Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0680G185 Amborella trichopoda HOM05D002419 ORTHO05D008128 1.5e-97 359.8 222 100.0
Duzib170G1173 Durio zibethinus HOM05D002419 ORTHO05D008128 2.1e-46 189.9 138 63.8
TPR.G11328 Trifolium pratense HOM05D002419 ORTHO05D008128 2.1e-46 189.9 139 64.0
Manes.11G141200 Manihot esculenta HOM05D002419 ORTHO05D008128 2.8e-46 189.5 138 64.5
QL01p037215 Quercus lobata HOM05D002419 ORTHO05D008128 6.8e-45 184.9 138 63.0
Gorai.001G129900 Gossypium raimondii HOM05D002419 ORTHO05D008128 8.9e-45 184.5 136 61.8
TWI75G1733 Tripterygium wilfordii HOM05D002419 ORTHO05D008128 1.5e-44 183.7 138 61.6
Ca_06160_v3 Cicer arietinum L. HOM05D002419 ORTHO05D008128 2.6e-44 183.0 135 61.5
Actinidia03711 Actinidia chinensis HOM05D002419 ORTHO05D008128 3.4e-44 182.6 137 62.0
CSS0035547 Camellia sinensis var. sinensis HOM05D002419 ORTHO05D008128 3.4e-44 182.6 137 62.8
Cfa011364 Carpinus fangiana HOM05D005177 ORTHO05D006175 4.4e-44 182.2 137 62.0
Lalb_Chr25g0283021 Lupinus albus HOM05D002419 ORTHO05D008128 4.4e-44 182.2 138 61.6
COL.COLO4_32908 Corchorus olitorius HOM05D002419 ORTHO05D008128 7.5e-44 181.4 138 61.6
Dinv29347 Davidia involucrata HOM05D002419 ORTHO05D008128 9.8e-44 181.0 133 66.2
Gohir.D07G120700 Gossypium hirsutum HOM05D002419 ORTHO05D008128 9.8e-44 181.0 136 61.0
GSVIVG01025134001 Vitis vinifera HOM05D002419 ORTHO05D008128 1.3e-43 180.6 134 59.7
Haze_23915 Corylus avellana HOM05D002419 ORTHO05D008128 1.7e-43 180.3 137 60.6
Thecc.09G260200 Theobroma cacao HOM05D002419 ORTHO05D008128 1.7e-43 180.3 140 58.6
Lj2A1017T34 Lonicera japonica HOM05D002419 ORTHO05D008128 2.2e-43 179.9 137 62.8
Psat2g021880 Pisum sativum HOM05D002419 ORTHO05D008128 2.2e-43 179.9 139 60.4
Cpa.g.sc139.69 Carica papaya HOM05D002419 ORTHO05D008128 2.9e-43 179.5 137 60.6
CsaV3_6G021630 Cucumis sativus L. HOM05D002419 ORTHO05D008128 2.9e-43 179.5 130 61.5
Glyma.14G041000 Glycine max HOM05D002419 ORTHO05D008128 2.9e-43 179.5 137 60.6
Gohir.A07G116300 Gossypium hirsutum HOM05D002419 ORTHO05D008128 2.9e-43 179.5 136 59.6
CiPaw.13G107000 Carya illinoinensis HOM05D002419 ORTHO05D008128 3.7e-43 179.1 137 59.9
PSO339G2915 Papaver somniferum HOM05D002419 ORTHO05D008128 3.7e-43 179.1 132 62.1
Psat2g022480 Pisum sativum HOM05D002419 ORTHO05D008128 1.1e-42 177.6 140 60.0
Medtr5g087960 Medicago truncatula HOM05D002419 ORTHO05D008128 1.9e-42 176.8 139 59.0
vmacro14413 Vaccinium macrocarpon HOM05D002419 ORTHO05D008128 1.9e-42 176.8 130 63.8
Glyma.02G275000 Glycine max HOM05D002419 ORTHO05D008128 3.2e-42 176.0 137 59.9
Potri.006G133800 Populus trichocarpa HOM05D002419 ORTHO05D008128 4.1e-42 175.6 141 61.0
Sc15g0001550 Simmondsia chinensis HOM05D002419 ORTHO05D008128 5.4e-42 175.3 134 62.7
VMungo0647G2488 Vigna mungo HOM05D002419 ORTHO05D008128 5.4e-42 175.3 134 59.7
Solyc06g075000.3 Solanum lycopersicum HOM05D002419 ORTHO05D008128 7.0e-42 174.9 134 61.2
Aqoxy6G01314 Aquilegia oxysepala HOM05D002419 ORTHO05D008128 9.2e-42 174.5 138 57.2
MBI04_g27072_MAGBIO Magnolia biondii HOM05D002419 ORTHO05D008128 9.2e-42 174.5 140 62.9
MD11G1129900 Malus domestica HOM05D002419 ORTHO05D008128 9.2e-42 174.5 131 62.6
Sopen06g031430 Solanum pennellii HOM05D002419 ORTHO05D008128 1.2e-41 174.1 134 61.2
EL10Ac8g19852 Beta vulgaris HOM05D002419 ORTHO05D008128 2.7e-41 172.9 131 63.4
FAN16G1578 Fragaria x ananassa HOM05D002419 ORTHO05D008128 2.7e-41 172.9 133 59.4
LjContig00564g0025850 Lotus japonicus HOM05D002419 ORTHO05D008128 2.7e-41 172.9 137 58.4
PSO801G0184 Papaver somniferum HOM05D002419 ORTHO05D008128 2.7e-41 172.9 132 59.8
arahy.Tifrunner.gnm1.ann1.AUHN72 Arachis hypogaea HOM05D002419 ORTHO05D008128 3.5e-41 172.6 132 62.1
COL.COLO4_25247 Corchorus olitorius HOM05D002419 ORTHO05D008128 3.5e-41 172.6 138 59.4
FAN25G2109 Fragaria x ananassa HOM05D002419 ORTHO05D008128 3.5e-41 172.6 133 59.4
Phvul.008G206400 Phaseolus vulgaris HOM05D002419 ORTHO05D008128 3.5e-41 172.6 132 61.4
PGR102G0399 Punica granatum HOM05D002419 ORTHO05D008128 3.5e-41 172.6 133 61.7
PGSC0003DMG400012002 Solanum tuberosum HOM05D002419 ORTHO05D008128 3.5e-41 172.6 134 61.2
Atru.chr3.3691 Acer truncatum HOM05D002419 ORTHO05D008128 4.6e-41 172.2 138 59.4
Phvul.008G172000 Phaseolus vulgaris HOM05D002419 ORTHO05D008128 6.0e-41 171.8 134 59.0
RcHm_v2.0_Chr5g0060661 Rosa chinensis HOM05D002419 ORTHO05D008128 6.0e-41 171.8 136 58.1
Nitab4.5_0000106g0340 Nicotiana tabacum HOM05D002419 ORTHO05D008128 1.7e-40 170.2 139 59.0
Rhsim01G0213200 Rhododendron simsii HOM05D002419 ORTHO05D008128 3.0e-40 169.5 130 62.3
Rhsim01G0213400 Rhododendron simsii HOM05D002419 ORTHO05D008128 3.0e-40 169.5 130 63.1
AT5G60335 Arabidopsis thaliana HOM05D002419 ORTHO05D008128 3.9e-40 169.1 136 58.8
Carub.0008s2104 Capsella rubella HOM05D002419 ORTHO05D008128 3.9e-40 169.1 136 59.6
Sabra06G0105100 Salix brachista HOM05D002419 ORTHO05D008128 3.9e-40 169.1 135 61.5
TAR633G0359 Trochodendron aralioides HOM05D002419 ORTHO05D008128 6.6e-40 168.3 137 56.2
DCAR_006043 Daucus carota HOM05D002419 ORTHO05D008128 1.5e-39 167.2 134 58.2
Prupe.6G094800 Prunus persica HOM05D002419 ORTHO05D008128 1.5e-39 167.2 137 58.4
AL8G36950 Arabidopsis lyrata HOM05D002419 ORTHO05D008128 2.5e-39 166.4 140 57.9
A03p11220 Brassica napus HOM05D002419 ORTHO05D008128 3.3e-39 166.0 134 58.2
Sabra03G0090700 Salix brachista HOM05D002419 ORTHO05D008128 7.3e-39 164.9 141 58.2
BolC9t58170H Brassica oleracea HOM05D002419 ORTHO05D005441 1.6e-38 163.7 132 59.8
BraA10t43836Z Brassica rapa HOM05D002419 ORTHO05D005441 1.6e-38 163.7 143 57.3
TPR.G11332 Trifolium pratense HOM05D002419 ORTHO05D008128 1.6e-38 163.7 132 58.3
arahy.Tifrunner.gnm1.ann1.2RF374 Arachis hypogaea HOM05D002419 ORTHO05D008128 2.1e-38 163.3 132 56.8
CARHR274000 Cardamine hirsuta HOM05D002419 ORTHO05D008128 2.1e-38 163.3 132 59.1
ECA248G1487 Erigeron canadensis HOM05D002419 ORTHO05D008128 2.1e-38 163.3 137 56.2
THA.LOC104814842 Tarenaya hassleriana HOM05D002419 ORTHO05D008128 2.1e-38 163.3 132 60.6
Aqoxy2G01471 Aquilegia oxysepala HOM05D002419 ORTHO05D008128 2.8e-38 162.9 138 52.9
C09p52960 Brassica napus HOM05D002419 ORTHO05D005441 2.8e-38 162.9 132 59.8
CANSAT54G1052 Cannabis sativa HOM05D002419 ORTHO05D008128 3.6e-38 162.5 140 50.7
BcaC04g19693 Brassica carinata HOM05D002419 ORTHO05D008128 4.7e-38 162.2 132 59.1
CAN.G2109.1 Capsicum annuum HOM05D002419 ORTHO05D008128 4.7e-38 162.2 134 58.2
Thhalv10014838m.g Eutrema salsugineum HOM05D002419 ORTHO05D008128 4.7e-38 162.2 132 56.8
Aa31LG1G12400 Aethionema arabicum HOM05D002419 ORTHO05D005441 6.2e-38 161.8 133 58.6
Hund27375 Selenicereus undatus HOM05D002419 ORTHO05D008128 6.2e-38 161.8 133 56.4
BolC3t13754H Brassica oleracea HOM05D002419 ORTHO05D005441 8.1e-38 161.4 132 59.1
A10p17550 Brassica napus HOM05D002419 ORTHO05D005441 1.1e-37 161.0 132 58.3
AUR62027574 Chenopodium quinoa HOM05D002419 ORTHO05D008128 1.1e-37 161.0 132 59.1
BraA03t10435Z Brassica rapa HOM05D002419 ORTHO05D008128 1.4e-37 160.6 132 58.3
Lsat_1_v5_gn_1_63680 Lactuca sativa HOM05D002419 ORTHO05D008128 1.8e-37 160.2 132 56.1
Peaxi162Scf00029g01714 Petunia axillaris HOM05D002419 ORTHO05D008128 1.8e-37 160.2 136 60.3
Oeu049265.1 Olea europaea HOM05D002419 ORTHO05D008128 4.0e-37 159.1 134 56.7
TAR636G2038 Trochodendron aralioides HOM05D002419 ORTHO05D008128 4.0e-37 159.1 134 56.0
CDE09G0261 Ceratophyllum demersum HOM05D007330 ORTHO05D008128 5.2e-37 158.7 124 56.5
BcaB08g36333 Brassica carinata HOM05D002419 ORTHO05D008128 6.8e-37 158.3 132 58.3
ClCG02G020940 Citrullus lanatus HOM05D002419 ORTHO05D008128 8.9e-37 157.9 124 57.3
Migut.N02582 Erythranthe guttata HOM05D002419 ORTHO05D008128 1.2e-36 157.5 137 56.2
TAR636G3373 Trochodendron aralioides HOM05D002419 ORTHO05D008128 1.2e-36 157.5 134 55.2
Oeu009377.1 Olea europaea HOM05D002419 ORTHO05D008128 2.0e-36 156.8 137 55.5
SalBow7G0817 Salvia bowleyana HOM05D002419 ORTHO05D008128 2.6e-36 156.4 136 53.7
Cc01_g10710 Coffea canephora HOM05D002419 ORTHO05D008128 7.5e-36 154.8 133 57.9
HanXRQChr01g0019131 Helianthus annuus HOM05D002419 ORTHO05D008128 7.5e-36 154.8 135 54.8
Sp6g21940 Schrenkiella parvula HOM05D002419 ORTHO05D008128 9.8e-36 154.5 132 56.8
Oeu049264.1 Olea europaea HOM05D002419 ORTHO05D008128 2.2e-35 153.3 135 55.6
SEGI_36576 Sequoiadendron giganteum HOM05D002419 ORTHO05D008128 2.2e-35 153.3 132 56.1
SHI33804 Sapria himalayana HOM05D002419 ORTHO05D008128 4.9e-35 152.1 138 50.7
Eucgr.B02468 Eucalyptus grandis HOM05D002419 ORTHO05D008128 1.9e-34 150.2 155 51.6
Nitab4.5_0000511g0130 Nicotiana tabacum HOM05D002419 ORTHO05D008128 7.8e-33 144.8 110 65.5
HPP92_005092 Vanilla planifolia HOM05D002419 ORTHO05D008128 6.6e-32 141.7 133 55.6
SGA_v2.0_scaffold25G11093 Striga asiatica HOM05D002419 ORTHO05D008128 6.2e-30 135.2 138 52.9
Zm00001eb211510 Zea mays HOM05D002419 ORTHO05D008128 1.8e-29 133.7 150 51.3
Phvul.008G171900 Phaseolus vulgaris HOM05D002419 ORTHO05D008128 1.5e-28 130.6 134 48.5
Ah.01g024490 Amaranthus hybridus HOM05D002419 ORTHO05D008128 4.4e-28 129.0 104 57.7
FvH4_3g33270 Fragaria vesca HOM05D002273 ORTHO05D008128 2.2e-27 126.7 90 61.1
FAN11G3570 Fragaria x ananassa HOM05D002273 ORTHO05D008128 2.9e-27 126.3 90 60.0
Lj2A891T18 Lonicera japonica HOM05D002419 ORTHO05D008128 3.8e-27 125.9 116 52.6
FAN21G3525 Fragaria x ananassa HOM05D002419 ORTHO05D008128 6.4e-27 125.2 91 58.2
SMO356G0194 Selaginella moellendorffii HOM05D002419 ORTHO05D008128 6.4e-27 125.2 135 47.4
CBR_g17117 Chara braunii HOM05D002419 ORTHO05D008128 8.4e-27 124.8 135 40.7
unitig_699.g19262 Utricularia gibba HOM05D001486 ORTHO05D003845 8.4e-27 124.8 128 47.7
Pp3c27_1710 Physcomitrium patens HOM05D002419 ORTHO05D008128 1.9e-26 123.6 131 47.3
MSTRG.17782 Avicennia marina HOM05D002419 ORTHO05D008128 7.1e-26 121.7 105 55.2
Mapoly0013s0067 Marchantia polymorpha HOM05D002419 ORTHO05D008128 2.1e-22 110.2 118 47.5
Zm00001eb088630 Zea mays HOM05D002419 ORTHO05D008128 3.6e-22 109.4 101 56.4
AUR62035785 Chenopodium quinoa HOM05D002419 ORTHO05D008128 2.4e-21 106.7 76 65.8
AagrBONN_evm.TU.Sc2ySwM_228.5883 Anthoceros agrestis HOM05D002419 ORTHO05D008128 9.9e-20 101.3 104 49.0
MELO3C025746.2 Cucumis melo HOM05D002419 ORTHO05D008128 1.4e-18 97.4 66 65.2
AagrBONN_evm.TU.Sc2ySwM_228.5888 Anthoceros agrestis HOM05D002419 ORTHO05D008128 7.1e-18 95.1 130 41.5
Sed0027804 Sechium edule HOM05D002419 ORTHO05D008128 2.1e-17 93.6 131 38.2
BcaB01g04653 Brassica carinata HOM05D002419 ORTHO05D008128 5.6e-15 85.5 65 58.5
MCO16G180 Micromonas commoda HOM05D002419 ORTHO05D008128 1.1e-13 81.3 76 53.9
CARHR181070 Cardamine hirsuta HOM05D002419 ORTHO05D008128 2.0e-12 77.0 64 59.4
PRCOL_00002156 Prasinoderma coloniale HOM05D002419 ORTHO05D008128 2.0e-12 77.0 133 35.3
BcaB01g04652 Brassica carinata HOM05D000125 ORTHO05D008128 4.5e-12 75.9 76 51.3
Cre12.g560100 Chlamydomonas reinhardtii HOM05D002419 ORTHO05D008128 9.9e-12 74.7 70 50.0
MD11G1130200 Malus domestica HOM05D005177 ORTHO05D008128 8.7e-08 61.6 65 46.2
Actinidia20438 Actinidia chinensis HOM05D002419 ORTHO05D008128 6.2e-06 55.5 50 50.0


User provided reference genes

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