Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0680G038 Amborella trichopoda HOM05D007576 ORTHO05D009576 0.0e+00 1198.0 615 100.0
Potri.011G050600 Populus trichocarpa HOM05D007576 ORTHO05D009576 2.7e-91 340.5 564 40.1
Sabra11G0034500 Salix brachista HOM05D007576 ORTHO05D009576 1.6e-88 331.3 566 41.2
PSO675G5421 Papaver somniferum HOM05D007576 ORTHO05D009576 6.2e-88 329.3 580 40.0
Aqoxy1G02531 Aquilegia oxysepala HOM05D007576 ORTHO05D009576 1.8e-87 327.8 425 48.7
Aqoxy1G02534 Aquilegia oxysepala HOM05D007576 ORTHO05D009576 1.8e-87 327.8 425 48.7
Cfa000420 Carpinus fangiana HOM05D007576 ORTHO05D009576 1.5e-86 324.7 553 40.0
Nn1g06600 Nelumbo nucifera HOM05D007576 ORTHO05D009576 1.5e-86 324.7 305 56.7
Dinv07540 Davidia involucrata HOM05D007576 ORTHO05D009576 7.6e-86 322.4 557 38.6
Manes.17G043700 Manihot esculenta HOM05D007576 ORTHO05D009576 7.6e-86 322.4 258 63.6
Prupe.4G044400 Prunus persica HOM05D007576 ORTHO05D009576 1.3e-85 321.6 273 60.4
MD05G1314800 Malus domestica HOM05D007576 ORTHO05D009576 1.7e-85 321.2 515 42.7
PSO541G6317 Papaver somniferum HOM05D007576 ORTHO05D009576 2.2e-85 320.9 423 45.6
TWI38G1553 Tripterygium wilfordii HOM05D007576 ORTHO05D009576 4.9e-85 319.7 554 40.4
FAN25G3788 Fragaria x ananassa HOM05D007576 ORTHO05D009576 1.1e-84 318.5 560 38.8
QL05p039732 Quercus lobata HOM05D007576 ORTHO05D009576 1.9e-84 317.8 504 41.7
FAN21G0504 Fragaria x ananassa HOM05D007576 ORTHO05D009576 2.4e-84 317.4 560 38.9
GSVIVG01002036001 Vitis vinifera HOM05D007576 ORTHO05D009576 2.4e-84 317.4 258 64.3
FAN11G2000 Fragaria x ananassa HOM05D007576 ORTHO05D009576 4.2e-84 316.6 560 38.4
CiPaw.09G057800 Carya illinoinensis HOM05D007576 ORTHO05D009576 7.1e-84 315.8 558 40.0
COL.COLO4_31497 Corchorus olitorius HOM05D007576 ORTHO05D009576 4.6e-83 313.2 262 62.6
FvH4_3g04910 Fragaria vesca HOM05D007576 ORTHO05D009576 6.0e-83 312.8 560 38.2
RcHm_v2.0_Chr5g0008071 Rosa chinensis HOM05D007576 ORTHO05D009576 7.8e-83 312.4 421 45.8
FAN16G1901 Fragaria x ananassa HOM05D007576 ORTHO05D009576 1.0e-82 312.0 560 38.8
MBI18_g17005_MAGBIO Magnolia biondii HOM05D007576 ORTHO05D009576 1.0e-82 312.0 439 44.6
Phvul.003G161900 Phaseolus vulgaris HOM05D007576 ORTHO05D009576 1.3e-82 311.6 398 47.0
RhsimUnG0044800 Rhododendron simsii HOM05D007576 ORTHO05D009576 1.7e-82 311.2 536 39.6
Thecc.06G190300 Theobroma cacao HOM05D007576 ORTHO05D009576 1.7e-82 311.2 255 61.6
Duzib192G1068 Durio zibethinus HOM05D007576 ORTHO05D009576 2.3e-82 310.8 388 48.2
MD10G1296200 Malus domestica HOM05D007576 ORTHO05D009576 3.0e-82 310.5 504 42.1
CANSAT35G0220 Cannabis sativa HOM05D007576 ORTHO05D009576 3.9e-82 310.1 501 40.7
Eucgr.E03347 Eucalyptus grandis HOM05D007576 ORTHO05D009576 3.9e-82 310.1 265 61.1
MSTRG.15916 Avicennia marina HOM05D007576 ORTHO05D009576 8.7e-82 308.9 506 41.5
Zm00001eb229030 Zea mays HOM05D007576 ORTHO05D009576 1.9e-81 307.8 256 61.3
Lj1A1207T83 Lonicera japonica HOM05D007576 ORTHO05D009576 2.5e-81 307.4 542 39.1
CSS0005805 Camellia sinensis var. sinensis HOM05D007576 ORTHO05D009576 3.3e-81 307.0 327 52.6
CDE01G0107 Ceratophyllum demersum HOM05D007576 ORTHO05D009576 4.3e-81 306.6 266 60.2
Glyma.17G117500 Glycine max HOM05D007576 ORTHO05D009576 4.3e-81 306.6 558 39.2
VMungo1215G0476 Vigna mungo HOM05D007576 ORTHO05D009576 7.3e-81 305.8 423 44.2
Sc05g0007790 Simmondsia chinensis HOM05D007576 ORTHO05D009576 2.1e-80 304.3 333 53.8
Cpa.g.sc1598.2 Carica papaya HOM05D007576 ORTHO05D009576 2.8e-80 303.9 542 38.2
Medtr4g113740 Medicago truncatula HOM05D007576 ORTHO05D009576 1.8e-79 301.2 350 49.7
CsaV3_6G050020 Cucumis sativus L. HOM05D007576 ORTHO05D009576 2.4e-79 300.8 506 40.3
Glyma.05G009500 Glycine max HOM05D007576 ORTHO05D009576 3.1e-79 300.4 647 37.6
Lsat_1_v5_gn_4_52541 Lactuca sativa HOM05D007576 ORTHO05D009576 3.1e-79 300.4 524 39.7
Os06g0731700 Oryza sativa ssp. japonica HOM05D007576 ORTHO05D009576 3.1e-79 300.4 259 58.3
Ca_21702_v3 Cicer arietinum L. HOM05D007576 ORTHO05D009576 4.0e-79 300.1 536 38.8
Migut.M01192 Erythranthe guttata HOM05D007576 ORTHO05D009576 5.3e-79 299.7 525 39.2
Hund21235 Selenicereus undatus HOM05D007576 ORTHO05D009576 5.3e-79 299.7 550 37.6
Lj4g0015142 Lotus japonicus HOM05D007576 ORTHO05D009576 6.9e-79 299.3 567 38.3
ECA234G2395 Erigeron canadensis HOM05D007576 ORTHO05D009576 2.0e-78 297.7 321 54.2
Gohir.A06G126300 Gossypium hirsutum HOM05D007576 ORTHO05D009576 2.6e-78 297.4 318 52.2
DCAR_008044 Daucus carota HOM05D007576 ORTHO05D009576 3.4e-78 297.0 257 59.5
HanXRQChr16g0518181 Helianthus annuus HOM05D007576 ORTHO05D009576 3.4e-78 297.0 274 58.4
TPR.G10703 Trifolium pratense HOM05D007576 ORTHO05D009576 3.4e-78 297.0 259 59.8
SGA_v2.0_scaffold7G03972 Striga asiatica HOM05D007576 ORTHO05D009576 5.8e-78 296.2 510 40.8
ClCG01G022850 Citrullus lanatus HOM05D007576 ORTHO05D009576 7.6e-78 295.8 363 48.2
MELO3C007295.2 Cucumis melo HOM05D007576 ORTHO05D009576 9.9e-78 295.4 504 39.7
Gohir.D06G131100 Gossypium hirsutum HOM05D007576 ORTHO05D009576 1.3e-77 295.0 318 51.9
Gorai.010G153000 Gossypium raimondii HOM05D007576 ORTHO05D009576 1.3e-77 295.0 318 51.9
Lalb_Chr13g0302021 Lupinus albus HOM05D007576 ORTHO05D009576 1.3e-77 295.0 399 45.1
Psat4g041840 Pisum sativum HOM05D007576 ORTHO05D009576 2.2e-77 294.3 559 36.1
arahy.Tifrunner.gnm1.ann1.TJT9YV Arachis hypogaea HOM05D007576 ORTHO05D009576 2.9e-77 293.9 393 46.1
Sed0017500 Sechium edule HOM05D007576 ORTHO05D009576 2.9e-77 293.9 363 46.8
CAN.G1164.10 Capsicum annuum HOM05D007576 ORTHO05D009576 1.4e-76 291.6 545 39.1
Ciclev10014397m.g Citrus clementina HOM05D007576 ORTHO05D009576 1.4e-76 291.6 561 37.3
Cc02_g13130 Coffea canephora HOM05D007576 ORTHO05D009576 1.4e-76 291.6 579 36.6
arahy.Tifrunner.gnm1.ann1.TJX0PA Arachis hypogaea HOM05D007576 ORTHO05D009576 2.4e-76 290.8 393 46.8
EL10Ac8g20358 Beta vulgaris HOM05D007576 ORTHO05D009576 2.4e-76 290.8 313 49.8
Peaxi162Scf00947g00422 Petunia axillaris HOM05D007576 ORTHO05D009576 2.4e-76 290.8 258 59.7
Ah.14g089350 Amaranthus hybridus HOM05D007576 ORTHO05D009576 3.2e-76 290.4 332 50.6
Nitab4.5_0001357g0010 Nicotiana tabacum HOM05D007576 ORTHO05D009576 5.4e-76 289.7 256 58.6
Oeu038219.1 Olea europaea HOM05D007576 ORTHO05D009576 2.1e-75 287.7 240 64.2
AUR62014798 Chenopodium quinoa HOM05D007576 ORTHO05D009576 6.0e-75 286.2 411 42.3
Nitab4.5_0009493g0040 Nicotiana tabacum HOM05D007576 ORTHO05D009576 6.0e-75 286.2 336 49.7
SalBow8G3709 Salvia bowleyana HOM05D007576 ORTHO05D009576 6.0e-75 286.2 355 49.0
PGSC0003DMG400022439 Solanum tuberosum HOM05D007576 ORTHO05D009576 7.8e-75 285.8 291 54.3
Sopen02g023320 Solanum pennellii HOM05D007576 ORTHO05D009576 3.9e-74 283.5 333 48.3
AUR62016989 Chenopodium quinoa HOM05D007576 ORTHO05D009576 2.5e-73 280.8 406 42.4
HPP92_014806 Vanilla planifolia HOM05D007576 ORTHO05D009576 5.6e-73 279.6 367 46.0
PGR042G0577 Punica granatum HOM05D007576 ORTHO05D009576 4.0e-63 246.9 261 51.3
Pp3c11_25570 Physcomitrium patens HOM05D007576 ORTHO05D009576 1.6e-59 235.0 260 49.6
Mapoly0181s0007 Marchantia polymorpha HOM05D007576 ORTHO05D009576 8.7e-58 229.2 258 47.7
Ciclev10008775m.g Citrus clementina HOM05D007576 ORTHO05D009576 8.4e-53 212.6 347 41.2
CSS0010553 Camellia sinensis var. sinensis HOM05D007576 ORTHO05D009576 1.6e-51 208.4 309 43.7
Haze_06496 Corylus avellana HOM05D007576 ORTHO05D009576 3.9e-50 203.8 465 34.6
Duzib235G0673 Durio zibethinus HOM05D007576 ORTHO05D009576 6.3e-40 169.9 155 57.4
Ciclev10009735m.g Citrus clementina HOM05D007576 ORTHO05D009576 3.2e-36 157.5 157 54.1
CBR_g49326 Chara braunii HOM05D007576 ORTHO05D000002 5.2e-26 123.6 191 40.3
Solyc02g078470.4 Solanum lycopersicum HOM05D007576 ORTHO05D009576 4.8e-24 117.1 99 56.6
SEGI_32076 Sequoiadendron giganteum HOM05D007576 ORTHO05D009576 1.5e-20 105.5 89 60.7
Atru.chr10.1919 Acer truncatum HOM05D007576 ORTHO05D009576 2.6e-17 94.7 439 26.2
Lj2g0021670 Lotus japonicus HOM05D007576 ORTHO05D009576 6.3e-16 90.1 169 36.7
ECA247G2871 Erigeron canadensis HOM05D000526 ORTHO05D000956 1.8e-15 88.6 80 56.2
Atru.chr10.1928 Acer truncatum HOM05D007576 ORTHO05D009576 1.7e-13 82.0 283 30.7
Cre13.g589167 Chlamydomonas reinhardtii HOM05D007576 ORTHO05D009576 6.3e-08 63.5 264 25.8
MCO14G177 Micromonas commoda HOM05D004623 ORTHO05D005100 1.8e-07 62.0 172 29.1


User provided reference genes

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