Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0680G174 Amborella trichopoda HOM05D005443 ORTHO05D009021 9.9e-65 250.0 128 100.0
MBI18_g16995_MAGBIO Magnolia biondii HOM05D005443 ORTHO05D009021 6.1e-30 134.4 123 56.1
TAR629G1996 Trochodendron aralioides HOM05D005443 ORTHO05D009021 7.9e-30 134.0 130 53.8
GSVIVG01020531001 Vitis vinifera HOM05D005443 ORTHO05D009021 6.7e-29 131.0 129 50.4
Manes.12G087400 Manihot esculenta HOM05D005443 ORTHO05D009021 7.4e-28 127.5 126 51.6
Actinidia11040 Actinidia chinensis HOM05D005443 ORTHO05D009021 1.3e-27 126.7 130 50.0
HPP92_025995 Vanilla planifolia HOM05D005443 ORTHO05D009021 1.7e-27 126.3 130 50.8
Prupe.3G135600 Prunus persica HOM05D005443 ORTHO05D009021 3.7e-27 125.2 130 50.0
QL08p038456 Quercus lobata HOM05D005443 ORTHO05D009021 8.2e-27 124.0 124 50.0
Sabra19G0111200 Salix brachista HOM05D005443 ORTHO05D009021 1.1e-26 123.6 130 48.5
FAN02G0200 Fragaria x ananassa HOM05D005443 ORTHO05D009021 2.4e-26 122.5 129 48.1
FvH4_6g26140 Fragaria vesca HOM05D005443 ORTHO05D009021 3.1e-26 122.1 129 48.1
Nitab4.5_0002526g0090 Nicotiana tabacum HOM05D005443 ORTHO05D009021 3.1e-26 122.1 126 47.6
TWI75G0884 Tripterygium wilfordii HOM05D005443 ORTHO05D009021 3.1e-26 122.1 128 49.2
ClCG07G002990 Citrullus lanatus HOM05D000092 ORTHO05D009021 5.3e-26 121.3 129 47.3
Nitab4.5_0000512g0150 Nicotiana tabacum HOM05D005443 ORTHO05D009021 1.2e-25 120.2 123 48.0
PGSC0003DMG400018348 Solanum tuberosum HOM05D005443 ORTHO05D009021 1.2e-25 120.2 130 46.2
PSO675G8511 Papaver somniferum HOM05D005443 ORTHO05D009021 2.0e-25 119.4 122 48.4
Haze_13148 Corylus avellana HOM05D005443 ORTHO05D009021 2.6e-25 119.0 130 47.7
Duzib052G1076 Durio zibethinus HOM05D005443 ORTHO05D009021 2.6e-25 119.0 130 48.5
CsaV3_7G024480 Cucumis sativus L. HOM05D005443 ORTHO05D009021 4.5e-25 118.2 122 49.2
Rhsim06G0144000 Rhododendron simsii HOM05D005443 ORTHO05D009021 1.0e-24 117.1 130 46.9
Hma1.2p1_1201F.1_g266680 Hydrangea macrophylla HOM05D005443 ORTHO05D009021 1.3e-24 116.7 123 48.0
Hma1.2p1_1201F.1_g266690 Hydrangea macrophylla HOM05D005443 ORTHO05D009021 1.3e-24 116.7 123 48.0
Cfa014595 Carpinus fangiana HOM05D005443 ORTHO05D009021 2.2e-24 115.9 130 46.2
MD09G1249200 Malus domestica HOM05D005443 ORTHO05D009021 2.2e-24 115.9 122 49.2
CSS0011007 Camellia sinensis var. sinensis HOM05D005443 ORTHO05D009021 3.8e-24 115.2 130 46.9
CSS0037968 Camellia sinensis var. sinensis HOM05D005443 ORTHO05D009021 3.8e-24 115.2 130 46.9
RcHm_v2.0_Chr2g0126191 Rosa chinensis HOM05D005443 ORTHO05D009021 3.8e-24 115.2 122 49.2
CANSAT78G0275 Cannabis sativa HOM05D005443 ORTHO05D009021 4.2e-23 111.7 129 45.7
CAN.G248.23 Capsicum annuum HOM05D005443 ORTHO05D009021 5.5e-23 111.3 120 45.0
VMungo1127G1015 Vigna mungo HOM05D005443 ORTHO05D009021 1.6e-22 109.8 125 48.0
Carub.0003s3525 Capsella rubella HOM05D005443 ORTHO05D009021 2.7e-22 109.0 128 45.3
Thecc.02G178000 Theobroma cacao HOM05D005443 ORTHO05D009021 2.7e-22 109.0 130 46.2
Atru.chr2.3463 Acer truncatum HOM05D005443 ORTHO05D009021 3.6e-22 108.6 115 50.4
Gorai.013G075400 Gossypium raimondii HOM05D005443 ORTHO05D009021 4.7e-22 108.2 121 48.8
vmacro12294 Vaccinium macrocarpon HOM05D005443 ORTHO05D009021 4.7e-22 108.2 123 47.2
Eucgr.A01810 Eucalyptus grandis HOM05D005443 ORTHO05D009021 8.0e-22 107.5 130 46.9
Gohir.A13G055900 Gossypium hirsutum HOM05D005443 ORTHO05D009021 8.0e-22 107.5 121 48.8
Sc21g0002690 Simmondsia chinensis HOM05D005443 ORTHO05D009021 8.0e-22 107.5 121 46.3
AT2G20725 Arabidopsis thaliana HOM05D005443 ORTHO05D009021 1.0e-21 107.1 129 43.4
Glyma.06G293500 Glycine max HOM05D005443 ORTHO05D009021 1.0e-21 107.1 126 46.8
Lj3g0013365 Lotus japonicus HOM05D005443 ORTHO05D009021 1.0e-21 107.1 123 44.7
Gohir.D13G066100 Gossypium hirsutum HOM05D005443 ORTHO05D009021 1.8e-21 106.3 121 47.9
HanXRQChr17g0553531 Helianthus annuus HOM05D005443 ORTHO05D009021 2.3e-21 105.9 129 45.7
AL3G53840 Arabidopsis lyrata HOM05D005443 ORTHO05D009021 3.0e-21 105.5 129 43.4
Lsat_1_v5_gn_8_133320 Lactuca sativa HOM05D005443 ORTHO05D009021 3.0e-21 105.5 130 42.3
Aqoxy1G02515 Aquilegia oxysepala HOM05D005443 ORTHO05D009021 4.0e-21 105.1 125 42.4
Phvul.011G114600 Phaseolus vulgaris HOM05D005443 ORTHO05D009021 5.2e-21 104.8 125 47.2
Thhalv10002053m.g Eutrema salsugineum HOM05D005443 ORTHO05D009021 8.8e-21 104.0 128 44.5
PGR042G2153 Punica granatum HOM05D005443 ORTHO05D009021 8.8e-21 104.0 126 43.7
arahy.Tifrunner.gnm1.ann1.Y6HWTN Arachis hypogaea HOM05D005443 ORTHO05D009021 1.1e-20 103.6 120 45.0
MELO3C024064.2 Cucumis melo HOM05D005443 ORTHO05D009021 2.6e-20 102.4 114 47.4
Migut.H01082 Erythranthe guttata HOM05D005443 ORTHO05D009021 3.3e-20 102.1 120 44.2
Dinv23652 Davidia involucrata HOM05D005443 ORTHO05D009021 4.4e-20 101.7 107 51.4
Aa31LG8G17770 Aethionema arabicum HOM05D005443 ORTHO05D009021 5.7e-20 101.3 130 42.3
Lalb_Chr19g0135291 Lupinus albus HOM05D005443 ORTHO05D009021 7.4e-20 100.9 118 44.9
Medtr0096s0020 Medicago truncatula HOM05D005443 ORTHO05D009021 7.4e-20 100.9 124 45.2
Sed0001067 Sechium edule HOM05D005443 ORTHO05D009021 9.7e-20 100.5 114 46.5
THA.LOC104814500 Tarenaya hassleriana HOM05D005443 ORTHO05D009021 1.7e-19 99.8 124 40.3
SalBow7G3189 Salvia bowleyana HOM05D005443 ORTHO05D009021 2.2e-19 99.4 122 41.0
TPR.G21753 Trifolium pratense HOM05D005443 ORTHO05D009021 2.2e-19 99.4 133 43.6
SalBow7G4211 Salvia bowleyana HOM05D005443 ORTHO05D009021 2.8e-19 99.0 122 41.0
BcaB03g16866 Brassica carinata HOM05D005443 ORTHO05D009021 8.2e-19 97.4 119 42.9
Sp3g33980 Schrenkiella parvula HOM05D005443 ORTHO05D009021 1.8e-18 96.3 129 42.6
Sopen07g028070 Solanum pennellii HOM05D005443 ORTHO05D009021 1.8e-18 96.3 114 43.9
Cc05_g07040 Coffea canephora HOM05D005443 ORTHO05D009021 3.1e-18 95.5 127 40.2
Ah.01g015220 Amaranthus hybridus HOM05D005443 ORTHO05D009021 5.3e-18 94.7 130 41.5
Peaxi162Scf00132g00415 Petunia axillaris HOM05D005443 ORTHO05D009021 1.2e-17 93.6 114 43.0
CDE11G1041 Ceratophyllum demersum HOM05D005443 ORTHO05D004488 2.0e-17 92.8 129 36.4
A07p00040 Brassica napus HOM05D005443 ORTHO05D009021 2.6e-17 92.4 116 43.1
BraA07t27796Z Brassica rapa HOM05D005443 ORTHO05D009021 3.5e-17 92.0 116 43.1
Cpa.g.sc34.150 Carica papaya HOM05D005443 ORTHO05D009021 3.5e-17 92.0 145 40.7
Sabra19G0112500 Salix brachista HOM05D005443 ORTHO05D009021 4.5e-17 91.7 205 30.7
CiPaw.04G125200 Carya illinoinensis HOM05D005443 ORTHO05D009021 5.9e-17 91.3 127 41.7
C07p00180 Brassica napus HOM05D005443 ORTHO05D009021 1.7e-16 89.7 119 40.3
BolC7t40469H Brassica oleracea HOM05D005443 ORTHO05D009021 2.2e-16 89.4 120 40.0
Ciclev10017817m.g Citrus clementina HOM05D005443 ORTHO05D009021 2.9e-16 89.0 130 40.8
SGA_v2.0_scaffold109G31118 Striga asiatica HOM05D005443 ORTHO05D009021 2.9e-16 89.0 123 38.2
Os07g0457550 Oryza sativa ssp. japonica HOM05D005443 ORTHO05D009021 3.2e-15 85.5 120 36.7
Cfa014602 Carpinus fangiana HOM05D005443 ORTHO05D009021 5.5e-15 84.7 116 42.2
Oeu017969.1 Olea europaea HOM05D005443 ORTHO05D009021 2.7e-14 82.4 107 39.3
Hund07945 Selenicereus undatus HOM05D005443 ORTHO05D009021 2.4e-10 69.3 115 32.2
COL.COLO4_07390 Corchorus olitorius HOM05D005443 ORTHO05D009021 9.1e-10 67.4 50 60.0
Nn1g04052 Nelumbo nucifera HOM05D005443 ORTHO05D009021 9.1e-10 67.4 82 47.6
BcaC06g36763 Brassica carinata HOM05D005443 ORTHO05D009021 2.0e-09 66.2 97 41.2
BcaC06g36764 Brassica carinata HOM05D005443 ORTHO05D009021 2.0e-09 66.2 97 41.2
Potri.019G101100 Populus trichocarpa HOM05D005443 ORTHO05D009021 2.7e-09 65.9 83 44.6
Pp3c3_11680 Physcomitrium patens HOM05D005443 ORTHO05D009021 4.5e-09 65.1 129 32.6
unitig_62.g23169 Utricularia gibba HOM05D005443 ORTHO05D009021 5.9e-09 64.7 119 34.5
EL10Ac9g20752 Beta vulgaris HOM05D005443 ORTHO05D009021 2.9e-08 62.4 51 51.0
Mapoly0061s0039 Marchantia polymorpha HOM05D005443 ORTHO05D009021 8.5e-08 60.8 119 32.8
Glyma.12G111866 Glycine max HOM05D005443 ORTHO05D009021 1.1e-07 60.5 68 51.5
Atru.chr2.3477 Acer truncatum HOM05D005443 ORTHO05D009021 1.5e-07 60.1 82 45.1
Ca_25912_v3 Cicer arietinum L. HOM05D005443 ORTHO05D009021 4.2e-07 58.5 49 51.0
ECA233G3734 Erigeron canadensis HOM05D005443 ORTHO05D009021 4.2e-07 58.5 78 41.0
Atru.chr6.3005 Acer truncatum HOM05D005443 ORTHO05D009021 1.6e-06 56.6 80 45.0
DCAR_016519 Daucus carota HOM05D005443 ORTHO05D009021 4.7e-06 55.1 74 41.9


User provided reference genes

Program Settings