Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0680G103 Amborella trichopoda HOM05D006219 ORTHO05D007562 6.2e-236 820.5 432 100.0
TAR633G0272 Trochodendron aralioides HOM05D006219 ORTHO05D007562 2.2e-100 370.2 456 50.7
Phvul.L001763 Phaseolus vulgaris HOM05D006219 ORTHO05D007562 1.2e-98 364.4 439 50.6
Thecc.05G275300 Theobroma cacao HOM05D006219 ORTHO05D007562 6.1e-98 362.1 452 48.9
Duzib128G1627 Durio zibethinus HOM05D006219 ORTHO05D007562 1.8e-97 360.5 444 48.4
Lj2C39T18 Lonicera japonica HOM05D006219 ORTHO05D007562 3.3e-96 356.3 432 50.2
Cpa.g.sc162.24 Carica papaya HOM05D006219 ORTHO05D007562 1.6e-95 354.0 405 51.1
Cfa006329 Carpinus fangiana HOM05D006219 ORTHO05D007562 1.4e-94 350.9 434 49.8
PSO210G1007 Papaver somniferum HOM05D006219 ORTHO05D007562 1.8e-94 350.5 415 49.4
PSO832G3978 Papaver somniferum HOM05D006219 ORTHO05D007562 1.8e-94 350.5 415 49.6
Haze_04459 Corylus avellana HOM05D006219 ORTHO05D007562 2.4e-94 350.1 434 49.5
Sc06g0004060 Simmondsia chinensis HOM05D006219 ORTHO05D007562 3.1e-94 349.7 435 50.6
CSS0036761 Camellia sinensis var. sinensis HOM05D006219 ORTHO05D007562 6.9e-94 348.6 395 51.6
Gohir.D13G107000 Gossypium hirsutum HOM05D006219 ORTHO05D007562 9.0e-94 348.2 435 47.6
CDE05G0955 Ceratophyllum demersum HOM05D006219 ORTHO05D007562 1.5e-93 347.4 411 50.6
FvH4_6g02280 Fragaria vesca HOM05D006219 ORTHO05D007562 5.9e-93 345.5 456 48.7
CiPaw.07G078300 Carya illinoinensis HOM05D006219 ORTHO05D007562 1.3e-92 344.4 454 49.1
Gorai.013G120100 Gossypium raimondii HOM05D006219 ORTHO05D007562 2.2e-92 343.6 435 47.4
TWI36G0216 Tripterygium wilfordii HOM05D006219 ORTHO05D007562 2.9e-92 343.2 397 49.4
ClCG06G009410 Citrullus lanatus HOM05D006219 ORTHO05D007562 3.8e-92 342.8 455 48.6
FAN09G4845 Fragaria x ananassa HOM05D006219 ORTHO05D007562 3.8e-92 342.8 387 51.2
Glyma.10G166900 Glycine max HOM05D006219 ORTHO05D007562 3.8e-92 342.8 450 48.0
Gohir.A13G103800 Gossypium hirsutum HOM05D006219 ORTHO05D007562 3.8e-92 342.8 400 49.5
Prupe.6G348600 Prunus persica HOM05D006219 ORTHO05D007562 5.0e-92 342.4 459 46.4
VMungo0720G3050 Vigna mungo HOM05D006219 ORTHO05D007562 5.0e-92 342.4 405 51.1
Lalb_Chr06g0168341 Lupinus albus HOM05D006219 ORTHO05D007562 6.5e-92 342.0 402 48.8
Potri.013G044900 Populus trichocarpa HOM05D006219 ORTHO05D007562 6.5e-92 342.0 419 49.4
FAN02G1274 Fragaria x ananassa HOM05D006219 ORTHO05D007562 1.4e-91 340.9 457 47.9
FAN05G4153 Fragaria x ananassa HOM05D006219 ORTHO05D007562 5.5e-91 339.0 458 47.8
Atru.chr2.897 Acer truncatum HOM05D006219 ORTHO05D007562 1.2e-90 337.8 444 47.3
HPP92_025973 Vanilla planifolia HOM05D006219 ORTHO05D007562 1.2e-90 337.8 416 50.5
MELO3C024664.2 Cucumis melo HOM05D006219 ORTHO05D007562 3.6e-90 336.3 435 49.4
FAN05G2712 Fragaria x ananassa HOM05D006219 ORTHO05D007562 4.6e-90 335.9 429 48.0
QL03p031869 Quercus lobata HOM05D006219 ORTHO05D007562 4.6e-90 335.9 393 49.9
QL08p015782 Quercus lobata HOM05D006219 ORTHO05D007562 4.6e-90 335.9 393 50.1
PGR004G0430 Punica granatum HOM05D006219 ORTHO05D007562 6.1e-90 335.5 408 50.0
Manes.09G149100 Manihot esculenta HOM05D006219 ORTHO05D007562 1.0e-89 334.7 404 49.5
Aqoxy5G00261 Aquilegia oxysepala HOM05D006219 ORTHO05D007562 1.4e-89 334.3 397 50.4
Sabra13G0041300 Salix brachista HOM05D006219 ORTHO05D007562 3.0e-89 333.2 400 49.0
CsaV3_1G045560 Cucumis sativus L. HOM05D006219 ORTHO05D007562 3.9e-89 332.8 430 49.1
Lj5g0004576 Lotus japonicus HOM05D006219 ORTHO05D007562 8.8e-89 331.6 415 47.5
HanXRQChr14g0458931 Helianthus annuus HOM05D006219 ORTHO05D007562 2.5e-88 330.1 448 45.1
CANSAT54G2996 Cannabis sativa HOM05D006219 ORTHO05D007562 5.7e-88 328.9 441 46.3
DCAR_030973 Daucus carota HOM05D006219 ORTHO05D007562 7.4e-88 328.6 404 49.5
AL6G40560 Arabidopsis lyrata HOM05D006219 ORTHO05D007562 2.2e-87 327.0 397 48.9
Medtr1g079870 Medicago truncatula HOM05D006219 ORTHO05D007562 2.2e-87 327.0 390 48.7
MD12G1245900 Malus domestica HOM05D006219 ORTHO05D007562 2.8e-87 326.6 456 46.1
BcaNung01728 Brassica carinata HOM05D006219 ORTHO05D007562 2.4e-86 323.6 414 47.3
CARHR185150 Cardamine hirsuta HOM05D006219 ORTHO05D007562 2.4e-86 323.6 396 49.0
CDE08G1514 Ceratophyllum demersum HOM05D006219 ORTHO05D007562 2.4e-86 323.6 402 49.5
THA.LOC104799246 Tarenaya hassleriana HOM05D006219 ORTHO05D007562 1.2e-85 321.2 456 45.0
Sp2g20170 Schrenkiella parvula HOM05D006219 ORTHO05D007562 1.5e-85 320.9 449 45.9
AUR62037607 Chenopodium quinoa HOM05D006219 ORTHO05D007562 5.9e-85 318.9 395 48.6
Ca_10007_v3 Cicer arietinum L. HOM05D006219 ORTHO05D007562 5.9e-85 318.9 391 46.5
Lsat_1_v5_gn_2_107721 Lactuca sativa HOM05D006219 ORTHO05D007562 5.9e-85 318.9 417 46.5
Oeu029038.1 Olea europaea HOM05D006219 ORTHO05D007562 1.0e-84 318.2 436 45.0
ECA238G2300 Erigeron canadensis HOM05D006219 ORTHO05D007562 6.5e-84 315.5 396 46.7
Carub.0006s2578 Capsella rubella HOM05D006219 ORTHO05D007562 1.4e-83 314.3 395 47.3
AT5G28500 Arabidopsis thaliana HOM05D006219 ORTHO05D007562 1.9e-83 313.9 414 47.3
Aa31LG11G8710 Aethionema arabicum HOM05D006219 ORTHO05D007562 5.5e-83 312.4 445 44.0
Thhalv10004236m.g Eutrema salsugineum HOM05D006219 ORTHO05D007562 5.5e-83 312.4 450 46.4
Dinv06988 Davidia involucrata HOM05D006219 ORTHO05D007562 1.6e-82 310.8 420 47.4
Ah.06g191950 Amaranthus hybridus HOM05D006219 ORTHO05D007562 4.7e-82 309.3 456 44.5
BraA06t26711Z Brassica rapa HOM05D006219 ORTHO05D007562 7.9e-82 308.5 420 46.4
C07p40330 Brassica napus HOM05D006219 ORTHO05D007562 1.0e-81 308.1 420 46.2
Actinidia06785 Actinidia chinensis HOM05D006219 ORTHO05D007562 1.4e-81 307.8 448 47.5
PGSC0003DMG400028668 Solanum tuberosum HOM05D006219 ORTHO05D007562 1.4e-81 307.8 458 44.8
DCAR_002178 Daucus carota HOM05D006219 ORTHO05D007562 1.8e-81 307.4 383 49.3
BcaNung02093 Brassica carinata HOM05D006219 ORTHO05D007562 2.3e-81 307.0 420 46.0
BolC7t44567H Brassica oleracea HOM05D006219 ORTHO05D007562 2.3e-81 307.0 420 46.0
A06p37950 Brassica napus HOM05D006219 ORTHO05D007562 3.0e-81 306.6 420 46.2
Sopen11g002000 Solanum pennellii HOM05D006219 ORTHO05D007562 3.9e-81 306.2 458 44.8
HanXRQChr07g0201901 Helianthus annuus HOM05D006219 ORTHO05D007562 7.4e-80 302.0 393 46.6
Peaxi162Scf00120g00021 Petunia axillaris HOM05D006219 ORTHO05D007562 7.4e-80 302.0 461 43.4
Sed0012882 Sechium edule HOM05D006219 ORTHO05D007562 7.4e-80 302.0 409 46.2
Migut.F00810 Erythranthe guttata HOM05D006219 ORTHO05D007562 2.2e-79 300.4 393 45.3
Solyc11g006060.2 Solanum lycopersicum HOM05D006219 ORTHO05D007562 2.2e-79 300.4 447 44.7
CAN.G582.15 Capsicum annuum HOM05D006219 ORTHO05D007562 3.7e-79 299.7 443 43.8
Aa31LG5G14970 Aethionema arabicum HOM05D006219 ORTHO05D007562 6.3e-79 298.9 400 45.2
EL10Ac4g09057 Beta vulgaris HOM05D006219 ORTHO05D007562 2.4e-78 297.0 463 43.4
Rhsim05G0175300 Rhododendron simsii HOM05D006219 ORTHO05D007562 7.0e-78 295.4 429 44.8
CARHR078740 Cardamine hirsuta HOM05D006219 ORTHO05D007562 2.6e-77 293.5 400 45.5
FAN14G1966 Fragaria x ananassa HOM05D006219 ORTHO05D007562 2.9e-76 290.0 454 44.5
FAN14G5007 Fragaria x ananassa HOM05D006219 ORTHO05D007562 2.9e-76 290.0 454 44.5
Carub.0003s0370 Capsella rubella HOM05D006219 ORTHO05D007562 3.8e-76 289.7 402 45.3
Nitab4.5_0000856g0150 Nicotiana tabacum HOM05D006219 ORTHO05D007562 1.5e-75 287.7 384 46.4
BcaB04g21366 Brassica carinata HOM05D006219 ORTHO05D007562 1.9e-75 287.3 453 44.4
BcaC09g47795 Brassica carinata HOM05D006219 ORTHO05D007562 4.2e-75 286.2 456 43.2
BraA01t04521Z Brassica rapa HOM05D006219 ORTHO05D007562 5.5e-75 285.8 454 43.6
BolC1t05743H Brassica oleracea HOM05D006219 ORTHO05D007562 3.6e-74 283.1 461 43.4
SalBow3G3408 Salvia bowleyana HOM05D006219 ORTHO05D007562 6.1e-74 282.3 459 43.4
SEGI_10874 Sequoiadendron giganteum HOM05D006219 ORTHO05D007562 6.1e-74 282.3 385 43.9
Thhalv10020727m.g Eutrema salsugineum HOM05D006219 ORTHO05D007562 8.0e-74 282.0 458 42.8
Sp3g03390 Schrenkiella parvula HOM05D006219 ORTHO05D007562 1.0e-73 281.6 407 44.2
A01p40850 Brassica napus HOM05D006219 ORTHO05D007562 3.9e-73 279.6 455 43.1
BNapus_Darmor_BZH_scaffold_78p00860 Brassica napus HOM05D006219 ORTHO05D007562 3.9e-73 279.6 455 43.1
AT3G04550 Arabidopsis thaliana HOM05D006219 ORTHO05D007562 6.7e-73 278.9 403 44.2
TPR.G10266 Trifolium pratense HOM05D006219 ORTHO05D007562 6.7e-73 278.9 442 41.4
unitig_748.g8683 Utricularia gibba HOM05D006219 ORTHO05D007562 1.5e-72 277.7 396 42.9
AUR62004874 Chenopodium quinoa HOM05D006219 ORTHO05D007562 9.7e-72 275.0 346 47.1
Nitab4.5_0010345g0010 Nicotiana tabacum HOM05D006219 ORTHO05D007562 1.3e-71 274.6 384 44.8
AL3G14570 Arabidopsis lyrata HOM05D006219 ORTHO05D007562 1.1e-70 271.6 399 43.9
RcHm_v2.0_Chr3g0450031 Rosa chinensis HOM05D006219 ORTHO05D007562 1.5e-67 261.2 331 48.0
Psat6g143080 Pisum sativum HOM05D006219 ORTHO05D007562 7.2e-67 258.8 344 45.3
Os10g0445600 Oryza sativa ssp. japonica HOM05D006219 ORTHO05D007562 9.4e-67 258.5 418 43.3
vmacro20002 Vaccinium macrocarpon HOM05D006219 ORTHO05D007562 9.4e-67 258.5 344 47.4
Zm00001eb066000 Zea mays HOM05D006219 ORTHO05D007562 3.0e-65 253.4 410 42.7
SGA_v2.0_scaffold210G42065 Striga asiatica HOM05D006219 ORTHO05D007562 9.1e-62 241.9 354 45.8
Nn1g02711 Nelumbo nucifera HOM05D006219 ORTHO05D007562 1.7e-60 237.7 331 50.5
MBI18_g37358_MAGBIO Magnolia biondii HOM05D006219 ORTHO05D007562 4.0e-57 226.5 340 46.8
Mapoly0001s0431 Marchantia polymorpha HOM05D006219 ORTHO05D007562 5.9e-53 212.6 385 38.2
Pp3c18_4320 Physcomitrium patens HOM05D006219 ORTHO05D007562 1.5e-51 208.0 393 37.9
AagrBONN_evm.TU.Sc2ySwM_117.503 Anthoceros agrestis HOM05D006219 ORTHO05D007562 4.7e-50 203.0 397 37.0
Hma1.2p1_1227F.1_g268570 Hydrangea macrophylla HOM05D006219 ORTHO05D007562 1.8e-49 201.1 335 43.3
Glyma.20G222200 Glycine max HOM05D006219 ORTHO05D007562 2.0e-48 197.6 230 49.6
MBI18_g32212_MAGBIO Magnolia biondii HOM05D006219 ORTHO05D007562 1.1e-46 191.8 463 38.2
CBR_g29314 Chara braunii HOM05D006219 ORTHO05D007562 2.4e-46 190.7 419 36.3
Ciclev10027647m.g Citrus clementina HOM05D006219 ORTHO05D007562 3.9e-44 183.3 167 55.7
MD04G1228600 Malus domestica HOM05D006219 ORTHO05D007562 3.3e-43 180.3 229 47.6
Lalb_Chr18g0044051 Lupinus albus HOM05D006219 ORTHO05D007562 3.5e-37 160.2 235 45.5
Eucgr.H04253 Eucalyptus grandis HOM05D006219 ORTHO05D007562 1.5e-32 144.8 307 41.4
Cre06.g308450 Chlamydomonas reinhardtii HOM05D006219 ORTHO05D007562 2.8e-26 124.0 411 28.2
AagrBONN_evm.TU.Sc2ySwM_228.3126 Anthoceros agrestis HOM05D006219 ORTHO05D007562 1.6e-21 108.2 245 34.3
MCO04G553 Micromonas commoda HOM05D006219 ORTHO05D007562 2.5e-19 100.9 413 27.6
Pp3c16_6440 Physcomitrium patens HOM05D006219 ORTHO05D007562 5.6e-19 99.8 224 33.5
PRCOL_00003529 Prasinoderma coloniale HOM05D006219 ORTHO05D007562 9.6e-19 99.0 389 28.8
Cpa.g.sc162.21 Carica papaya HOM05D000369 ORTHO05D007562 2.8e-18 97.4 168 39.3
SMO137G0122 Selaginella moellendorffii HOM05D006219 ORTHO05D007562 2.4e-17 94.4 164 38.4
Mapoly4350s0001 Marchantia polymorpha HOM05D006219 ORTHO05D007562 1.5e-08 65.1 185 30.8


User provided reference genes

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