Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0680G090 Amborella trichopoda HOM05D007893 ORTHO05D010042 9.7e-109 398.7 201 100.0
CiPaw.12G066600 Carya illinoinensis HOM05D007893 ORTHO05D010042 4.7e-31 140.6 194 40.2
Cfa012483 Carpinus fangiana HOM05D007893 ORTHO05D010042 1.4e-30 139.0 193 40.9
Lalb_Chr08g0231971 Lupinus albus HOM05D007893 ORTHO05D010042 2.6e-29 134.8 198 38.4
Haze_08182 Corylus avellana HOM05D007893 ORTHO05D010042 5.8e-29 133.7 196 40.3
arahy.Tifrunner.gnm1.ann1.40GBPJ Arachis hypogaea HOM05D007893 ORTHO05D010042 7.6e-29 133.3 196 37.8
QL05p025350 Quercus lobata HOM05D007893 ORTHO05D010042 1.3e-28 132.5 196 39.3
TAR374G1349 Trochodendron aralioides HOM05D007893 ORTHO05D010042 2.9e-28 131.3 200 39.0
VMungo1215G2510 Vigna mungo HOM05D007893 ORTHO05D010042 3.8e-28 131.0 192 36.5
arahy.Tifrunner.gnm1.ann1.7C2XF6 Arachis hypogaea HOM05D007893 ORTHO05D010042 2.4e-27 128.3 196 36.7
Thecc.03G306900 Theobroma cacao HOM05D007893 ORTHO05D010042 3.2e-27 127.9 204 37.3
COL.COLO4_16973 Corchorus olitorius HOM05D000070 ORTHO05D007358 5.4e-27 127.1 192 39.6
Glyma.01G016100 Glycine max HOM05D007893 ORTHO05D010042 5.4e-27 127.1 199 38.2
TWI60G0064 Tripterygium wilfordii HOM05D007893 ORTHO05D010042 5.4e-27 127.1 196 38.8
Phvul.002G138600 Phaseolus vulgaris HOM05D007893 ORTHO05D010042 1.2e-26 125.9 190 36.8
Sc22g0001680 Simmondsia chinensis HOM05D007893 ORTHO05D010042 1.2e-26 125.9 181 38.1
arahy.Tifrunner.gnm1.ann1.AUE0A3 Arachis hypogaea HOM05D007893 ORTHO05D010042 3.5e-26 124.4 178 37.1
Atru.chr2.2027 Acer truncatum HOM05D007893 ORTHO05D010042 6.0e-26 123.6 199 33.2
Atru.chr2.2039 Acer truncatum HOM05D007893 ORTHO05D010042 6.0e-26 123.6 199 33.2
TWI81G0227 Tripterygium wilfordii HOM05D007893 ORTHO05D010042 3.0e-25 121.3 188 37.8
ClCG10G008950 Citrullus lanatus HOM05D007893 ORTHO05D010042 3.9e-25 120.9 190 36.3
RcHm_v2.0_Chr3g0484571 Rosa chinensis HOM05D007893 ORTHO05D010042 3.9e-25 120.9 195 39.0
MD14G1081200 Malus domestica HOM05D007893 ORTHO05D010042 5.1e-25 120.6 195 36.9
Sed0014013 Sechium edule HOM05D007893 ORTHO05D010042 7.3e-24 116.7 145 37.9
Psat2g137760 Pisum sativum HOM05D007893 ORTHO05D010042 1.3e-23 115.9 139 41.7
Gorai.004G065800 Gossypium raimondii HOM05D007893 ORTHO05D010042 2.1e-23 115.2 182 36.3
Ca_08153_v3 Cicer arietinum L. HOM05D007893 ORTHO05D010042 3.6e-23 114.4 141 38.3
GSVIVG01013113001 Vitis vinifera HOM05D007893 ORTHO05D010042 6.2e-23 113.6 211 33.2
Nn6g33361 Nelumbo nucifera HOM05D007893 ORTHO05D010042 2.4e-22 111.7 189 35.4
Lj3g0001800 Lotus japonicus HOM05D007893 ORTHO05D010042 3.1e-22 111.3 198 37.9
Lj3g0011187 Lotus japonicus HOM05D007893 ORTHO05D010042 3.1e-22 111.3 198 37.9
vmacro00309 Vaccinium macrocarpon HOM05D007893 ORTHO05D010042 4.0e-22 110.9 134 39.6
PGR042G3148 Punica granatum HOM05D007893 ORTHO05D010042 9.0e-22 109.8 187 34.2
TPR.G6545 Trifolium pratense HOM05D007893 ORTHO05D010042 9.0e-22 109.8 139 40.3
Cpa.g.sc159.24 Carica papaya HOM05D007893 ORTHO05D010042 1.5e-21 109.0 151 37.1
Potri.001G139300 Populus trichocarpa HOM05D007893 ORTHO05D010042 1.5e-21 109.0 141 42.6
TPR.G8086 Trifolium pratense HOM05D007893 ORTHO05D010042 2.0e-21 108.6 193 35.2
DCAR_012172 Daucus carota HOM05D007893 ORTHO05D010042 4.5e-21 107.5 142 39.4
Sabra01G0108300 Salix brachista HOM05D007893 ORTHO05D010042 4.5e-21 107.5 207 34.8
MSTRG.23210 Avicennia marina HOM05D007893 ORTHO05D010042 9.9e-21 106.3 142 38.0
Nn7g37761 Nelumbo nucifera HOM05D007893 ORTHO05D010042 1.7e-20 105.5 197 33.0
SGA_v2.0_scaffold25G10745 Striga asiatica HOM05D007893 ORTHO05D010042 7.1e-19 100.1 144 34.7
Nitab4.5_0000256g0090 Nicotiana tabacum HOM05D007893 ORTHO05D010042 1.2e-18 99.4 188 34.0
TWI75G0531 Tripterygium wilfordii HOM05D007893 ORTHO05D010042 1.6e-18 99.0 137 35.8
TWI75G0860 Tripterygium wilfordii HOM05D007893 ORTHO05D010042 1.6e-18 99.0 137 35.8
TWI75G1402 Tripterygium wilfordii HOM05D007893 ORTHO05D010042 1.6e-18 99.0 137 35.8
Lj7A473T51 Lonicera japonica HOM05D007893 ORTHO05D010042 3.5e-18 97.8 140 38.6
TWI75G0965 Tripterygium wilfordii HOM05D007893 ORTHO05D010042 3.5e-18 97.8 137 35.8
TWI75G1888 Tripterygium wilfordii HOM05D007893 ORTHO05D010042 3.5e-18 97.8 137 35.8
Oeu023344.1 Olea europaea HOM05D007893 ORTHO05D010042 4.6e-18 97.4 144 33.3
Oeu023345.1 Olea europaea HOM05D007893 ORTHO05D010042 4.6e-18 97.4 144 33.3
Cc08_g03180 Coffea canephora HOM05D007893 ORTHO05D010042 7.9e-18 96.7 195 30.8
Nitab4.5_0002310g0060 Nicotiana tabacum HOM05D007893 ORTHO05D010042 3.9e-17 94.4 189 32.8
HPP92_022591 Vanilla planifolia HOM05D007893 ORTHO05D010042 1.1e-16 92.8 147 38.1
Migut.O00264 Erythranthe guttata HOM05D007893 ORTHO05D010042 1.5e-16 92.4 144 33.3
Eucgr.E00255 Eucalyptus grandis HOM05D007893 ORTHO05D010042 1.9e-16 92.0 144 36.8
Medtr5g029690 Medicago truncatula HOM05D007893 ORTHO05D010042 3.3e-16 91.3 139 36.7
PGSC0003DMG400002555 Solanum tuberosum HOM05D007893 ORTHO05D010042 5.6e-16 90.5 184 28.8
Duzib068G1049 Durio zibethinus HOM05D007893 ORTHO05D010042 2.0e-13 82.0 95 43.2
MBI06_g07794_MAGBIO Magnolia biondii HOM05D004824 ORTHO05D003903 2.2e-12 78.6 139 30.9
Zm00001eb109140 Zea mays HOM05D007893 ORTHO05D010042 2.2e-12 78.6 158 28.5
Manes.04G148100 Manihot esculenta HOM05D007893 ORTHO05D010042 2.9e-12 78.2 188 33.0
Dinv25240 Davidia involucrata HOM05D007893 ORTHO05D010042 1.4e-11 75.9 84 46.4
MBI18_g42841_MAGBIO Magnolia biondii HOM05D007893 ORTHO05D010042 2.4e-11 75.1 118 37.3
Aqoxy4G00051 Aquilegia oxysepala HOM05D007893 ORTHO05D010042 3.2e-11 74.7 96 41.7
Gohir.A05G388900 Gossypium hirsutum HOM05D004824 ORTHO05D003903 2.1e-10 72.0 182 26.9
Gohir.D08G063700 Gossypium hirsutum HOM05D007893 ORTHO05D010042 2.1e-10 72.0 95 40.0
Gohir.D04G027600 Gossypium hirsutum HOM05D004824 ORTHO05D003903 2.7e-10 71.6 143 30.1
Gohir.D04G027800 Gossypium hirsutum HOM05D004824 ORTHO05D003903 2.7e-10 71.6 143 30.1
Gorai.012G030300 Gossypium raimondii HOM05D004824 ORTHO05D003903 2.7e-10 71.6 143 30.1
Gorai.N017300 Gossypium raimondii HOM05D004824 ORTHO05D003903 2.7e-10 71.6 143 30.1
Sed0004559 Sechium edule HOM05D004824 ORTHO05D003903 2.3e-09 68.6 142 31.7
CANSAT11G2445 Cannabis sativa HOM05D004824 ORTHO05D003903 3.0e-09 68.2 140 25.7
Nitab4.5_0005203g0030 Nicotiana tabacum HOM05D007893 ORTHO05D010042 3.9e-09 67.8 94 38.3
ClCG06G012000 Citrullus lanatus HOM05D004824 ORTHO05D003903 1.1e-08 66.2 142 31.0
SalBow6G7259 Salvia bowleyana HOM05D007893 ORTHO05D010042 1.1e-08 66.2 93 35.5
TWI79G0695 Tripterygium wilfordii HOM05D004824 ORTHO05D003903 1.1e-08 66.2 174 29.3
Manes.10G060400 Manihot esculenta HOM05D004824 ORTHO05D003903 1.5e-08 65.9 135 31.1
Rhsim04G0218400 Rhododendron simsii HOM05D004020 ORTHO05D004735 1.5e-08 65.9 139 28.8
GSVIVG01015849001 Vitis vinifera HOM05D004824 ORTHO05D003903 1.5e-08 65.9 139 31.7
vmacro04677 Vaccinium macrocarpon HOM05D004824 ORTHO05D003903 2.5e-08 65.1 179 26.8
HPP92_026390 Vanilla planifolia HOM05D004824 ORTHO05D003903 3.3e-08 64.7 193 23.3
SEGI_31001 Sequoiadendron giganteum HOM05D007358 ORTHO05D009117 4.3e-08 64.3 146 30.8
ATR0807G095 Amborella trichopoda HOM05D004824 ORTHO05D003903 7.4e-08 63.5 136 28.7
Hma1.2p1_0098F.1_g048160 Hydrangea macrophylla HOM05D004824 ORTHO05D003903 7.4e-08 63.5 139 25.2
Dinv16084 Davidia involucrata HOM05D004824 ORTHO05D003903 9.6e-08 63.2 136 27.2
MD10G1219600 Malus domestica HOM05D004824 ORTHO05D003903 9.6e-08 63.2 138 28.3
Aqoxy1G00124 Aquilegia oxysepala HOM05D004824 ORTHO05D003903 1.3e-07 62.8 149 28.9
TWI63G0852 Tripterygium wilfordii HOM05D004824 ORTHO05D003903 1.3e-07 62.8 141 32.6
vmacro17185 Vaccinium macrocarpon HOM05D007496 ORTHO05D009479 1.3e-07 62.8 198 27.8
PGR031G3090 Punica granatum HOM05D007639 ORTHO05D009509 1.6e-07 62.4 141 33.3
Rhsim09G0071100 Rhododendron simsii HOM05D007496 ORTHO05D009479 1.6e-07 62.4 198 27.3
TAR623G1477 Trochodendron aralioides HOM05D004824 ORTHO05D003903 1.6e-07 62.4 174 25.9
CiPaw.15G110500 Carya illinoinensis HOM05D004824 ORTHO05D003903 2.1e-07 62.0 141 27.7
Ciclev10003562m.g Citrus clementina HOM05D007639 ORTHO05D009509 2.1e-07 62.0 138 30.4
CiPaw.15G071600 Carya illinoinensis HOM05D007639 ORTHO05D009509 2.8e-07 61.6 107 35.5
MELO3C010266.2 Cucumis melo HOM05D004824 ORTHO05D003903 2.8e-07 61.6 142 28.2
Sc16g0009020 Simmondsia chinensis HOM05D006888 ORTHO05D008371 2.8e-07 61.6 118 30.5
SEGI_39034 Sequoiadendron giganteum HOM05D007675 ORTHO05D009699 3.7e-07 61.2 138 28.3
Thecc.01G121800 Theobroma cacao HOM05D004824 ORTHO05D003903 3.7e-07 61.2 143 27.3
Actinidia38410 Actinidia chinensis HOM05D007496 ORTHO05D009479 6.2e-07 60.5 170 28.8
EL10Ac4g09447 Beta vulgaris HOM05D006888 ORTHO05D008371 6.2e-07 60.5 119 31.9
Duzib147G0012 Durio zibethinus HOM05D004824 ORTHO05D003903 6.2e-07 60.5 199 22.6
CsaV3_1G028470 Cucumis sativus L. HOM05D004824 ORTHO05D003903 8.2e-07 60.1 142 28.2
ATR0733G078 Amborella trichopoda HOM05D007639 ORTHO05D009509 1.1e-06 59.7 103 32.0
Nn1g01012 Nelumbo nucifera HOM05D007496 ORTHO05D009479 1.1e-06 59.7 169 29.0
Potri.014G040200 Populus trichocarpa HOM05D007639 ORTHO05D009509 1.1e-06 59.7 107 34.6
QL09p028535 Quercus lobata HOM05D007639 ORTHO05D009509 1.1e-06 59.7 138 29.7
Ciclev10011094m.g Citrus clementina HOM05D004824 ORTHO05D003903 1.4e-06 59.3 139 26.6
Actinidia04364 Actinidia chinensis HOM05D004824 ORTHO05D003903 1.8e-06 58.9 136 26.5
Duzib133G1060 Durio zibethinus HOM05D006931 ORTHO05D008782 2.4e-06 58.5 114 32.5
TWI74G0969 Tripterygium wilfordii HOM05D007103 ORTHO05D008948 2.4e-06 58.5 138 32.6
ClCG01G007050 Citrullus lanatus HOM05D007496 ORTHO05D009479 3.1e-06 58.2 119 28.6
VMungo1383G0602 Vigna mungo HOM05D004824 ORTHO05D003903 3.1e-06 58.2 148 23.6
Hma1.2p1_2831F.1_g329220 Hydrangea macrophylla HOM05D007893 ORTHO05D010042 4.0e-06 57.8 67 43.3
SHI25578 Sapria himalayana HOM05D007639 ORTHO05D009509 4.0e-06 57.8 114 33.3
ATR0661G317 Amborella trichopoda HOM05D007545 ORTHO05D009579 5.3e-06 57.4 108 33.3
QL05p080937 Quercus lobata HOM05D004824 ORTHO05D003903 5.3e-06 57.4 139 25.9
BcaC07g38995 Brassica carinata HOM05D007639 ORTHO05D009509 6.9e-06 57.0 105 33.3
BolC8t49556H Brassica oleracea HOM05D007639 ORTHO05D009509 6.9e-06 57.0 105 33.3
Migut.D01549 Erythranthe guttata HOM05D004824 ORTHO05D003903 6.9e-06 57.0 201 24.9
Manes.02G087700 Manihot esculenta HOM05D004824 ORTHO05D003903 6.9e-06 57.0 143 24.5
Phvul.008G038900 Phaseolus vulgaris HOM05D004824 ORTHO05D003903 9.0e-06 56.6 152 24.3
SGA_v2.0_scaffold141G35594 Striga asiatica HOM05D017480 ORTHO05D026194 9.0e-06 56.6 53 43.4


User provided reference genes

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