Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0680G083 Amborella trichopoda HOM05D006991 ORTHO05D009188 0.0e+00 1340.1 652 100.0
Potri.002G157400 Populus trichocarpa HOM05D006991 ORTHO05D009188 7.9e-259 897.1 644 66.6
Nn6g33525 Nelumbo nucifera HOM05D006991 ORTHO05D009188 2.5e-257 892.1 653 66.5
GSVIVG01026850001 Vitis vinifera HOM05D006991 ORTHO05D009188 1.0e-253 880.2 652 65.6
QL08p049512 Quercus lobata HOM05D006991 ORTHO05D009188 2.9e-253 878.6 653 66.0
Glyma.07G073500 Glycine max HOM05D006991 ORTHO05D009188 7.1e-252 874.0 653 64.6
Lj3g0006815 Lotus japonicus HOM05D006991 ORTHO05D009188 1.6e-251 872.8 653 64.9
Lalb_Chr04g0256761 Lupinus albus HOM05D006991 ORTHO05D009188 6.1e-251 870.9 653 65.1
TPR.G4402 Trifolium pratense HOM05D006991 ORTHO05D009188 2.3e-250 869.0 645 64.5
RcHm_v2.0_Chr1g0354041 Rosa chinensis HOM05D006991 ORTHO05D009188 6.7e-250 867.5 656 63.9
CANSAT56G3382 Cannabis sativa HOM05D006991 ORTHO05D009188 8.7e-250 867.1 657 63.9
Prupe.2G164100 Prunus persica HOM05D006991 ORTHO05D009188 1.1e-249 866.7 645 65.4
FvH4_7g13830 Fragaria vesca HOM05D006991 ORTHO05D009188 7.4e-249 864.0 652 64.6
FAN03G2057 Fragaria x ananassa HOM05D006991 ORTHO05D009188 7.4e-249 864.0 656 63.9
MD01G1054400 Malus domestica HOM05D006991 ORTHO05D009188 1.3e-248 863.2 637 65.1
Medtr8g031480 Medicago truncatula HOM05D006991 ORTHO05D009188 1.3e-248 863.2 656 63.3
Haze_15467 Corylus avellana HOM05D006991 ORTHO05D009188 1.6e-248 862.8 655 65.3
Ciclev10019238m.g Citrus clementina HOM05D006991 ORTHO05D009188 1.0e-245 853.6 651 63.9
Aqoxy5G03423_Aqoxy5G03424 Aquilegia oxysepala HOM05D006991 ORTHO05D009188 3.2e-244 848.6 648 64.5
VMungo0331G1855 Vigna mungo HOM05D006991 ORTHO05D009188 3.2e-244 848.6 637 65.1
TWI23G0867 Tripterygium wilfordii HOM05D006991 ORTHO05D009188 1.6e-243 846.3 646 64.6
FAN10G0464 Fragaria x ananassa HOM05D006991 ORTHO05D009188 6.1e-243 844.3 683 61.5
FAN06G2381 Fragaria x ananassa HOM05D006991 ORTHO05D009188 7.9e-243 844.0 690 60.7
AUR62004323 Chenopodium quinoa HOM05D006991 ORTHO05D009188 2.3e-242 842.4 650 62.9
PSO063G6634 Papaver somniferum HOM05D006991 ORTHO05D009188 5.1e-242 841.3 644 64.1
Cfa003952 Carpinus fangiana HOM05D006991 ORTHO05D009188 1.1e-241 840.1 656 64.3
PGR042G0621 Punica granatum HOM05D006991 ORTHO05D009188 2.5e-241 839.0 647 62.4
Sed0028010 Sechium edule HOM05D006991 ORTHO05D009188 7.4e-241 837.4 656 63.1
ClCG05G001680 Citrullus lanatus HOM05D006991 ORTHO05D009188 2.2e-240 835.9 655 63.4
COL.COLO4_12678 Corchorus olitorius HOM05D006991 ORTHO05D009188 3.7e-240 835.1 648 63.6
Thecc.01G363100 Theobroma cacao HOM05D006991 ORTHO05D009188 8.2e-240 833.9 647 63.8
CDE05G1529 Ceratophyllum demersum HOM05D006991 ORTHO05D009188 1.1e-239 833.6 640 62.3
Dinv43786 Davidia involucrata HOM05D006991 ORTHO05D009188 2.4e-239 832.4 651 63.7
Os07g0457300 Oryza sativa ssp. japonica HOM05D006991 ORTHO05D009188 3.1e-239 832.0 655 62.9
HanXRQChr04g0121651 Helianthus annuus HOM05D006991 ORTHO05D009188 1.2e-238 830.1 641 62.6
Atru.chr5.484 Acer truncatum HOM05D006991 ORTHO05D009188 1.5e-238 829.7 611 65.6
FAN01G0340 Fragaria x ananassa HOM05D006991 ORTHO05D009188 3.4e-238 828.6 672 61.3
FAN06G3007 Fragaria x ananassa HOM05D006991 ORTHO05D009188 4.5e-238 828.2 672 61.3
MELO3C006127.2 Cucumis melo HOM05D006991 ORTHO05D009188 5.9e-238 827.8 654 62.8
Duzib138G0243 Durio zibethinus HOM05D006991 ORTHO05D009188 7.7e-238 827.4 655 62.7
Ah.05g176510 Amaranthus hybridus HOM05D006991 ORTHO05D009188 1.0e-237 827.0 650 61.7
DCAR_015941 Daucus carota HOM05D006991 ORTHO05D009188 3.8e-237 825.1 646 61.6
Zm00001eb306550 Zea mays HOM05D006991 ORTHO05D009188 1.1e-236 823.5 650 62.6
Eucgr.E00177 Eucalyptus grandis HOM05D006991 ORTHO05D009188 2.5e-236 822.4 678 60.6
PGSC0003DMG400000156 Solanum tuberosum HOM05D006991 ORTHO05D009188 7.2e-236 820.8 645 62.2
BolC8t52898H Brassica oleracea HOM05D006991 ORTHO05D009188 1.6e-235 819.7 641 63.5
Nitab4.5_0002160g0070 Nicotiana tabacum HOM05D006991 ORTHO05D009188 3.6e-235 818.5 644 63.4
Lsat_1_v5_gn_7_5201 Lactuca sativa HOM05D006991 ORTHO05D009188 4.7e-235 818.1 647 61.1
Nitab4.5_0009210g0040 Nicotiana tabacum HOM05D006991 ORTHO05D009188 4.7e-235 818.1 644 63.4
MSTRG.28216 Avicennia marina HOM05D006991 ORTHO05D009188 6.1e-235 817.8 645 63.1
CSS0011179 Camellia sinensis var. sinensis HOM05D006991 ORTHO05D009188 1.4e-234 816.6 644 63.0
Sp1g00530 Schrenkiella parvula HOM05D006991 ORTHO05D009188 1.4e-234 816.6 641 62.9
Lj9A581T68 Lonicera japonica HOM05D006991 ORTHO05D009188 5.1e-234 814.7 643 62.1
CAN.G78.50 Capsicum annuum HOM05D006991 ORTHO05D009188 6.7e-234 814.3 645 62.3
THA.LOC104801448 Tarenaya hassleriana HOM05D006991 ORTHO05D009188 1.1e-233 813.5 657 60.7
Sopen01g038120 Solanum pennellii HOM05D006991 ORTHO05D009188 1.5e-233 813.1 645 61.9
Thhalv10007047m.g Eutrema salsugineum HOM05D006991 ORTHO05D009188 2.6e-233 812.4 641 62.9
CsaV3_3G009060 Cucumis sativus L. HOM05D006991 ORTHO05D009188 1.7e-232 809.7 644 63.0
Gorai.001G170100 Gossypium raimondii HOM05D006991 ORTHO05D009188 1.7e-232 809.7 640 63.1
C08p53830 Brassica napus HOM05D006991 ORTHO05D009188 1.4e-231 806.6 635 63.1
Gohir.D07G148700 Gossypium hirsutum HOM05D006991 ORTHO05D009188 3.1e-231 805.4 640 62.8
Peaxi162Scf00020g00011 Petunia axillaris HOM05D006991 ORTHO05D009188 5.3e-231 804.7 665 60.9
AT1G01770 Arabidopsis thaliana HOM05D006991 ORTHO05D009188 2.0e-230 802.7 650 61.7
BraA09t42261Z Brassica rapa HOM05D006991 ORTHO05D009188 1.0e-229 800.4 635 63.0
Hund27298 Selenicereus undatus HOM05D006991 ORTHO05D002850 3.8e-229 798.5 660 59.5
Solyc01g094330.3 Solanum lycopersicum HOM05D006991 ORTHO05D009188 3.8e-229 798.5 669 59.8
AL1G10570 Arabidopsis lyrata HOM05D006991 ORTHO05D009188 5.0e-229 798.1 641 61.6
Cc02_g37710 Coffea canephora HOM05D006991 ORTHO05D009188 6.5e-229 797.7 640 61.6
Carub.0001s0044 Capsella rubella HOM05D006991 ORTHO05D009188 1.1e-228 797.0 654 61.6
Aa31LG1G11140 Aethionema arabicum HOM05D006991 ORTHO05D009188 1.5e-228 796.6 648 60.3
Sc26g0001000 Simmondsia chinensis HOM05D006991 ORTHO05D009188 2.7e-227 792.3 640 61.6
SalBow5G3488 Salvia bowleyana HOM05D006991 ORTHO05D009188 1.8e-226 789.6 659 59.6
SalBow5G3803 Salvia bowleyana HOM05D006991 ORTHO05D009188 1.8e-226 789.6 659 59.6
Cpa.g.sc18.226 Carica papaya HOM05D006991 ORTHO05D009188 4.0e-226 788.5 666 59.6
Rhsim07G0017800 Rhododendron simsii HOM05D006991 ORTHO05D009188 2.6e-225 785.8 645 62.3
SGA_v2.0_scaffold43G16441 Striga asiatica HOM05D006991 ORTHO05D009188 3.3e-225 785.4 647 60.4
Migut.N01431 Erythranthe guttata HOM05D006991 ORTHO05D009188 4.4e-225 785.0 647 59.2
ECA236G3544 Erigeron canadensis HOM05D006991 ORTHO05D009188 2.8e-224 782.3 640 59.2
Hma1.2p1_0001F.1_g001590 Hydrangea macrophylla HOM05D006991 ORTHO05D009188 1.1e-223 780.4 644 60.7
CSS0000914 Camellia sinensis var. sinensis HOM05D006991 ORTHO05D009188 7.0e-223 777.7 639 60.9
Gohir.A07G142900 Gossypium hirsutum HOM05D006991 ORTHO05D009188 7.0e-223 777.7 642 61.2
Psat4g154080 Pisum sativum HOM05D006991 ORTHO05D009188 1.4e-218 763.5 585 63.1
vmacro13305 Vaccinium macrocarpon HOM05D006991 ORTHO05D009188 7.0e-215 751.1 684 56.3
HPP92_004979 Vanilla planifolia HOM05D006991 ORTHO05D009188 9.4e-212 740.7 643 56.5
EL10Ac1g00536 Beta vulgaris HOM05D006991 ORTHO05D009188 1.2e-203 713.8 649 55.8
arahy.Tifrunner.gnm1.ann1.NT7Z8Q Arachis hypogaea HOM05D006991 ORTHO05D009188 2.9e-197 692.6 650 54.5
unitig_748.g7107 Utricularia gibba HOM05D006991 ORTHO05D009188 6.2e-195 684.9 600 57.8
CiPaw.02G028700 Carya illinoinensis HOM05D006991 ORTHO05D009188 1.2e-187 660.6 451 69.8
Hma1.2p1_0001F.1_g001600 Hydrangea macrophylla HOM05D006991 ORTHO05D009188 1.4e-186 657.1 498 64.3
Actinidia10005 Actinidia chinensis HOM05D006991 ORTHO05D009188 1.6e-182 643.7 552 58.9
Pp3c9_2540 Physcomitrium patens HOM05D006991 ORTHO05D009188 3.9e-181 639.0 637 52.3
SMO164G0214 Selaginella moellendorffii HOM05D006991 ORTHO05D009188 2.8e-179 632.9 632 53.2
arahy.Tifrunner.gnm1.ann1.JH251T Arachis hypogaea HOM05D006991 ORTHO05D009188 6.8e-170 601.7 650 49.7
MBI18_g09765_MAGBIO Magnolia biondii HOM05D006991 ORTHO05D009188 4.8e-163 578.9 514 56.0
Ca_23659_v3 Cicer arietinum L. HOM05D006991 ORTHO05D009188 4.4e-161 572.4 621 49.4
Phvul.010G096000 Phaseolus vulgaris HOM05D006991 ORTHO05D009188 2.0e-153 547.0 362 70.2
CARHR000550 Cardamine hirsuta HOM05D006991 ORTHO05D009188 9.6e-148 528.1 432 60.4
TAR375G0043 Trochodendron aralioides HOM05D006991 ORTHO05D009188 3.4e-145 519.6 335 74.3
Manes.01G259800 Manihot esculenta HOM05D006991 ORTHO05D009188 2.3e-141 506.9 327 73.1
AagrBONN_evm.TU.Sc2ySwM_344.4948 Anthoceros agrestis HOM05D006991 ORTHO05D009188 1.4e-130 471.1 473 50.7
RcHm_v2.0_Chr1g0354021 Rosa chinensis HOM05D006991 ORTHO05D009188 2.9e-104 383.6 427 49.2
EL10Ac1g02136 Beta vulgaris HOM05D006991 ORTHO05D009188 1.1e-74 285.4 268 53.7
Sabra02G0125100 Salix brachista HOM05D006991 ORTHO05D009188 1.9e-74 284.6 187 72.2
EL10Ac3g06779 Beta vulgaris HOM05D006991 ORTHO05D009188 1.6e-65 255.0 175 64.0
HanXRQChr01g0021681 Helianthus annuus HOM05D006991 ORTHO05D009188 6.8e-61 239.6 207 58.0
QL09p021383 Quercus lobata HOM05D006991 ORTHO05D009188 7.6e-52 209.5 158 65.8
Ca_23662_v3 Cicer arietinum L. HOM05D006991 ORTHO05D028457 3.2e-50 204.1 131 70.2
AUR62003727 Chenopodium quinoa HOM05D001417 ORTHO05D001496 4.0e-45 187.2 148 62.8
EL10Ac5g11247 Beta vulgaris HOM05D006991 ORTHO05D009188 9.0e-45 186.0 191 48.7
AUR62033321 Chenopodium quinoa HOM05D006991 ORTHO05D028457 2.2e-43 181.4 129 62.8
PSO782G3099 Papaver somniferum HOM05D006991 ORTHO05D028457 1.5e-36 158.7 178 48.3
HanXRQChr01g0025441 Helianthus annuus HOM05D006991 ORTHO05D009188 1.9e-31 141.7 73 86.3
HanXRQChr03g0092981 Helianthus annuus HOM05D006991 ORTHO05D226355 1.7e-27 128.6 117 54.7
CAN.G1527.6 Capsicum annuum HOM05D006991 ORTHO05D028457 2.2e-27 128.3 102 58.8
CAN.G226.8 Capsicum annuum HOM05D006991 ORTHO05D000001 7.4e-23 113.2 63 79.4
AUR62036784 Chenopodium quinoa HOM05D006991 ORTHO05D138340 2.7e-17 94.7 81 58.0


User provided reference genes

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