Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0680G179 Amborella trichopoda HOM05D007351 ORTHO05D009386 3.3e-115 418.3 198 100.0
PSO017G1621 Papaver somniferum HOM05D007351 ORTHO05D009386 3.4e-80 302.0 169 81.7
PSO170G0157 Papaver somniferum HOM05D007351 ORTHO05D009386 4.4e-80 301.6 169 81.1
Nn2g11909 Nelumbo nucifera HOM05D007351 ORTHO05D009386 8.4e-79 297.4 169 82.8
MBI04_g00950_MAGBIO Magnolia biondii HOM05D007351 ORTHO05D009386 4.2e-78 295.0 169 82.2
CSS0046405 Camellia sinensis var. sinensis HOM05D007351 ORTHO05D009386 2.7e-77 292.4 180 78.9
Sabra06G0194800 Salix brachista HOM05D007351 ORTHO05D009386 3.5e-77 292.0 200 72.0
TAR625G1337 Trochodendron aralioides HOM05D007351 ORTHO05D009386 3.5e-77 292.0 169 81.1
Potri.006G249000 Populus trichocarpa HOM05D007351 ORTHO05D009386 4.6e-77 291.6 169 81.1
TWI34G1290 Tripterygium wilfordii HOM05D007351 ORTHO05D009386 4.6e-77 291.6 170 80.6
CDE06G1133 Ceratophyllum demersum HOM05D007351 ORTHO05D009386 6.0e-77 291.2 174 78.7
COL.COLO4_24001 Corchorus olitorius HOM05D007351 ORTHO05D009386 7.9e-77 290.8 168 79.8
BcaC02g08337 Brassica carinata HOM05D007351 ORTHO05D009386 1.7e-76 289.7 170 80.6
A04p19820 Brassica napus HOM05D007351 ORTHO05D009386 1.7e-76 289.7 170 80.6
C04p55560 Brassica napus HOM05D007351 ORTHO05D009386 1.7e-76 289.7 170 80.6
BolC4t27080H Brassica oleracea HOM05D007351 ORTHO05D009386 1.7e-76 289.7 170 80.6
BraA04t17570Z Brassica rapa HOM05D007351 ORTHO05D009386 1.7e-76 289.7 170 80.6
CARHR115710 Cardamine hirsuta HOM05D007351 ORTHO05D009386 2.3e-76 289.3 170 81.2
GSVIVG01035772001 Vitis vinifera HOM05D007351 ORTHO05D009386 3.0e-76 288.9 170 80.6
AT2G25605 Arabidopsis thaliana HOM05D007351 ORTHO05D009386 3.9e-76 288.5 170 80.0
EL10Ac2g02569 Beta vulgaris HOM05D007351 ORTHO05D009386 3.9e-76 288.5 192 73.4
BcaB06g28079 Brassica carinata HOM05D007351 ORTHO05D009386 5.1e-76 288.1 170 80.0
Cpa.g.sc91.32 Carica papaya HOM05D007351 ORTHO05D009386 5.1e-76 288.1 179 78.2
Eucgr.C01805 Eucalyptus grandis HOM05D007351 ORTHO05D009386 5.1e-76 288.1 180 78.9
Thhalv10000330m.g Eutrema salsugineum HOM05D007351 ORTHO05D009386 5.1e-76 288.1 169 80.5
Carub.0004s0533 Capsella rubella HOM05D007351 ORTHO05D009386 8.7e-76 287.3 170 80.6
Hund03010 Selenicereus undatus HOM05D007351 ORTHO05D009386 8.7e-76 287.3 169 79.9
Gorai.004G110800 Gossypium raimondii HOM05D007351 ORTHO05D009386 1.9e-75 286.2 198 70.2
Prupe.1G471900 Prunus persica HOM05D007351 ORTHO05D009386 1.9e-75 286.2 169 79.9
CiPaw.08G014100 Carya illinoinensis HOM05D007351 ORTHO05D009386 2.5e-75 285.8 179 77.7
Thecc.09G147600 Theobroma cacao HOM05D007351 ORTHO05D009386 2.5e-75 285.8 168 80.4
Actinidia15698 Actinidia chinensis HOM05D007351 ORTHO05D009386 1.3e-74 283.5 169 80.5
Gohir.A08G090000 Gossypium hirsutum HOM05D007351 ORTHO05D009386 1.3e-74 283.5 199 69.8
Atru.chr7.2359 Acer truncatum HOM05D007351 ORTHO05D009386 1.6e-74 283.1 172 77.9
AL4G17070 Arabidopsis lyrata HOM05D007351 ORTHO05D009386 1.6e-74 283.1 170 78.8
Ciclev10009550m.g Citrus clementina HOM05D007351 ORTHO05D009386 2.1e-74 282.7 170 79.4
Hma1.2p1_0000F.1_g000940 Hydrangea macrophylla HOM05D007351 ORTHO05D009386 3.6e-74 282.0 179 74.3
Lj8A616G46 Lonicera japonica HOM05D007351 ORTHO05D009386 3.6e-74 282.0 175 77.1
Manes.16G118400 Manihot esculenta HOM05D007351 ORTHO05D009386 3.6e-74 282.0 169 78.7
FvH4_2g29770 Fragaria vesca HOM05D007351 ORTHO05D009386 4.8e-74 281.6 174 74.7
Sc06g0000580 Simmondsia chinensis HOM05D007351 ORTHO05D009386 6.2e-74 281.2 169 78.7
MD08G1141900 Malus domestica HOM05D007351 ORTHO05D009386 8.1e-74 280.8 169 78.7
RcHm_v2.0_Chr6g0298791 Rosa chinensis HOM05D007351 ORTHO05D009386 1.8e-73 279.6 169 77.5
THA.LOC104804500 Tarenaya hassleriana HOM05D007351 ORTHO05D009386 1.8e-73 279.6 170 79.4
arahy.Tifrunner.gnm1.ann1.C4YKET Arachis hypogaea HOM05D007351 ORTHO05D009386 3.1e-73 278.9 173 74.6
FAN24G0983 Fragaria x ananassa HOM05D007351 ORTHO05D009386 3.1e-73 278.9 169 77.5
FAN27G2935 Fragaria x ananassa HOM05D007351 ORTHO05D009386 3.1e-73 278.9 169 77.5
FAN15G3188 Fragaria x ananassa HOM05D007351 ORTHO05D009386 4.0e-73 278.5 169 77.5
Aa31sc586G10 Aethionema arabicum HOM05D007351 ORTHO05D009386 5.3e-73 278.1 170 77.1
MSTRG.11754 Avicennia marina HOM05D007351 ORTHO05D009386 9.0e-73 277.3 179 75.4
AUR62032351 Chenopodium quinoa HOM05D007351 ORTHO05D009386 1.2e-72 276.9 180 75.0
PGSC0003DMG400007382 Solanum tuberosum HOM05D007351 ORTHO05D009386 2.0e-72 276.2 184 72.3
Medtr3g107860 Medicago truncatula HOM05D007351 ORTHO05D009386 3.4e-72 275.4 195 69.2
Lalb_Chr23g0268831 Lupinus albus HOM05D007351 ORTHO05D009386 5.8e-72 274.6 169 76.3
Cc11_g01660 Coffea canephora HOM05D007351 ORTHO05D009386 9.9e-72 273.9 195 69.2
Aqoxy7G02003 Aquilegia oxysepala HOM05D007351 ORTHO05D009386 1.3e-71 273.5 189 70.9
Ca_15711_v3 Cicer arietinum L. HOM05D007351 ORTHO05D009386 2.9e-71 272.3 162 78.4
SGA_v2.0_scaffold448G51771 Striga asiatica HOM05D007351 ORTHO05D009386 2.9e-71 272.3 189 72.0
Nitab4.5_0000508g0220 Nicotiana tabacum HOM05D007351 ORTHO05D009386 3.8e-71 271.9 188 69.1
Solyc08g067430.4 Solanum lycopersicum HOM05D007351 ORTHO05D009386 3.8e-71 271.9 171 76.0
Migut.A00300 Erythranthe guttata HOM05D007351 ORTHO05D009386 6.4e-71 271.2 181 73.5
HanXRQChr13g0402411 Helianthus annuus HOM05D007351 ORTHO05D009386 8.4e-71 270.8 169 76.3
Psat5g027160 Pisum sativum HOM05D007351 ORTHO05D009386 8.4e-71 270.8 162 77.8
Peaxi162Scf00251g01128 Petunia axillaris HOM05D007351 ORTHO05D009386 1.1e-70 270.4 179 72.6
Glyma.06G071600 Glycine max HOM05D007351 ORTHO05D009386 1.4e-70 270.0 177 71.8
Phvul.009G096100 Phaseolus vulgaris HOM05D007351 ORTHO05D009386 1.4e-70 270.0 162 77.8
Lj1g0014043 Lotus japonicus HOM05D007351 ORTHO05D009386 9.3e-70 267.3 162 76.5
arahy.Tifrunner.gnm1.ann1.8MNE4Q Arachis hypogaea HOM05D007351 ORTHO05D009386 1.2e-69 266.9 194 67.0
ECA233G0102 Erigeron canadensis HOM05D007351 ORTHO05D009386 1.2e-69 266.9 168 73.8
Rhsim07G0150700 Rhododendron simsii HOM05D007351 ORTHO05D009386 2.1e-69 266.2 182 73.1
Glyma.04G069700 Glycine max HOM05D007351 ORTHO05D009386 6.0e-69 264.6 169 72.8
TPR.G27335 Trifolium pratense HOM05D007351 ORTHO05D009386 7.9e-69 264.2 165 73.9
Lsat_1_v5_gn_6_21681 Lactuca sativa HOM05D007351 ORTHO05D009386 1.3e-68 263.5 168 75.6
vmacro05202 Vaccinium macrocarpon HOM05D007351 ORTHO05D009386 2.3e-68 262.7 153 81.0
MELO3C003678.2 Cucumis melo HOM05D007351 ORTHO05D009386 3.0e-68 262.3 162 74.7
Os05g0574700 Oryza sativa ssp. japonica HOM05D007351 ORTHO05D009386 3.0e-68 262.3 194 66.5
Sopen08g021360 Solanum pennellii HOM05D007351 ORTHO05D009386 3.9e-68 261.9 176 72.2
Sed0005695 Sechium edule HOM05D007351 ORTHO05D009386 5.1e-68 261.5 169 72.2
Nitab4.5_0002339g0070 Nicotiana tabacum HOM05D007351 ORTHO05D009386 6.7e-68 261.2 191 67.5
SEGI_27006 Sequoiadendron giganteum HOM05D007351 ORTHO05D009386 1.9e-67 259.6 170 72.9
AUR62041846 Chenopodium quinoa HOM05D007351 ORTHO05D009386 9.6e-67 257.3 164 76.2
unitig_32.g11667 Utricularia gibba HOM05D007351 ORTHO05D009386 3.7e-66 255.4 169 73.4
Mapoly0036s0071 Marchantia polymorpha HOM05D007351 ORTHO05D009386 4.5e-64 248.4 162 71.6
Sp4g05090 Schrenkiella parvula HOM05D007351 ORTHO05D009386 2.9e-63 245.7 140 81.4
VMungo1309G2796 Vigna mungo HOM05D007351 ORTHO05D009386 2.1e-61 239.6 141 78.7
Duzib150G1343 Durio zibethinus HOM05D007351 ORTHO05D009386 7.9e-61 237.7 141 80.9
CsaV3_3G046600 Cucumis sativus L. HOM05D007351 ORTHO05D009386 1.8e-60 236.5 141 76.6
Gohir.D08G102800 Gossypium hirsutum HOM05D007351 ORTHO05D009386 1.5e-59 233.4 174 68.4
Pp3c17_16830 Physcomitrium patens HOM05D007351 ORTHO05D009386 4.3e-59 231.9 162 67.3
SMO269G0024 Selaginella moellendorffii HOM05D007351 ORTHO05D009386 4.3e-59 231.9 162 67.3
QL12p031742 Quercus lobata HOM05D007351 ORTHO05D009386 6.3e-58 228.0 148 73.0
AagrBONN_evm.TU.Sc2ySwM_228.1243 Anthoceros agrestis HOM05D007351 ORTHO05D009386 8.2e-58 227.6 152 72.4
PGR031G1798 Punica granatum HOM05D007351 ORTHO05D009386 1.1e-57 227.3 137 79.6
Zm00001eb344390 Zea mays HOM05D007351 ORTHO05D009386 5.3e-57 224.9 163 66.3
DCAR_003046 Daucus carota HOM05D007351 ORTHO05D009386 2.2e-55 219.5 167 67.1
Haze_21592 Corylus avellana HOM05D007351 ORTHO05D009386 2.7e-53 212.6 111 88.3
CANSAT11G2455 Cannabis sativa HOM05D007351 ORTHO05D009386 5.1e-52 208.4 196 54.6
Oeu045191.1 Olea europaea HOM05D007351 ORTHO05D009386 1.9e-51 206.5 167 64.7
CBR_g40414 Chara braunii HOM05D007351 ORTHO05D009386 7.7e-48 194.5 169 56.8
CANSAT54G2502 Cannabis sativa HOM05D007351 ORTHO05D009386 3.0e-36 156.0 167 49.7
Cre17.g746897 Chlamydomonas reinhardtii HOM05D007351 ORTHO05D009386 1.2e-29 134.0 136 48.5
Pp3c16_22900 Physcomitrium patens HOM05D033550 ORTHO05D017832 1.3e-10 70.9 134 36.6
vmacro05206 Vaccinium macrocarpon HOM05D007351 ORTHO05D009386 1.7e-10 70.5 165 32.1
Cre16.g683300 Chlamydomonas reinhardtii HOM05D027270 ORTHO05D017832 7.7e-08 61.6 131 32.8
Lsat_1_v5_gn_4_127141 Lactuca sativa HOM05D007351 ORTHO05D009386 1.0e-07 61.2 36 72.2
Mapoly0006s0206 Marchantia polymorpha HOM05D017363 ORTHO05D018319 2.9e-07 59.7 164 23.2
SEGI_25541 Sequoiadendron giganteum HOM05D007351 ORTHO05D017832 2.9e-07 59.7 138 31.9


User provided reference genes

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