Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0680G180 Amborella trichopoda HOM05D006391 ORTHO05D007767 2.6e-217 758.4 392 100.0
Nn1g02693 Nelumbo nucifera HOM05D006391 ORTHO05D007767 1.3e-134 483.8 400 66.8
MBI17_g17506_MAGBIO Magnolia biondii HOM05D006391 ORTHO05D007767 2.6e-132 476.1 399 67.4
TAR636G3322 Trochodendron aralioides HOM05D001448 ORTHO05D005781 4.9e-131 471.9 403 65.8
Atru.chr2.892 Acer truncatum HOM05D006391 ORTHO05D007767 2.8e-126 456.1 399 63.2
CANSAT54G0018 Cannabis sativa HOM05D006391 ORTHO05D007767 8.1e-126 454.5 394 64.0
Gohir.A11G251400 Gossypium hirsutum HOM05D006391 ORTHO05D007767 6.9e-125 451.4 409 60.9
Potri.013G044600 Populus trichocarpa HOM05D006391 ORTHO05D007767 9.0e-125 451.1 407 62.7
Gorai.007G280500 Gossypium raimondii HOM05D006391 ORTHO05D007767 3.4e-124 449.1 410 60.7
Sopen11g002020 Solanum pennellii HOM05D006391 ORTHO05D007767 3.4e-124 449.1 398 63.1
Gohir.D11G261800 Gossypium hirsutum HOM05D006391 ORTHO05D007767 7.6e-124 448.0 409 60.6
CiPaw.07G078100 Carya illinoinensis HOM05D006391 ORTHO05D007767 9.9e-124 447.6 409 60.9
COL.COLO4_15424 Corchorus olitorius HOM05D006391 ORTHO05D007767 2.2e-123 446.4 410 60.7
Sabra13G0041000 Salix brachista HOM05D006391 ORTHO05D007767 6.4e-123 444.9 406 62.3
Manes.08G137500 Manihot esculenta HOM05D006391 ORTHO05D007767 1.9e-122 443.4 409 62.6
Thecc.05G276300 Theobroma cacao HOM05D006391 ORTHO05D007767 1.9e-122 443.4 410 61.0
Cfa006327 Carpinus fangiana HOM05D006391 ORTHO05D007767 5.5e-122 441.8 408 61.3
Glyma.20G222100 Glycine max HOM05D006391 ORTHO05D007767 5.5e-122 441.8 401 60.1
PSO832G3851 Papaver somniferum HOM05D006391 ORTHO05D007767 9.3e-122 441.0 401 63.1
Solyc11g006080.2 Solanum lycopersicum HOM05D006391 ORTHO05D007767 2.1e-121 439.9 400 62.0
TWI56G1126 Tripterygium wilfordii HOM05D006391 ORTHO05D007767 4.6e-121 438.7 397 61.0
Sc09g0004120 Simmondsia chinensis HOM05D006391 ORTHO05D007767 6.0e-121 438.3 411 59.1
PGR004G0019 Punica granatum HOM05D006391 ORTHO05D007767 1.3e-120 437.2 411 57.9
PGSC0003DMG400028690 Solanum tuberosum HOM05D006391 ORTHO05D007767 2.3e-120 436.4 398 61.8
GSVIVG01036208001 Vitis vinifera HOM05D006391 ORTHO05D007767 2.3e-120 436.4 407 60.7
Duzib177G0389 Durio zibethinus HOM05D006391 ORTHO05D007767 5.1e-120 435.3 410 59.3
Eucgr.H04256 Eucalyptus grandis HOM05D006391 ORTHO05D007767 8.7e-120 434.5 417 60.4
Ciclev10020524m.g Citrus clementina HOM05D006391 ORTHO05D007767 1.1e-119 434.1 395 61.0
Medtr1g079830 Medicago truncatula HOM05D006391 ORTHO05D007767 1.9e-119 433.3 402 60.2
Aqoxy5G00275 Aquilegia oxysepala HOM05D006391 ORTHO05D007767 4.3e-119 432.2 402 61.4
QL03p031977 Quercus lobata HOM05D006391 ORTHO05D007767 5.6e-119 431.8 406 61.1
Actinidia06783 Actinidia chinensis HOM05D006391 ORTHO05D007767 7.4e-119 431.4 404 60.9
Cc02_g09040 Coffea canephora HOM05D006391 ORTHO05D007767 2.8e-118 429.5 408 59.6
Lj2A39G66 Lonicera japonica HOM05D006391 ORTHO05D007767 2.8e-118 429.5 358 65.1
CsaV3_1G045530 Cucumis sativus L. HOM05D006391 ORTHO05D007767 4.8e-118 428.7 402 59.7
Lj5g0002062 Lotus japonicus HOM05D006391 ORTHO05D007767 6.2e-118 428.3 400 60.0
Dinv14621 Davidia involucrata HOM05D006391 ORTHO05D007767 2.4e-117 426.4 398 61.1
Lalb_Chr21g0311261 Lupinus albus HOM05D006391 ORTHO05D007767 3.1e-117 426.0 395 60.8
Glyma.10G167000 Glycine max HOM05D006391 ORTHO05D007767 4.0e-117 425.6 355 64.2
PSO210G7203 Papaver somniferum HOM05D006391 ORTHO05D007767 4.0e-117 425.6 399 61.2
VMungo0720G1212 Vigna mungo HOM05D006391 ORTHO05D007767 5.3e-117 425.2 419 58.0
Ca_10006_v3 Cicer arietinum L. HOM05D006391 ORTHO05D007767 6.9e-117 424.9 408 58.1
Prupe.6G348300 Prunus persica HOM05D006391 ORTHO05D007767 4.5e-116 422.2 422 56.9
Nitab4.5_0004928g0020 Nicotiana tabacum HOM05D006391 ORTHO05D007767 1.7e-115 420.2 408 60.0
Peaxi162Scf00120g00213 Petunia axillaris HOM05D006391 ORTHO05D007767 2.2e-115 419.9 410 59.3
Phvul.L001863 Phaseolus vulgaris HOM05D006391 ORTHO05D007767 2.2e-115 419.9 420 56.4
Nitab4.5_0000856g0160 Nicotiana tabacum HOM05D006391 ORTHO05D007767 2.9e-115 419.5 402 60.2
MD12G1245500 Malus domestica HOM05D006391 ORTHO05D007767 1.6e-113 413.7 422 56.2
TPR.G10279 Trifolium pratense HOM05D006391 ORTHO05D007767 2.1e-113 413.3 396 59.8
AUR62004876 Chenopodium quinoa HOM05D006391 ORTHO05D007767 6.0e-113 411.8 414 57.7
SalBow3G3308 Salvia bowleyana HOM05D006391 ORTHO05D007767 6.0e-113 411.8 400 56.8
AUR62037609 Chenopodium quinoa HOM05D006391 ORTHO05D007767 7.9e-113 411.4 414 58.2
arahy.Tifrunner.gnm1.ann1.DTTE32 Arachis hypogaea HOM05D006391 ORTHO05D007767 1.3e-112 410.6 406 57.9
ECA233G2464 Erigeron canadensis HOM05D006391 ORTHO05D007767 1.8e-112 410.2 401 58.1
arahy.Tifrunner.gnm1.ann1.9EWV20 Arachis hypogaea HOM05D006391 ORTHO05D007767 2.3e-112 409.8 410 57.1
DCAR_028379 Daucus carota HOM05D006391 ORTHO05D007767 2.3e-112 409.8 334 65.9
Migut.F00812 Erythranthe guttata HOM05D006391 ORTHO05D007767 1.5e-111 407.1 394 59.1
Thhalv10020805m.g Eutrema salsugineum HOM05D006391 ORTHO05D007767 1.5e-111 407.1 423 54.8
Sed0026137 Sechium edule HOM05D006391 ORTHO05D007767 1.9e-111 406.8 404 57.9
Aa31LG5G14980 Aethionema arabicum HOM05D006391 ORTHO05D007767 3.3e-111 406.0 431 54.8
FAN05G3173 Fragaria x ananassa HOM05D006391 ORTHO05D007767 3.3e-111 406.0 423 55.1
vmacro20003 Vaccinium macrocarpon HOM05D006391 ORTHO05D007767 4.3e-111 405.6 422 55.2
AT3G04560 Arabidopsis thaliana HOM05D006391 ORTHO05D007767 7.4e-111 404.8 421 54.9
CAN.G582.18 Capsicum annuum HOM05D006391 ORTHO05D007767 7.4e-111 404.8 355 64.5
HanXRQChr08g0225371 Helianthus annuus HOM05D006391 ORTHO05D007767 9.6e-111 404.4 406 57.1
EL10Ac4g09055 Beta vulgaris HOM05D006391 ORTHO05D007767 1.3e-110 404.1 399 56.9
FAN05G1344 Fragaria x ananassa HOM05D006391 ORTHO05D007767 1.3e-110 404.1 423 54.8
AL3G14580 Arabidopsis lyrata HOM05D006391 ORTHO05D007767 1.6e-110 403.7 417 55.4
FAN09G3726 Fragaria x ananassa HOM05D006391 ORTHO05D007767 1.6e-110 403.7 425 54.4
THA.LOC104827288 Tarenaya hassleriana HOM05D006391 ORTHO05D007767 2.8e-110 402.9 425 54.1
Lsat_1_v5_gn_8_2721 Lactuca sativa HOM05D006391 ORTHO05D007767 3.7e-110 402.5 404 57.4
Carub.0003s0371 Capsella rubella HOM05D006391 ORTHO05D007767 9.0e-109 397.9 422 53.8
RcHm_v2.0_Chr3g0450061 Rosa chinensis HOM05D006391 ORTHO05D007767 1.2e-108 397.5 427 54.1
Sed0023982 Sechium edule HOM05D006391 ORTHO05D007767 1.5e-108 397.1 402 58.0
AUR62001083 Chenopodium quinoa HOM05D006391 ORTHO05D007767 3.4e-108 396.0 438 54.8
FAN02G0817 Fragaria x ananassa HOM05D006391 ORTHO05D007767 3.4e-108 396.0 423 53.9
BolC5t34924H Brassica oleracea HOM05D006391 ORTHO05D007767 5.9e-108 395.2 420 54.8
BcaC05g30188 Brassica carinata HOM05D006391 ORTHO05D007767 6.5e-107 391.7 420 53.8
Sed0020342 Sechium edule HOM05D006391 ORTHO05D007767 1.9e-106 390.2 401 54.9
Rhsim05G0175400 Rhododendron simsii HOM05D006391 ORTHO05D007767 2.5e-106 389.8 415 54.7
CSS0020771 Camellia sinensis var. sinensis HOM05D006391 ORTHO05D007767 5.5e-106 388.7 397 56.7
Sp3g03400 Schrenkiella parvula HOM05D006391 ORTHO05D007767 5.5e-106 388.7 431 52.7
MELO3C024661.2 Cucumis melo HOM05D006391 ORTHO05D007767 1.6e-105 387.1 436 53.2
ClCG06G009350 Citrullus lanatus HOM05D006391 ORTHO05D007767 2.7e-105 386.3 336 61.9
Haze_04461 Corylus avellana HOM05D006391 ORTHO05D007767 2.7e-105 386.3 521 47.2
FAN14G3605 Fragaria x ananassa HOM05D006391 ORTHO05D007767 2.7e-105 386.3 428 53.3
unitig_32.g11831 Utricularia gibba HOM05D006391 ORTHO05D007767 3.0e-104 382.9 419 52.0
FvH4_6g02310 Fragaria vesca HOM05D006391 ORTHO05D007767 5.1e-104 382.1 428 53.0
BraA05t23038Z Brassica rapa HOM05D006391 ORTHO05D007767 6.7e-104 381.7 421 53.2
FAN14G5548 Fragaria x ananassa HOM05D006391 ORTHO05D007767 6.7e-104 381.7 428 52.8
Hund22148 Selenicereus undatus HOM05D006391 ORTHO05D007767 1.9e-103 380.2 348 60.6
CARHR078730 Cardamine hirsuta HOM05D006391 ORTHO05D007767 2.5e-103 379.8 429 52.0
Os02g0820600 Oryza sativa ssp. japonica HOM05D006391 ORTHO05D007767 2.2e-102 376.7 377 57.3
SEGI_17356 Sequoiadendron giganteum HOM05D006391 ORTHO05D007767 3.1e-101 372.9 337 60.5
C05p62710 Brassica napus HOM05D006391 ORTHO05D007767 3.8e-99 365.9 418 52.2
BcaC05g29933 Brassica carinata HOM05D006391 ORTHO05D007767 8.5e-99 364.8 418 51.9
Zm00001eb259140 Zea mays HOM05D006391 ORTHO05D007767 3.0e-96 356.3 327 59.9
A05p42930 Brassica napus HOM05D006391 ORTHO05D007767 1.1e-93 347.8 422 49.8
CDE04G1237 Ceratophyllum demersum HOM05D006391 ORTHO05D007767 2.6e-92 343.2 311 61.1
Ah.04g163310 Amaranthus hybridus HOM05D006391 ORTHO05D007767 3.8e-91 339.3 411 51.3
SGA_v2.0_scaffold243G44310 Striga asiatica HOM05D006391 ORTHO05D007767 1.6e-84 317.4 352 53.1
Pp3c19_8680 Physcomitrium patens HOM05D006391 ORTHO05D007767 1.9e-82 310.5 392 48.0
Cpa.g.sc162.14 Carica papaya HOM05D006391 ORTHO05D007767 9.7e-79 298.1 325 54.5
HPP92_007146 Vanilla planifolia HOM05D006391 ORTHO05D007767 4.8e-78 295.8 266 59.8
MD04G1228400 Malus domestica HOM05D006391 ORTHO05D007767 1.1e-77 294.7 269 58.0
Mapoly0044s0074 Marchantia polymorpha HOM05D006391 ORTHO05D007767 2.0e-76 290.4 408 45.6
SMO203G0061 Selaginella moellendorffii HOM05D006391 ORTHO05D007767 2.1e-73 280.4 331 48.0
HPP92_007142 Vanilla planifolia HOM05D006391 ORTHO05D007767 1.4e-69 267.7 297 53.9
Psat6g143040 Pisum sativum HOM05D006391 ORTHO05D007767 2.7e-68 263.5 315 50.8
Oeu034581.1 Olea europaea HOM05D006391 ORTHO05D007767 3.5e-60 236.5 211 62.6
CBR_g8309 Chara braunii HOM05D006391 ORTHO05D007767 2.0e-55 220.7 381 38.3
QL03p032009 Quercus lobata HOM05D006391 ORTHO05D007767 8.6e-43 178.7 129 70.5
SHI23187 Sapria himalayana HOM05D006391 ORTHO05D007767 7.3e-42 175.6 193 53.4
Oeu058337.1 Olea europaea HOM05D006391 ORTHO05D007767 1.2e-39 168.3 132 66.7
HPP92_007141 Vanilla planifolia HOM05D006391 ORTHO05D007767 1.1e-34 151.8 87 81.6
Cre02.g105450 Chlamydomonas reinhardtii HOM05D006391 ORTHO05D007767 5.6e-26 122.9 484 26.2
MCO07G609 Micromonas commoda HOM05D006391 ORTHO05D007767 3.6e-25 120.2 358 28.5
BcaB04g19320 Brassica carinata HOM05D006391 ORTHO05D007767 4.8e-17 93.2 86 62.8
MD04G1228300 Malus domestica HOM05D006391 ORTHO05D007767 1.7e-14 84.7 72 68.1
PRCOL_00004538 Prasinoderma coloniale HOM05D006391 ORTHO05D007767 3.5e-12 77.0 324 24.7
BolC3t13192H Brassica oleracea HOM05D006391 ORTHO05D007767 7.4e-10 69.3 164 31.1
BcaC02g11594 Brassica carinata HOM05D006391 ORTHO05D007767 1.6e-09 68.2 60 56.7
BolC5t34511H Brassica oleracea HOM05D004842 ORTHO05D005929 1.8e-08 64.7 46 65.2
C03p06830 Brassica napus HOM05D006391 ORTHO05D007767 3.1e-08 63.9 153 30.7
BolC3t17856H Brassica oleracea HOM05D004842 ORTHO05D005929 3.1e-08 63.9 46 63.0
CDE06G2524 Ceratophyllum demersum HOM05D006391 ORTHO05D007767 6.9e-08 62.8 82 46.3


User provided reference genes

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