Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0665G623 Amborella trichopoda HOM05D000558 ORTHO05D003075 8.4e-73 276.9 141 100.0
ATR0796G064 Amborella trichopoda HOM05D000558 ORTHO05D003075 6.7e-22 107.8 84 67.9
Dinv37004 Davidia involucrata HOM05D000558 ORTHO05D003075 4.8e-12 75.1 80 46.2
TAR362G1123 Trochodendron aralioides HOM05D000558 ORTHO05D003075 2.4e-11 72.8 83 49.4
CAN.G415.6 Capsicum annuum HOM05D000558 ORTHO05D003075 3.1e-11 72.4 80 45.0
Actinidia22100 Actinidia chinensis HOM05D000558 ORTHO05D003075 4.1e-11 72.0 80 43.8
CANSAT78G1454 Cannabis sativa HOM05D000558 ORTHO05D003075 9.1e-11 70.9 81 42.0
Rhsim04G0085200 Rhododendron simsii HOM05D000558 ORTHO05D003075 9.1e-11 70.9 80 46.2
SEGI_05353 Sequoiadendron giganteum HOM05D000558 ORTHO05D003075 9.1e-11 70.9 85 48.2
Oeu050292.1 Olea europaea HOM05D000558 ORTHO05D003075 1.2e-10 70.5 80 42.5
Oeu050293.1 Olea europaea HOM05D000558 ORTHO05D003075 1.2e-10 70.5 80 42.5
QL07p020821 Quercus lobata HOM05D000558 ORTHO05D003075 1.2e-10 70.5 80 46.2
SGA_v2.0_scaffold12G06252 Striga asiatica HOM05D000558 ORTHO05D003075 1.6e-10 70.1 79 44.3
PSO170G1677 Papaver somniferum HOM05D000558 ORTHO05D003075 2.0e-10 69.7 85 47.1
PSO357G0258 Papaver somniferum HOM05D000558 ORTHO05D003075 2.0e-10 69.7 85 47.1
CDE05G0757 Ceratophyllum demersum HOM05D000558 ORTHO05D003075 2.6e-10 69.3 82 51.2
CiPaw.03G236300 Carya illinoinensis HOM05D000558 ORTHO05D003075 3.5e-10 68.9 82 47.6
DCAR_019901 Daucus carota HOM05D000558 ORTHO05D003075 3.5e-10 68.9 80 45.0
Lsat_1_v5_gn_1_59001 Lactuca sativa HOM05D000558 ORTHO05D003075 3.5e-10 68.9 80 47.5
Nitab4.5_0000001g0350 Nicotiana tabacum HOM05D000558 ORTHO05D003075 4.5e-10 68.6 80 40.0
Oeu014723.2 Olea europaea HOM05D000558 ORTHO05D003075 4.5e-10 68.6 80 41.2
HPP92_017318 Vanilla planifolia HOM05D000558 ORTHO05D003075 4.5e-10 68.6 81 46.9
FvH4_6g00600 Fragaria vesca HOM05D000558 ORTHO05D003075 5.9e-10 68.2 80 43.8
FAN09G1157 Fragaria x ananassa HOM05D000558 ORTHO05D003075 5.9e-10 68.2 80 43.8
Prupe.7G000900 Prunus persica HOM05D000558 ORTHO05D003075 5.9e-10 68.2 81 42.0
SalBow3G2963 Salvia bowleyana HOM05D000558 ORTHO05D003075 5.9e-10 68.2 85 41.2
Actinidia17314 Actinidia chinensis HOM05D000558 ORTHO05D003075 1.3e-09 67.0 80 47.5
Haze_19391 Corylus avellana HOM05D000558 ORTHO05D003075 1.7e-09 66.6 81 42.0
Lj1A1140T42 Lonicera japonica HOM05D000558 ORTHO05D003075 1.7e-09 66.6 80 45.0
unitig_0.g2408 Utricularia gibba HOM05D002780 ORTHO05D003254 1.7e-09 66.6 103 38.8
HanXRQChr01g0024451 Helianthus annuus HOM05D000558 ORTHO05D003075 2.2e-09 66.2 80 45.0
MD14G1000500 Malus domestica HOM05D000558 ORTHO05D003075 2.2e-09 66.2 81 42.0
HPP92_016975 Vanilla planifolia HOM05D000558 ORTHO05D003075 2.2e-09 66.2 80 43.8
Cfa021586 Carpinus fangiana HOM05D000558 ORTHO05D001857 2.9e-09 65.9 84 41.7
ECA248G2202 Erigeron canadensis HOM05D000558 ORTHO05D001857 2.9e-09 65.9 80 46.2
FAN14G5661 Fragaria x ananassa HOM05D000558 ORTHO05D003075 2.9e-09 65.9 80 42.5
MBI18_g38872_MAGBIO Magnolia biondii HOM05D000558 ORTHO05D003075 2.9e-09 65.9 80 46.2
ClCG04G005220 Citrullus lanatus HOM05D000558 ORTHO05D003075 3.8e-09 65.5 81 45.7
Sed0009629 Sechium edule HOM05D000558 ORTHO05D003075 3.8e-09 65.5 81 42.0
MELO3C008793.2 Cucumis melo HOM05D000558 ORTHO05D003075 5.0e-09 65.1 82 43.9
CsaV3_4G013360 Cucumis sativus L. HOM05D000558 ORTHO05D003075 5.0e-09 65.1 82 43.9
Lalb_Chr24g0403071 Lupinus albus HOM05D000558 ORTHO05D003075 5.0e-09 65.1 86 39.5
Hund03237 Selenicereus undatus HOM05D000558 ORTHO05D003075 5.0e-09 65.1 80 43.8
RcHm_v2.0_Chr3g0497551 Rosa chinensis HOM05D000558 ORTHO05D003075 6.5e-09 64.7 82 42.7
Actinidia38626 Actinidia chinensis HOM05D000558 ORTHO05D003075 8.5e-09 64.3 80 46.2
Eucgr.A02066 Eucalyptus grandis HOM05D000558 ORTHO05D003075 8.5e-09 64.3 87 41.4
TAR629G1433 Trochodendron aralioides HOM05D000558 ORTHO05D003075 8.5e-09 64.3 83 48.2
FAN02G4255 Fragaria x ananassa HOM05D000558 ORTHO05D003075 1.1e-08 63.9 86 44.2
PGSC0003DMG400018823 Solanum tuberosum HOM05D000558 ORTHO05D003075 1.1e-08 63.9 80 41.2
Ca_08247_v3 Cicer arietinum L. HOM05D000558 ORTHO05D001857 1.5e-08 63.5 90 41.1
Cc00_g09500 Coffea canephora HOM05D000558 ORTHO05D003075 1.5e-08 63.5 82 41.5
Lj2g0008883 Lotus japonicus HOM05D000558 ORTHO05D003075 1.5e-08 63.5 86 41.9
SEGI_03525 Sequoiadendron giganteum HOM05D000558 ORTHO05D003075 1.5e-08 63.5 85 44.7
DCAR_009669 Daucus carota HOM05D000558 ORTHO05D003075 1.9e-08 63.2 80 38.8
Gohir.A07G219200 Gossypium hirsutum HOM05D000558 ORTHO05D003075 1.9e-08 63.2 88 42.0
MD09G1110400 Malus domestica HOM05D000558 ORTHO05D003075 1.9e-08 63.2 81 42.0
RcHm_v2.0_Chr2g0159011 Rosa chinensis HOM05D000558 ORTHO05D003075 1.9e-08 63.2 86 44.2
Aqoxy5G02901 Aquilegia oxysepala HOM05D000558 ORTHO05D003075 2.5e-08 62.8 86 44.2
DCAR_019902 Daucus carota HOM05D004211 ORTHO05D005559 2.5e-08 62.8 89 40.4
Migut.G00789 Erythranthe guttata HOM05D000558 ORTHO05D003075 2.5e-08 62.8 85 44.7
Peaxi162Scf00003g04830 Petunia axillaris HOM05D000558 ORTHO05D003075 2.5e-08 62.8 80 40.0
Glyma.16G043800 Glycine max HOM05D000558 ORTHO05D003075 3.2e-08 62.4 86 38.4
Glyma.19G108400 Glycine max HOM05D000558 ORTHO05D003075 3.2e-08 62.4 86 38.4
Zm00001eb167790 Zea mays HOM05D000558 ORTHO05D003075 3.2e-08 62.4 83 43.4
Nitab4.5_0010699g0010 Nicotiana tabacum HOM05D000558 ORTHO05D003075 4.2e-08 62.0 80 37.5
arahy.Tifrunner.gnm1.ann1.I0HFQI Arachis hypogaea HOM05D000558 ORTHO05D003075 5.5e-08 61.6 86 39.5
arahy.Tifrunner.gnm1.ann1.K4UY0G Arachis hypogaea HOM05D000558 ORTHO05D003075 5.5e-08 61.6 86 39.5
AUR62028020 Chenopodium quinoa HOM05D000558 ORTHO05D003075 5.5e-08 61.6 80 41.2
Lj2A356T43 Lonicera japonica HOM05D000558 ORTHO05D003075 5.5e-08 61.6 80 47.5
Lj1g0000038 Lotus japonicus HOM05D000558 ORTHO05D003075 5.5e-08 61.6 86 40.7
VMungo0464G1828 Vigna mungo HOM05D000558 ORTHO05D003075 5.5e-08 61.6 86 38.4
CiPaw.04G114900 Carya illinoinensis HOM05D000558 ORTHO05D003075 7.2e-08 61.2 81 42.0
Ciclev10021916m.g Citrus clementina HOM05D000558 ORTHO05D003075 7.2e-08 61.2 81 43.2
DCAR_013699 Daucus carota HOM05D000558 ORTHO05D001857 7.2e-08 61.2 80 40.0
FvH4_6g43020 Fragaria vesca HOM05D000558 ORTHO05D003075 7.2e-08 61.2 86 41.9
Nn4g25032 Nelumbo nucifera HOM05D000558 ORTHO05D003075 7.2e-08 61.2 79 44.3
QL08p032717 Quercus lobata HOM05D000558 ORTHO05D003075 7.2e-08 61.2 82 46.3
Thecc.10G161200 Theobroma cacao HOM05D000558 ORTHO05D003075 7.2e-08 61.2 81 43.2
TWI36G0938 Tripterygium wilfordii HOM05D000558 ORTHO05D003075 7.2e-08 61.2 85 43.5
CiPaw.03G159200 Carya illinoinensis HOM05D000558 ORTHO05D003075 9.4e-08 60.8 81 42.0
FAN09G4078 Fragaria x ananassa HOM05D000558 ORTHO05D003075 9.4e-08 60.8 86 41.9
Lalb_Chr22g0359461 Lupinus albus HOM05D000558 ORTHO05D003075 9.4e-08 60.8 86 38.4
Solyc12g019690.2 Solanum lycopersicum HOM05D000558 ORTHO05D003075 9.4e-08 60.8 80 40.0
FAN14G1295 Fragaria x ananassa HOM05D000558 ORTHO05D003075 1.2e-07 60.5 86 41.9
Medtr7g085070 Medicago truncatula HOM05D000558 ORTHO05D003075 1.2e-07 60.5 86 37.2
Peaxi162Scf00076g00715 Petunia axillaris HOM05D000558 ORTHO05D003075 1.2e-07 60.5 80 40.0
PGR042G0364 Punica granatum HOM05D000558 ORTHO05D003075 1.2e-07 60.5 81 39.5
Solyc10g078490.2 Solanum lycopersicum HOM05D000558 ORTHO05D003075 1.2e-07 60.5 80 36.2
AUR62020704 Chenopodium quinoa HOM05D000558 ORTHO05D003075 1.6e-07 60.1 80 40.0
Gorai.012G017700 Gossypium raimondii HOM05D000558 ORTHO05D003075 1.6e-07 60.1 88 39.8
HanXRQChr14g0437991 Helianthus annuus HOM05D000558 ORTHO05D003075 1.6e-07 60.1 79 44.3
ATR0568G170 Amborella trichopoda HOM05D000558 ORTHO05D003075 2.1e-07 59.7 79 45.6
Glyma.02G069800 Glycine max HOM05D000558 ORTHO05D003075 2.1e-07 59.7 86 39.5
Gorai.009G226500 Gossypium raimondii HOM05D000558 ORTHO05D003075 2.1e-07 59.7 88 39.8
TPR.G5889 Trifolium pratense HOM05D000558 ORTHO05D003075 2.1e-07 59.7 85 40.0
Aa31LG5G14650 Aethionema arabicum HOM05D000558 ORTHO05D003075 2.7e-07 59.3 81 43.2
Cfa014385 Carpinus fangiana HOM05D000558 ORTHO05D003075 2.7e-07 59.3 81 43.2
Duzib128G0160 Durio zibethinus HOM05D000558 ORTHO05D003075 2.7e-07 59.3 81 44.4
Gohir.D04G015200 Gossypium hirsutum HOM05D000558 ORTHO05D003075 2.7e-07 59.3 88 39.8
Nitab4.5_0007223g0030 Nicotiana tabacum HOM05D000558 ORTHO05D003075 2.7e-07 59.3 87 35.6
Zm00001eb349840 Zea mays HOM05D000558 ORTHO05D003075 2.7e-07 59.3 82 43.9
Atru.chr2.1256 Acer truncatum HOM05D000558 ORTHO05D003075 4.7e-07 58.5 81 40.7
Gohir.D05G219500 Gossypium hirsutum HOM05D000558 ORTHO05D003075 4.7e-07 58.5 88 38.6
MD17G1098100 Malus domestica HOM05D000558 ORTHO05D003075 4.7e-07 58.5 81 38.3
Nitab4.5_0000812g0160 Nicotiana tabacum HOM05D000558 ORTHO05D003075 4.7e-07 58.5 80 37.5
Ciclev10005734m.g Citrus clementina HOM05D000558 ORTHO05D003075 6.1e-07 58.2 81 42.0
Duzib177G0778 Durio zibethinus HOM05D000558 ORTHO05D003075 6.1e-07 58.2 81 40.7
Glyma.16G151300 Glycine max HOM05D000558 ORTHO05D003075 6.1e-07 58.2 86 38.4
Potri.019G030900 Populus trichocarpa HOM05D000558 ORTHO05D003075 6.1e-07 58.2 81 39.5
QL93p2020_0031 Quercus lobata HOM05D000558 ORTHO05D003075 6.1e-07 58.2 83 44.6
Sopen12g009990 Solanum pennellii HOM05D000558 ORTHO05D003075 6.1e-07 58.2 80 38.8
Psat3g091120 Pisum sativum HOM05D000558 ORTHO05D003075 8.0e-07 57.8 86 36.0
CAN.G960.54 Capsicum annuum HOM05D000558 ORTHO05D003075 1.0e-06 57.4 81 35.8
Duzib128G0273 Durio zibethinus HOM05D000558 ORTHO05D003075 1.0e-06 57.4 81 39.5
HanXRQChr13g0397611 Helianthus annuus HOM05D000558 ORTHO05D003075 1.0e-06 57.4 79 40.5
Phvul.001G097000 Phaseolus vulgaris HOM05D000558 ORTHO05D003075 1.0e-06 57.4 90 35.6
Phvul.004G077700 Phaseolus vulgaris HOM05D000558 ORTHO05D003075 1.0e-06 57.4 86 39.5
Prupe.3G216100 Prunus persica HOM05D000558 ORTHO05D003075 1.0e-06 57.4 81 39.5
Ah.10g033650 Amaranthus hybridus HOM05D000558 ORTHO05D003075 1.4e-06 57.0 80 37.5
Duzib114G0172 Durio zibethinus HOM05D000558 ORTHO05D003075 1.4e-06 57.0 81 44.4
Lsat_1_v5_gn_6_38381 Lactuca sativa HOM05D000558 ORTHO05D003075 1.4e-06 57.0 79 43.0
Sabra19G0037500 Salix brachista HOM05D000558 ORTHO05D003075 1.4e-06 57.0 81 37.0
Sabra19G0040000 Salix brachista HOM05D000558 ORTHO05D003075 1.4e-06 57.0 81 37.0
Atru.chr5.346 Acer truncatum HOM05D000558 ORTHO05D003075 1.8e-06 56.6 81 39.5
EL10Ac2g03644 Beta vulgaris HOM05D000558 ORTHO05D003075 1.8e-06 56.6 80 37.5
Duzib106G1557 Durio zibethinus HOM05D000558 ORTHO05D003075 1.8e-06 56.6 81 38.3
Lsat_1_v5_gn_2_59281 Lactuca sativa HOM05D000558 ORTHO05D003075 1.8e-06 56.6 68 48.5
Potri.013G053400 Populus trichocarpa HOM05D000558 ORTHO05D003075 1.8e-06 56.6 81 40.7
Sc06g0001430 Simmondsia chinensis HOM05D000558 ORTHO05D003075 1.8e-06 56.6 87 40.2
PGR042G1586 Punica granatum HOM05D000558 ORTHO05D003075 2.3e-06 56.2 86 37.2
Gohir.A10G184600 Gossypium hirsutum HOM05D000558 ORTHO05D003075 3.0e-06 55.8 86 40.7
Gohir.A13G166900 Gossypium hirsutum HOM05D000558 ORTHO05D003075 3.0e-06 55.8 80 40.0
Gohir.D13G170400 Gossypium hirsutum HOM05D000558 ORTHO05D003075 3.0e-06 55.8 80 41.2
TWI60G1089 Tripterygium wilfordii HOM05D000558 ORTHO05D003075 3.0e-06 55.8 81 38.3
Manes.13G069750 Manihot esculenta HOM05D000558 ORTHO05D003075 4.0e-06 55.5 81 42.0
Zm00001eb005410 Zea mays HOM05D000558 ORTHO05D003075 4.0e-06 55.5 85 41.2
CANSAT64G2334 Cannabis sativa HOM05D000558 ORTHO05D003075 5.2e-06 55.1 121 35.5
Manes.09G144400 Manihot esculenta HOM05D000558 ORTHO05D003075 5.2e-06 55.1 81 39.5
VMungo1383G0665 Vigna mungo HOM05D000558 ORTHO05D003075 5.2e-06 55.1 86 33.7
CAN.G960.53 Capsicum annuum HOM05D000558 ORTHO05D003075 6.7e-06 54.7 80 38.8
Gorai.013G191500 Gossypium raimondii HOM05D000558 ORTHO05D003075 6.7e-06 54.7 80 40.0
Gorai.011G214600 Gossypium raimondii HOM05D000558 ORTHO05D003075 8.8e-06 54.3 86 39.5
Medtr6g033010 Medicago truncatula HOM05D000558 ORTHO05D003075 8.8e-06 54.3 88 37.5


User provided reference genes

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