Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0680G075 Amborella trichopoda HOM05D006457 ORTHO05D008275 1.5e-133 479.6 252 100.0
Nn3g19624 Nelumbo nucifera HOM05D006457 ORTHO05D008275 1.6e-114 416.4 252 85.3
MBI18_g15334_MAGBIO Magnolia biondii HOM05D006457 ORTHO05D008275 2.1e-114 416.0 252 84.9
Nn1g02723 Nelumbo nucifera HOM05D006457 ORTHO05D008275 3.9e-113 411.8 252 84.1
Hma1.2p1_0267F.1_g107360 Hydrangea macrophylla HOM05D006457 ORTHO05D008275 5.1e-113 411.4 252 83.3
Ah.04g156060 Amaranthus hybridus HOM05D006457 ORTHO05D008275 2.5e-112 409.1 254 83.5
Cc03_g05380 Coffea canephora HOM05D006457 ORTHO05D008275 3.3e-112 408.7 252 83.7
vmacro15431 Vaccinium macrocarpon HOM05D006457 ORTHO05D008275 4.3e-112 408.3 252 82.9
Hund03034 Selenicereus undatus HOM05D006457 ORTHO05D008275 5.6e-112 407.9 252 82.1
Rhsim02G0036100 Rhododendron simsii HOM05D006457 ORTHO05D008275 2.8e-111 405.6 252 82.5
QL06p016992 Quercus lobata HOM05D006457 ORTHO05D008275 3.6e-111 405.2 251 82.9
AUR62002111 Chenopodium quinoa HOM05D006457 ORTHO05D008275 6.2e-111 404.4 253 82.6
GSVIVG01027767001 Vitis vinifera HOM05D006457 ORTHO05D008275 6.2e-111 404.4 252 82.1
TAR636G2559 Trochodendron aralioides HOM05D006457 ORTHO05D008275 1.4e-110 403.3 252 82.9
DCAR_027307 Daucus carota HOM05D006457 ORTHO05D008275 1.8e-110 402.9 252 81.3
EL10Ac3g05029 Beta vulgaris HOM05D006457 ORTHO05D008275 3.1e-110 402.1 254 81.5
CSS0034990 Camellia sinensis var. sinensis HOM05D006457 ORTHO05D008275 3.1e-110 402.1 252 81.7
SEGI_23974 Sequoiadendron giganteum HOM05D006457 ORTHO05D008275 3.1e-110 402.1 252 82.9
Cfa008326 Carpinus fangiana HOM05D006457 ORTHO05D008275 4.0e-110 401.7 252 82.1
ClCG05G004380 Citrullus lanatus HOM05D006457 ORTHO05D008275 4.0e-110 401.7 250 80.4
MSTRG.9902 Avicennia marina HOM05D006457 ORTHO05D008275 5.3e-110 401.4 252 81.3
MD13G1212500 Malus domestica HOM05D006457 ORTHO05D008275 5.3e-110 401.4 252 82.5
RcHm_v2.0_Chr4g0392411 Rosa chinensis HOM05D006457 ORTHO05D008275 5.3e-110 401.4 252 82.9
PGR031G3937 Punica granatum HOM05D006457 ORTHO05D008275 6.9e-110 401.0 252 80.6
Haze_11345 Corylus avellana HOM05D006457 ORTHO05D008275 9.0e-110 400.6 252 81.7
Potri.008G165800 Populus trichocarpa HOM05D006457 ORTHO05D008275 1.2e-109 400.2 252 81.3
MELO3C006434.2 Cucumis melo HOM05D006457 ORTHO05D008275 1.5e-109 399.8 252 79.8
Sc19g0003600 Simmondsia chinensis HOM05D006457 ORTHO05D008275 2.0e-109 399.4 252 81.0
PSO832G2062 Papaver somniferum HOM05D006457 ORTHO05D008275 2.6e-109 399.1 256 81.6
Manes.03G165500 Manihot esculenta HOM05D006457 ORTHO05D008275 3.4e-109 398.7 252 81.3
PSO210G6447 Papaver somniferum HOM05D006457 ORTHO05D008275 4.4e-109 398.3 256 81.2
Peaxi162Scf00024g02411 Petunia axillaris HOM05D006457 ORTHO05D008275 4.4e-109 398.3 252 80.6
Actinidia39894 Actinidia chinensis HOM05D006457 ORTHO05D008275 5.8e-109 397.9 252 80.6
Medtr1g074170 Medicago truncatula HOM05D006457 ORTHO05D008275 5.8e-109 397.9 252 81.7
Sed0004292 Sechium edule HOM05D006457 ORTHO05D008275 5.8e-109 397.9 252 79.4
Prupe.1G037500 Prunus persica HOM05D006457 ORTHO05D008275 7.6e-109 397.5 252 81.3
CsaV3_3G012200 Cucumis sativus L. HOM05D006457 ORTHO05D008275 9.9e-109 397.1 252 79.4
Migut.N00260 Erythranthe guttata HOM05D006457 ORTHO05D008275 9.9e-109 397.1 252 81.3
Atru.chr4.2091 Acer truncatum HOM05D006457 ORTHO05D008275 1.3e-108 396.7 252 81.0
Aqoxy5G00253 Aquilegia oxysepala HOM05D006457 ORTHO05D008275 1.3e-108 396.7 260 81.2
Gorai.006G072000 Gossypium raimondii HOM05D006457 ORTHO05D008275 1.3e-108 396.7 252 80.6
PGSC0003DMG400017180 Solanum tuberosum HOM05D006457 ORTHO05D008275 1.3e-108 396.7 252 81.3
Thecc.04G253200 Theobroma cacao HOM05D006457 ORTHO05D008275 1.3e-108 396.7 252 81.0
Gohir.A09G058300 Gossypium hirsutum HOM05D006457 ORTHO05D008275 1.7e-108 396.4 252 80.6
Duzib212G0218 Durio zibethinus HOM05D006457 ORTHO05D008275 4.9e-108 394.8 252 80.6
ECA233G3697 Erigeron canadensis HOM05D006457 ORTHO05D008275 4.9e-108 394.8 250 79.6
FvH4_4g03430 Fragaria vesca HOM05D006457 ORTHO05D008275 6.4e-108 394.4 252 81.7
FAN22G0441 Fragaria x ananassa HOM05D006457 ORTHO05D008275 8.4e-108 394.0 252 81.7
Psat6g128760 Pisum sativum HOM05D006457 ORTHO05D008275 8.4e-108 394.0 252 81.3
Solyc09g089880.3 Solanum lycopersicum HOM05D006457 ORTHO05D008275 1.4e-107 393.3 252 80.2
Eucgr.H00173 Eucalyptus grandis HOM05D006457 ORTHO05D008275 1.9e-107 392.9 252 79.8
Ciclev10005707m.g Citrus clementina HOM05D006457 ORTHO05D008275 4.2e-107 391.7 252 79.4
TPR.G26440 Trifolium pratense HOM05D006457 ORTHO05D008275 4.2e-107 391.7 252 81.0
Lj5g0021789 Lotus japonicus HOM05D006457 ORTHO05D008275 5.4e-107 391.3 252 81.0
Sopen09g032820 Solanum pennellii HOM05D006457 ORTHO05D008275 1.6e-106 389.8 252 80.6
SGA_v2.0_scaffold67G22771 Striga asiatica HOM05D006457 ORTHO05D008275 1.6e-106 389.8 283 73.1
THA.LOC104801088 Tarenaya hassleriana HOM05D006457 ORTHO05D008275 1.6e-106 389.8 252 79.0
CAN.G793.35 Capsicum annuum HOM05D006457 ORTHO05D008275 2.1e-106 389.4 252 79.0
arahy.Tifrunner.gnm1.ann1.YH23E2 Arachis hypogaea HOM05D006457 ORTHO05D008275 3.5e-106 388.7 250 80.4
Nitab4.5_0000342g0030 Nicotiana tabacum HOM05D006457 ORTHO05D008275 3.5e-106 388.7 252 79.0
Nitab4.5_0003897g0020 Nicotiana tabacum HOM05D006457 ORTHO05D008275 3.5e-106 388.7 252 79.4
HPP92_025980 Vanilla planifolia HOM05D006457 ORTHO05D008275 4.6e-106 388.3 253 77.5
arahy.Tifrunner.gnm1.ann1.AG4MDC Arachis hypogaea HOM05D006457 ORTHO05D008275 6.0e-106 387.9 252 79.8
Glyma.10G187300 Glycine max HOM05D006457 ORTHO05D008275 7.8e-106 387.5 252 79.4
Lsat_1_v5_gn_5_72441 Lactuca sativa HOM05D006457 ORTHO05D008275 1.7e-105 386.3 248 79.0
Lj6A662T59 Lonicera japonica HOM05D006457 ORTHO05D008275 1.7e-105 386.3 253 79.8
HanXRQChr05g0134481 Helianthus annuus HOM05D006457 ORTHO05D008275 2.3e-105 386.0 252 77.4
Phvul.007G128300 Phaseolus vulgaris HOM05D006457 ORTHO05D008275 2.3e-105 386.0 252 80.2
Lalb_Chr02g0150531 Lupinus albus HOM05D006457 ORTHO05D008275 3.9e-105 385.2 252 78.2
VMungo0720G2635 Vigna mungo HOM05D006457 ORTHO05D008275 6.6e-105 384.4 252 79.8
AT5G43430 Arabidopsis thaliana HOM05D006457 ORTHO05D008275 8.7e-105 384.0 252 78.6
Sp2g08310 Schrenkiella parvula HOM05D006457 ORTHO05D008275 8.7e-105 384.0 252 79.8
AL8G16870 Arabidopsis lyrata HOM05D006457 ORTHO05D008275 1.1e-104 383.6 252 78.6
Glyma.20G203200 Glycine max HOM05D006457 ORTHO05D008275 1.1e-104 383.6 252 78.6
CARHR180150 Cardamine hirsuta HOM05D006457 ORTHO05D008275 1.5e-104 383.3 252 77.8
Ca_09820_v3 Cicer arietinum L. HOM05D006457 ORTHO05D008275 2.5e-104 382.5 281 74.0
Sabra08G0126300 Salix brachista HOM05D006457 ORTHO05D008275 4.3e-104 381.7 283 72.8
Thhalv10003253m.g Eutrema salsugineum HOM05D006457 ORTHO05D008275 7.3e-104 380.9 252 78.6
Carub.0008s0516 Capsella rubella HOM05D006457 ORTHO05D008275 9.6e-104 380.6 252 77.4
Pp3c16_12620 Physcomitrium patens HOM05D006457 ORTHO05D008275 3.6e-103 378.6 252 77.0
BcaC04g21915 Brassica carinata HOM05D006457 ORTHO05D008275 1.1e-102 377.1 252 78.6
FAN17G1464 Fragaria x ananassa HOM05D006457 ORTHO05D008275 1.8e-102 376.3 252 79.0
Aa31LG5G3680 Aethionema arabicum HOM05D006457 ORTHO05D008275 2.4e-102 375.9 252 76.6
Dinv27040 Davidia involucrata HOM05D006457 ORTHO05D008275 5.3e-102 374.8 239 80.3
BolC9t55493H Brassica oleracea HOM05D006457 ORTHO05D008275 1.2e-101 373.6 249 79.1
Mapoly0061s0138 Marchantia polymorpha HOM05D006457 ORTHO05D008275 1.5e-101 373.2 252 77.8
A09p20470 Brassica napus HOM05D006457 ORTHO05D008275 2.6e-101 372.5 249 79.1
BcaB07g31008 Brassica carinata HOM05D006457 ORTHO05D008275 3.4e-101 372.1 254 78.0
C09p25850 Brassica napus HOM05D006457 ORTHO05D008275 1.3e-100 370.2 249 78.7
Os04g0182800 Oryza sativa ssp. japonica HOM05D006457 ORTHO05D008275 4.9e-100 368.2 256 74.6
Zm00001eb419600 Zea mays HOM05D006457 ORTHO05D008275 4.9e-100 368.2 256 74.2
BraA09t37652Z Brassica rapa HOM05D006457 ORTHO05D008275 7.1e-99 364.4 259 76.1
SMO145G0254 Selaginella moellendorffii HOM05D006457 ORTHO05D008275 6.0e-98 361.3 254 72.8
AagrBONN_evm.TU.Sc2ySwM_228.708 Anthoceros agrestis HOM05D006457 ORTHO05D008275 1.8e-97 359.8 252 75.8
AUR62028231 Chenopodium quinoa HOM05D006457 ORTHO05D008275 5.3e-94 348.2 221 81.0
FAN12G4283 Fragaria x ananassa HOM05D006457 ORTHO05D008275 1.1e-91 340.5 272 70.2
SHI00666 Sapria himalayana HOM05D006457 ORTHO05D008275 7.9e-90 334.3 267 66.7
Cpa.g.sc44.77 Carica papaya HOM05D006457 ORTHO05D008275 9.0e-86 320.9 260 66.9
TWI73G0230 Tripterygium wilfordii HOM05D006457 ORTHO05D008275 2.9e-84 315.8 252 67.5
SalBow3G1824 Salvia bowleyana HOM05D006457 ORTHO05D008275 1.6e-82 310.1 274 64.2
unitig_748.g7323 Utricularia gibba HOM05D006457 ORTHO05D008275 1.3e-81 307.0 191 81.2
Dinv29877 Davidia involucrata HOM05D006457 ORTHO05D008275 4.1e-78 295.4 177 83.6
Gohir.D09G057800 Gossypium hirsutum HOM05D006457 ORTHO05D008275 5.3e-78 295.0 190 78.9
Haze_27028 Corylus avellana HOM05D006457 ORTHO05D008275 6.9e-78 294.7 252 60.7
Hma1.2p1_0267F.1_g107350 Hydrangea macrophylla HOM05D006457 ORTHO05D008275 7.7e-77 291.2 176 83.0
THA.LOC104826077 Tarenaya hassleriana HOM05D006457 ORTHO05D008275 5.0e-76 288.5 240 66.2
CiPaw.02G113800 Carya illinoinensis HOM05D006457 ORTHO05D008275 3.2e-75 285.8 177 82.5
Cre12.g554953 Chlamydomonas reinhardtii HOM05D006457 ORTHO05D008275 2.3e-73 279.6 278 55.4
PRCOL_00002410 Prasinoderma coloniale HOM05D006457 ORTHO05D008275 3.7e-71 272.3 255 56.5
Haze_26122 Corylus avellana HOM05D006457 ORTHO05D008275 4.4e-64 248.8 254 53.5
Haze_27526 Corylus avellana HOM05D006457 ORTHO05D008275 4.8e-63 245.4 252 55.2
CDE05G1545 Ceratophyllum demersum HOM05D006457 ORTHO05D008275 3.1e-62 242.7 146 84.2
CANSAT78G2507 Cannabis sativa HOM05D006457 ORTHO05D008275 6.5e-60 235.0 145 80.7
Cfa021602 Carpinus fangiana HOM05D006457 ORTHO05D008275 1.2e-53 214.2 254 47.2
Zm00001eb087650 Zea mays HOM05D006457 ORTHO05D008275 1.8e-49 200.3 123 80.5
Oeu011992.1 Olea europaea HOM05D006457 ORTHO05D008275 2.8e-34 149.8 86 88.4
MD16G1216100 Malus domestica HOM05D006457 ORTHO05D008275 2.6e-32 143.3 91 75.8
HanXRQChr03g0066771 Helianthus annuus HOM05D006457 ORTHO05D008275 4.4e-32 142.5 96 71.9
Oeu063893.1 Olea europaea HOM05D006457 ORTHO05D000397 6.1e-26 122.1 105 63.8
MBI15_g29425_MAGBIO Magnolia biondii HOM05D016614 ORTHO05D012466 8.9e-17 91.7 68 64.7
Hma1.2p1_0267F.1_g107370 Hydrangea macrophylla HOM05D006457 ORTHO05D008275 2.3e-12 77.0 49 79.6
RcHm_v2.0_Chr5g0058341 Rosa chinensis HOM05D006457 ORTHO05D008275 1.4e-09 67.8 34 85.3
VMungo0720G2370 Vigna mungo HOM05D006457 ORTHO05D008275 6.8e-09 65.5 69 56.5


User provided reference genes

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