0
BcaNung05068 Brassica carinata HOM05D001607 ORTHO05D001893 7.4e-18 93.6 59 72.9
A03p52520 Brassica napus HOM05D001607 ORTHO05D001893 7.4e-18 93.6 59 72.9
C07p50960 Brassica napus HOM05D001607 ORTHO05D001893 7.4e-18 93.6 59 72.9
BolC7t45597H Brassica oleracea HOM05D001607 ORTHO05D001893 7.4e-18 93.6 59 72.9
BraA03t14327Z Brassica rapa HOM05D001607 ORTHO05D001893 7.4e-18 93.6 59 72.9
SalBow4G1573 Salvia bowleyana HOM05D001607 ORTHO05D001893 7.4e-18 93.6 61 72.1
Sp7g18940 Schrenkiella parvula HOM05D001607 ORTHO05D001893 7.4e-18 93.6 59 72.9
EL10Ac3g05618 Beta vulgaris HOM05D001607 ORTHO05D001893 9.7e-18 93.2 58 79.3
Haze_13673 Corylus avellana HOM05D001607 ORTHO05D001893 9.7e-18 93.2 58 77.6
Medtr0025s0060 Medicago truncatula HOM05D001607 ORTHO05D001893 9.7e-18 93.2 59 76.3
PGR042G0514 Punica granatum HOM05D001607 ORTHO05D001893 9.7e-18 93.2 59 78.0
arahy.Tifrunner.gnm1.ann1.CMMP9X Arachis hypogaea HOM05D001607 ORTHO05D001893 1.3e-17 92.8 59 74.6
arahy.Tifrunner.gnm1.ann1.GK85WT Arachis hypogaea HOM05D001607 ORTHO05D001893 1.3e-17 92.8 59 74.6
ClCG01G004440 Citrullus lanatus HOM05D001607 ORTHO05D001893 1.3e-17 92.8 59 76.3
TPR.G8164 Trifolium pratense HOM05D001607 ORTHO05D001893 1.7e-17 92.4 59 76.3
TWI39G1280 Tripterygium wilfordii HOM05D001607 ORTHO05D001893 1.7e-17 92.4 59 76.3
ECA233G5223 Erigeron canadensis HOM05D001607 ORTHO05D001893 2.8e-17 91.7 59 76.3
Migut.F00330 Erythranthe guttata HOM05D001607 ORTHO05D001893 2.8e-17 91.7 59 72.9
Eucgr.A02780 Eucalyptus grandis HOM05D001607 ORTHO05D001893 2.8e-17 91.7 59 76.3
Solyc03g025610.3 Solanum lycopersicum HOM05D001607 ORTHO05D001893 2.8e-17 91.7 59 72.9
Sopen03g004440 Solanum pennellii HOM05D001607 ORTHO05D001893 2.8e-17 91.7 59 72.9
Sopen03g004450 Solanum pennellii HOM05D001607 ORTHO05D001893 2.8e-17 91.7 59 72.9
Lalb_Chr02g0141081 Lupinus albus HOM05D001607 ORTHO05D001893 3.7e-17 91.3 59 74.6
Lalb_Chr19g0130771 Lupinus albus HOM05D001607 ORTHO05D001893 3.7e-17 91.3 59 76.3
Aa31LG6G2920 Aethionema arabicum HOM05D001607 ORTHO05D001893 4.8e-17 90.9 59 72.9
MD01G1203100 Malus domestica HOM05D001607 ORTHO05D001893 4.8e-17 90.9 59 71.2
MD07G1272600 Malus domestica HOM05D001607 ORTHO05D001893 4.8e-17 90.9 59 71.2
Prupe.2G295900 Prunus persica HOM05D001607 ORTHO05D001893 4.8e-17 90.9 59 74.6
SGA_v2.0_scaffold60G21061 Striga asiatica HOM05D001607 ORTHO05D001893 4.8e-17 90.9 59 72.9
BcaC09g51300 Brassica carinata HOM05D001607 ORTHO05D001893 6.3e-17 90.5 59 71.2
BcaNung04146 Brassica carinata HOM05D001607 ORTHO05D001893 6.3e-17 90.5 59 71.2
A01p12270 Brassica napus HOM05D001607 ORTHO05D001893 6.3e-17 90.5 59 71.2
C01p14680 Brassica napus HOM05D001607 ORTHO05D001893 6.3e-17 90.5 59 71.2
BolC1t01419H Brassica oleracea HOM05D001607 ORTHO05D001893 6.3e-17 90.5 59 71.2
BraA01t01171Z Brassica rapa HOM05D001607 ORTHO05D001893 6.3e-17 90.5 59 71.2
HanXRQChr10g0304171 Helianthus annuus HOM05D001607 ORTHO05D001893 6.3e-17 90.5 59 74.6
Glyma.10G234500 Glycine max HOM05D001607 ORTHO05D001893 1.1e-16 89.7 59 74.6
VMungo0720G1584 Vigna mungo HOM05D001607 ORTHO05D001893 1.1e-16 89.7 59 74.6
Pp3c7_23000 Physcomitrium patens HOM05D001607 ORTHO05D001893 1.4e-16 89.4 59 71.2
Hund04758 Selenicereus undatus HOM05D001607 ORTHO05D001893 1.8e-16 89.0 58 75.9
Zm00001eb111040 Zea mays HOM05D000323 ORTHO05D000201 1.8e-16 89.0 60 73.3
Phvul.007G071600 Phaseolus vulgaris HOM05D001607 ORTHO05D001893 2.4e-16 88.6 59 72.9
Pp3c2_32420 Physcomitrium patens HOM05D001607 ORTHO05D001893 3.1e-16 88.2 59 71.2
TPR.G26981 Trifolium pratense HOM05D001607 ORTHO05D001893 4.1e-16 87.8 71 63.4
CSS0006239 Camellia sinensis var. sinensis HOM05D001607 ORTHO05D001893 5.9e-15 84.0 58 72.4
THA.LOC104824854 Tarenaya hassleriana HOM05D001607 ORTHO05D001893 1.3e-14 82.8 59 67.8
Cre16.g675350 Chlamydomonas reinhardtii HOM05D001607 ORTHO05D001893 1.7e-14 82.4 61 63.9
PRCOL_00005219 Prasinoderma coloniale HOM05D001607 ORTHO05D001893 2.9e-14 81.6 63 61.9
THA.LOC104824860 Tarenaya hassleriana HOM05D001607 ORTHO05D001893 6.5e-14 80.5 59 66.1
Ciclev10004167m.g Citrus clementina HOM05D001607 ORTHO05D001893 1.2e-12 76.3 44 79.5
SHI17153 Sapria himalayana HOM05D001607 ORTHO05D001893 1.4e-11 72.8 74 54.1
SHI17279 Sapria himalayana HOM05D001607 ORTHO05D001893 6.7e-11 70.5 50 68.0
Peaxi162Scf00444g00720 Petunia axillaris HOM05D001607 ORTHO05D001893 2.0e-10 68.9 42 78.6
SHI52599 Sapria himalayana HOM05D001607 ORTHO05D001893 3.3e-10 68.2 58 60.3
SHI54338 Sapria himalayana HOM05D001607 ORTHO05D001893 3.3e-10 68.2 58 60.3
SHI07622 Sapria himalayana HOM05D001607 ORTHO05D001893 1.3e-09 66.2 72 51.4
SHI51849 Sapria himalayana HOM05D001607 ORTHO05D001893 2.8e-09 65.1 73 50.7
SHI39452 Sapria himalayana HOM05D001607 ORTHO05D001893 6.3e-09 63.9 75 44.0
SHI51408 Sapria himalayana HOM05D001607 ORTHO05D001893 6.3e-09 63.9 51 58.8
SHI34334 Sapria himalayana HOM05D001607 ORTHO05D001893 1.4e-08 62.8 69 49.3
SHI51682 Sapria himalayana HOM05D001607 ORTHO05D001893 1.4e-08 62.8 69 50.7
SHI53940 Sapria himalayana HOM05D001607 ORTHO05D001893 1.4e-08 62.8 50 60.0
SHI36438 Sapria himalayana HOM05D001607 ORTHO05D001893 2.4e-08 62.0 51 58.8
SHI34712 Sapria himalayana HOM05D001607 ORTHO05D001893 3.1e-08 61.6 68 54.4
SHI35771 Sapria himalayana HOM05D001607 ORTHO05D001893 3.1e-08 61.6 67 49.3
SHI35317 Sapria himalayana HOM05D001607 ORTHO05D001893 4.1e-08 61.2 73 47.9
SHI50611 Sapria himalayana HOM05D001607 ORTHO05D001893 4.1e-08 61.2 74 43.2
SHI51593 Sapria himalayana HOM05D001607 ORTHO05D001893 4.1e-08 61.2 73 47.9
SHI39949 Sapria himalayana HOM05D001607 ORTHO05D001893 5.3e-08 60.8 51 56.9
SHI51516 Sapria himalayana HOM05D001607 ORTHO05D001893 9.1e-08 60.1 51 56.9
SHI42704 Sapria himalayana HOM05D001607 ORTHO05D001893 1.2e-07 59.7 74 43.2
SHI51445 Sapria himalayana HOM05D001607 ORTHO05D001893 1.2e-07 59.7 71 46.5
SHI17500 Sapria himalayana HOM05D001607 ORTHO05D001893 1.6e-07 59.3 71 46.5
SHI51146 Sapria himalayana HOM05D001607 ORTHO05D001893 1.6e-07 59.3 50 54.0
SHI39067 Sapria himalayana HOM05D001607 ORTHO05D001893 2.0e-07 58.9 51 56.9
SHI32637 Sapria himalayana HOM05D001607 ORTHO05D001893 2.7e-07 58.5 50 58.0
SHI35008 Sapria himalayana HOM05D001607 ORTHO05D001893 2.7e-07 58.5 67 46.3
SHI51833 Sapria himalayana HOM05D001607 ORTHO05D001893 3.5e-07 58.2 51 54.9
SHI32023 Sapria himalayana HOM05D001607 ORTHO05D001893 5.9e-07 57.4 65 47.7
SHI49655 Sapria himalayana HOM05D001607 ORTHO05D001893 5.9e-07 57.4 63 42.9
SHI51071 Sapria himalayana HOM05D001607 ORTHO05D001893 5.9e-07 57.4 51 56.9
SHI51913 Sapria himalayana HOM05D001607 ORTHO05D001893 5.9e-07 57.4 51 54.9
SHI52078 Sapria himalayana HOM05D001607 ORTHO05D001893 5.9e-07 57.4 51 54.9
SHI54036 Sapria himalayana HOM05D001607 ORTHO05D001893 5.9e-07 57.4 71 43.7
SHI51806 Sapria himalayana HOM05D001607 ORTHO05D001893 1.3e-06 56.2 71 42.3
SHI29960 Sapria himalayana HOM05D001607 ORTHO05D001893 1.7e-06 55.8 51 51.0
SHI53902 Sapria himalayana HOM05D001607 ORTHO05D001893 1.7e-06 55.8 50 50.0
SHI50829 Sapria himalayana HOM05D001607 ORTHO05D001893 2.9e-06 55.1 50 52.0
SHI43310 Sapria himalayana HOM05D001607 ORTHO05D001893 3.8e-06 54.7 71 42.3
SHI51073 Sapria himalayana HOM05D001607 ORTHO05D001893 5.0e-06 54.3 58 53.4
SHI12510 Sapria himalayana HOM05D001607 ORTHO05D001893 6.5e-06 53.9 74 43.2


User provided reference genes

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