Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0665G610 Amborella trichopoda HOM05D006347 ORTHO05D007835 8.2e-277 956.4 491 100.0
Thecc.09G294500 Theobroma cacao HOM05D006347 ORTHO05D007835 5.1e-109 399.1 492 47.8
CiPaw.14G105000 Carya illinoinensis HOM05D006347 ORTHO05D007835 6.2e-107 392.1 521 44.9
MD11G1153600 Malus domestica HOM05D006347 ORTHO05D007835 8.1e-107 391.7 506 46.4
QL01p014117 Quercus lobata HOM05D006347 ORTHO05D007835 8.1e-107 391.7 513 45.6
Dinv29404 Davidia involucrata HOM05D006347 ORTHO05D007835 1.1e-106 391.3 487 48.0
RcHm_v2.0_Chr5g0055941 Rosa chinensis HOM05D006347 ORTHO05D007835 5.8e-105 385.6 509 45.2
Duzib168G1158 Durio zibethinus HOM05D006347 ORTHO05D007835 2.9e-104 383.3 479 46.3
Gorai.001G118600 Gossypium raimondii HOM05D006347 ORTHO05D007835 3.8e-104 382.9 489 45.8
GSVIVG01031423001 Vitis vinifera HOM05D006347 ORTHO05D007835 8.4e-104 381.7 506 43.9
Prupe.6G116300 Prunus persica HOM05D006347 ORTHO05D007835 1.4e-103 380.9 511 44.6
Gohir.A07G106500 Gossypium hirsutum HOM05D006347 ORTHO05D007835 4.2e-103 379.4 494 45.5
Glyma.13G320700 Glycine max HOM05D006347 ORTHO05D007835 5.4e-103 379.0 513 43.9
Gohir.D07G110400 Gossypium hirsutum HOM05D006347 ORTHO05D007835 1.2e-102 377.9 489 45.4
PSO063G2566 Papaver somniferum HOM05D006347 ORTHO05D007835 2.1e-102 377.1 502 45.2
Ciclev10028160m.g Citrus clementina HOM05D006347 ORTHO05D007835 6.0e-102 375.6 500 45.0
arahy.Tifrunner.gnm1.ann1.PRK8FW Arachis hypogaea HOM05D006347 ORTHO05D007835 7.9e-102 375.2 512 44.1
Manes.04G010900 Manihot esculenta HOM05D006347 ORTHO05D007835 7.9e-102 375.2 494 43.9
Nitab4.5_0005038g0010 Nicotiana tabacum HOM05D006347 ORTHO05D007835 1.0e-101 374.8 482 46.3
Nn2g13927 Nelumbo nucifera HOM05D006347 ORTHO05D007835 1.3e-101 374.4 450 48.0
Potri.009G151100 Populus trichocarpa HOM05D006347 ORTHO05D007835 1.3e-101 374.4 474 44.7
TPR.G32394 Trifolium pratense HOM05D006347 ORTHO05D007835 1.3e-101 374.4 496 45.0
Sc12g0003850 Simmondsia chinensis HOM05D006347 ORTHO05D007835 2.3e-101 373.6 430 47.4
CAN.G1432.26 Capsicum annuum HOM05D006347 ORTHO05D007835 1.5e-100 370.9 425 49.6
Medtr2g084580 Medicago truncatula HOM05D006347 ORTHO05D007835 1.9e-100 370.5 502 44.4
FvH4_3g29990 Fragaria vesca HOM05D006347 ORTHO05D007835 1.3e-99 367.9 502 43.2
VMungo1080G1358 Vigna mungo HOM05D006347 ORTHO05D007835 2.8e-99 366.7 502 43.2
Lsat_1_v5_gn_2_96801 Lactuca sativa HOM05D006347 ORTHO05D007835 3.6e-99 366.3 435 46.7
Sabra09G0119700 Salix brachista HOM05D006347 ORTHO05D007835 3.6e-99 366.3 469 44.8
Hma1.2p1_0884F.1_g232450 Hydrangea macrophylla HOM05D006347 ORTHO05D007835 4.8e-99 365.9 489 44.8
Eucgr.J00411 Eucalyptus grandis HOM05D006347 ORTHO05D007835 1.4e-98 364.4 502 42.0
FAN11G3746 Fragaria x ananassa HOM05D006347 ORTHO05D007835 2.4e-98 363.6 509 42.4
Aqoxy1G01013 Aquilegia oxysepala HOM05D006347 ORTHO05D007835 5.3e-98 362.5 504 44.8
Atru.chr3.3422 Acer truncatum HOM05D006347 ORTHO05D007835 1.5e-97 360.9 477 47.0
PGR119G2351 Punica granatum HOM05D006347 ORTHO05D007835 7.6e-97 358.6 475 43.6
Lj3g0008152 Lotus japonicus HOM05D006347 ORTHO05D007835 9.9e-97 358.2 485 43.3
Psat5g253920 Pisum sativum HOM05D006347 ORTHO05D007835 9.9e-97 358.2 513 43.7
FAN25G1668 Fragaria x ananassa HOM05D006347 ORTHO05D007835 2.9e-96 356.7 442 46.4
CANSAT56G1452 Cannabis sativa HOM05D006347 ORTHO05D007835 6.4e-96 355.5 494 43.3
DCAR_015490 Daucus carota HOM05D006347 ORTHO05D007835 8.4e-96 355.1 511 42.7
AUR62031770 Chenopodium quinoa HOM05D006347 ORTHO05D007835 1.9e-95 354.0 482 41.9
Peaxi162Scf00157g00213 Petunia axillaris HOM05D006347 ORTHO05D007835 1.9e-95 354.0 500 43.4
Sed0011208 Sechium edule HOM05D006347 ORTHO05D007835 2.4e-95 353.6 483 44.3
PGSC0003DMG400007153 Solanum tuberosum HOM05D006347 ORTHO05D007835 2.4e-95 353.6 466 45.7
FAN21G3835 Fragaria x ananassa HOM05D006347 ORTHO05D007835 3.2e-95 353.2 526 41.1
THA.LOC104810888 Tarenaya hassleriana HOM05D006347 ORTHO05D007835 4.2e-95 352.8 473 42.7
Lalb_Chr22g0350521 Lupinus albus HOM05D006347 ORTHO05D007835 5.4e-95 352.4 471 43.1
Cc01_g10020 Coffea canephora HOM05D006347 ORTHO05D007835 1.6e-94 350.9 511 41.1
SalBow6G0094 Salvia bowleyana HOM05D006347 ORTHO05D007835 2.1e-94 350.5 493 41.4
Sopen06g031100 Solanum pennellii HOM05D006347 ORTHO05D007835 2.7e-94 350.1 466 45.1
Actinidia24168 Actinidia chinensis HOM05D006347 ORTHO05D007835 4.6e-94 349.4 438 46.6
Lj2A998T24 Lonicera japonica HOM05D006347 ORTHO05D007835 4.6e-94 349.4 490 42.7
HanXRQChr07g0197561 Helianthus annuus HOM05D006347 ORTHO05D007835 1.3e-93 347.8 418 46.4
CsaV3_6G014560 Cucumis sativus L. HOM05D006347 ORTHO05D007835 1.8e-93 347.4 508 42.1
EL10Ac9g21046 Beta vulgaris HOM05D006347 ORTHO05D007835 6.7e-93 345.5 489 41.9
ECA238G1908 Erigeron canadensis HOM05D006347 ORTHO05D007835 1.5e-92 344.4 455 44.2
AUR62023970 Chenopodium quinoa HOM05D006347 ORTHO05D007835 1.3e-91 341.3 451 43.7
TWI31G1233 Tripterygium wilfordii HOM05D006347 ORTHO05D007835 1.3e-91 341.3 498 42.4
Ca_01691_v3 Cicer arietinum L. HOM05D006347 ORTHO05D007835 3.7e-91 339.7 372 51.1
Ca_30937_v3 Cicer arietinum L. HOM05D006347 ORTHO05D007835 3.7e-91 339.7 372 51.1
Nitab4.5_0003470g0080 Nicotiana tabacum HOM05D006347 ORTHO05D007835 3.7e-91 339.7 478 44.8
Cfa021537 Carpinus fangiana HOM05D006347 ORTHO05D007835 2.4e-90 337.0 508 41.3
Thhalv10013199m.g Eutrema salsugineum HOM05D006347 ORTHO05D007835 1.5e-89 334.3 493 39.8
MSTRG.18715 Avicennia marina HOM05D006347 ORTHO05D007835 3.4e-89 333.2 488 40.8
SGA_v2.0_scaffold27G11587 Striga asiatica HOM05D006347 ORTHO05D007835 3.4e-89 333.2 476 42.2
Sp6g22600 Schrenkiella parvula HOM05D006347 ORTHO05D007835 1.9e-87 327.4 485 40.4
Phvul.005G128700 Phaseolus vulgaris HOM05D006347 ORTHO05D007835 2.5e-87 327.0 369 46.9
MELO3C021469.2 Cucumis melo HOM05D006347 ORTHO05D007835 3.2e-87 326.6 553 38.5
AL6G33930 Arabidopsis lyrata HOM05D006347 ORTHO05D007835 9.3e-87 325.1 493 39.4
CARHR190750 Cardamine hirsuta HOM05D006347 ORTHO05D007835 1.2e-86 324.7 499 39.7
Solyc06g074690.3 Solanum lycopersicum HOM05D006347 ORTHO05D007835 3.5e-86 323.2 532 40.0
arahy.Tifrunner.gnm1.ann1.9T0HEQ Arachis hypogaea HOM05D006347 ORTHO05D007835 4.6e-86 322.8 567 38.1
BcaC03g13920 Brassica carinata HOM05D006347 ORTHO05D007835 6.0e-86 322.4 478 40.4
AT5G22820 Arabidopsis thaliana HOM05D006347 ORTHO05D007835 7.9e-86 322.0 497 38.2
BcaB05g22687 Brassica carinata HOM05D006347 ORTHO05D007835 2.3e-85 320.5 481 40.1
ClCG02G021770 Citrullus lanatus HOM05D006347 ORTHO05D007835 2.3e-85 320.5 451 43.0
Migut.D02321 Erythranthe guttata HOM05D006347 ORTHO05D007835 3.0e-85 320.1 403 45.9
BNapus_Darmor_BZH_scaffold_38p00360 Brassica napus HOM05D006347 ORTHO05D007835 6.7e-85 318.9 484 40.7
Carub.0006s2054 Capsella rubella HOM05D006347 ORTHO05D007835 6.7e-85 318.9 480 40.0
HPP92_014151 Vanilla planifolia HOM05D006347 ORTHO05D007835 3.7e-83 313.2 457 41.8
PSO339G5358 Papaver somniferum HOM05D006347 ORTHO05D007835 1.8e-82 310.8 433 44.6
HPP92_014171 Vanilla planifolia HOM05D006347 ORTHO05D007835 1.8e-82 310.8 457 42.0
C02p11300 Brassica napus HOM05D006347 ORTHO05D007835 2.4e-82 310.5 462 42.2
BraA02t05690Z Brassica rapa HOM05D006347 ORTHO05D007835 1.5e-81 307.8 491 39.3
BolC2t07198H Brassica oleracea HOM05D006347 ORTHO05D007835 6.5e-80 302.4 507 38.7
Haze_23473 Corylus avellana HOM05D006347 ORTHO05D007835 1.1e-79 301.6 502 39.4
Mapoly0004s0056 Marchantia polymorpha HOM05D006347 ORTHO05D007835 1.1e-79 301.6 421 42.5
Hma1.2p1_0884F.1_g232440 Hydrangea macrophylla HOM05D006347 ORTHO05D007835 5.5e-79 299.3 441 42.6
Haze_23489 Corylus avellana HOM05D006347 ORTHO05D007835 9.3e-79 298.5 403 43.9
vmacro03233 Vaccinium macrocarpon HOM05D006347 ORTHO05D007835 9.3e-79 298.5 541 39.0
TAR633G1474 Trochodendron aralioides HOM05D006347 ORTHO05D007835 2.1e-78 297.4 366 48.1
AagrBONN_evm.TU.Sc2ySwM_117.1516 Anthoceros agrestis HOM05D006347 ORTHO05D007835 1.1e-76 291.6 526 36.9
Pp3c4_24670 Physcomitrium patens HOM05D006347 ORTHO05D007835 5.7e-76 289.3 545 36.3
Rhsim13G0103600 Rhododendron simsii HOM05D006347 ORTHO05D007835 8.2e-75 285.4 370 48.1
Os03g0684100 Oryza sativa ssp. japonica HOM05D006347 ORTHO05D007835 3.1e-74 283.5 483 38.1
COL.COLO4_19257 Corchorus olitorius HOM05D006347 ORTHO05D007835 2.2e-72 277.3 445 42.5
Aa31LG1G12890 Aethionema arabicum HOM05D006347 ORTHO05D007835 6.5e-72 275.8 528 36.6
CBR_g54933 Chara braunii HOM05D006347 ORTHO05D007835 6.7e-69 265.8 380 40.8
unitig_899.g14960 Utricularia gibba HOM05D006347 ORTHO05D007835 1.5e-68 264.6 504 33.3
Ah.01g016170 Amaranthus hybridus HOM05D006347 ORTHO05D007835 1.3e-64 251.5 349 43.0
Zm00001eb053190 Zea mays HOM05D006347 ORTHO05D007835 1.4e-63 248.1 369 40.7
Haze_23492 Corylus avellana HOM05D006347 ORTHO05D007835 7.0e-58 229.2 406 37.9
Peaxi162Scf00755g00310 Petunia axillaris HOM05D006347 ORTHO05D007835 2.9e-56 223.8 414 37.2
Glyma.12G180067 Glycine max HOM05D006347 ORTHO05D007835 1.7e-48 198.0 189 55.6
Cpa.g.sc47.36 Carica papaya HOM05D006347 ORTHO05D007835 8.8e-37 159.1 201 44.8
FAN16G0411 Fragaria x ananassa HOM05D006347 ORTHO05D007835 7.5e-36 156.0 167 46.7
Haze_23495 Corylus avellana HOM05D006347 ORTHO05D007835 1.2e-33 148.7 241 41.5
SMO265G0001 Selaginella moellendorffii HOM05D006347 ORTHO05D007835 2.5e-31 141.0 267 34.8
Haze_23480 Corylus avellana HOM05D006347 ORTHO05D007835 2.1e-30 137.9 196 43.9
Ah.01g016190 Amaranthus hybridus HOM05D006347 ORTHO05D007835 1.0e-29 135.6 207 41.5
Glyma.12G180133 Glycine max HOM05D006347 ORTHO05D007835 9.8e-28 129.0 167 38.9
CSS0047528 Camellia sinensis var. sinensis HOM05D006347 ORTHO05D007835 4.1e-18 97.1 145 37.9
SEGI_13685 Sequoiadendron giganteum HOM05D006347 ORTHO05D007835 3.3e-15 87.4 122 39.3
SEGI_35353 Sequoiadendron giganteum HOM05D006347 ORTHO05D007835 1.6e-14 85.1 70 60.0
TAR633G2060 Trochodendron aralioides HOM05D006347 ORTHO05D007835 3.6e-14 84.0 92 47.8
SEGI_37044 Sequoiadendron giganteum HOM05D006347 ORTHO05D007835 2.3e-13 81.3 78 55.1
Hund07723 Selenicereus undatus HOM05D006347 ORTHO05D007835 1.2e-12 79.0 131 39.7
BcaC02g08433 Brassica carinata HOM05D000452 ORTHO05D005748 1.7e-08 65.1 107 37.4
Actinidia14339 Actinidia chinensis HOM05D006347 ORTHO05D007835 2.5e-07 61.2 34 76.5
CDE02G2671 Ceratophyllum demersum HOM05D006347 ORTHO05D007835 2.8e-06 57.8 243 27.2
BolC4t23229H Brassica oleracea HOM05D000452 ORTHO05D005748 3.6e-06 57.4 95 37.9


User provided reference genes

Program Settings