Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0665G468 Amborella trichopoda HOM05D005158 ORTHO05D005510 1.3e-268 929.1 466 100.0
MD16G1026300 Malus domestica HOM05D005158 ORTHO05D005510 8.4e-130 468.0 350 66.9
QL03p033448 Quercus lobata HOM05D005158 ORTHO05D005510 2.1e-128 463.4 351 66.4
TAR374G1701 Trochodendron aralioides HOM05D005158 ORTHO05D005510 3.9e-127 459.1 366 63.7
Duzib251G0375 Durio zibethinus HOM05D005158 ORTHO05D005510 4.3e-126 455.7 426 58.2
Prupe.1G327200 Prunus persica HOM05D005158 ORTHO05D005510 5.7e-126 455.3 351 65.5
Nn4g24217 Nelumbo nucifera HOM05D005158 ORTHO05D005510 7.4e-126 454.9 371 61.2
FAN17G2123 Fragaria x ananassa HOM05D005158 ORTHO05D005510 1.6e-125 453.8 349 66.2
RcHm_v2.0_Chr4g0441611 Rosa chinensis HOM05D005158 ORTHO05D005510 8.2e-125 451.4 349 66.2
Ciclev10015117m.g Citrus clementina HOM05D005158 ORTHO05D005510 1.4e-124 450.7 356 63.8
CSS0029988 Camellia sinensis var. sinensis HOM05D005158 ORTHO05D005510 4.1e-124 449.1 366 63.7
GSVIVG01011734001 Vitis vinifera HOM05D005158 ORTHO05D005510 5.3e-124 448.7 350 64.9
FvH4_4g32690 Fragaria vesca HOM05D005158 ORTHO05D005510 6.9e-124 448.4 349 65.9
PSO478G5200 Papaver somniferum HOM05D005158 ORTHO05D005510 6.9e-124 448.4 376 60.6
FAN12G3950 Fragaria x ananassa HOM05D005158 ORTHO05D005510 3.4e-123 446.0 349 65.6
Manes.17G078700 Manihot esculenta HOM05D005158 ORTHO05D005510 3.4e-123 446.0 373 61.1
Potri.010G111100 Populus trichocarpa HOM05D005158 ORTHO05D005510 4.5e-123 445.7 425 56.5
PSO017G1154 Papaver somniferum HOM05D005158 ORTHO05D005510 5.9e-123 445.3 385 60.3
Cfa008628 Carpinus fangiana HOM05D005158 ORTHO05D005510 7.7e-123 444.9 300 72.0
Actinidia36249 Actinidia chinensis HOM05D005158 ORTHO05D005510 1.3e-122 444.1 357 61.9
Sabra10G0081500 Salix brachista HOM05D005158 ORTHO05D005510 2.9e-122 443.0 397 60.2
COL.COLO4_13149 Corchorus olitorius HOM05D005158 ORTHO05D005510 8.5e-122 441.4 318 68.6
Haze_10977 Corylus avellana HOM05D005158 ORTHO05D005510 1.1e-121 441.0 411 56.4
CDE05G1850 Ceratophyllum demersum HOM05D005158 ORTHO05D005510 7.2e-121 438.3 345 64.6
GSVIVG01008427001 Vitis vinifera HOM05D005158 ORTHO05D005510 9.4e-121 438.0 363 59.8
CANSAT64G2776 Cannabis sativa HOM05D005158 ORTHO05D005510 6.1e-120 435.3 353 62.3
Dinv28033 Davidia involucrata HOM05D005158 ORTHO05D005510 7.9e-120 434.9 301 69.8
Aqoxy3G00071 Aquilegia oxysepala HOM05D005158 ORTHO05D005510 2.3e-119 433.3 357 62.7
QL10p028515 Quercus lobata HOM05D005158 ORTHO05D005510 6.7e-119 431.8 355 61.4
Sc14g0007050 Simmondsia chinensis HOM05D005158 ORTHO05D005510 8.8e-119 431.4 318 67.0
Dinv27619 Davidia involucrata HOM05D005158 ORTHO05D005510 1.5e-118 430.6 359 61.0
Sc14g0006290 Simmondsia chinensis HOM05D005158 ORTHO05D005510 2.0e-118 430.3 336 64.3
Carub.0002s1765 Capsella rubella HOM05D005158 ORTHO05D005510 3.3e-118 429.5 358 59.2
RcHm_v2.0_Chr7g0178481 Rosa chinensis HOM05D005158 ORTHO05D005510 7.4e-118 428.3 418 53.1
SalBow8G1650 Salvia bowleyana HOM05D005158 ORTHO05D005510 1.3e-117 427.6 315 66.3
MD06G1226600 Malus domestica HOM05D005158 ORTHO05D005510 2.2e-117 426.8 470 48.9
Lalb_Chr17g0338591 Lupinus albus HOM05D005158 ORTHO05D005510 4.8e-117 425.6 412 55.1
CiPaw.05G195800 Carya illinoinensis HOM05D005158 ORTHO05D005510 6.3e-117 425.2 320 63.8
PGR119G0382 Punica granatum HOM05D005158 ORTHO05D005510 6.3e-117 425.2 308 67.2
SalBow8G5629 Salvia bowleyana HOM05D005158 ORTHO05D005510 6.3e-117 425.2 315 65.7
MSTRG.4576 Avicennia marina HOM05D005158 ORTHO05D005510 1.1e-116 424.5 455 51.6
CSS0001942 Camellia sinensis var. sinensis HOM05D005158 ORTHO05D005510 1.1e-116 424.5 306 66.3
FAN04G1228 Fragaria x ananassa HOM05D005158 ORTHO05D005510 1.1e-116 424.5 419 53.7
vmacro00408 Vaccinium macrocarpon HOM05D005158 ORTHO05D005510 4.1e-116 422.5 443 53.3
HanXRQChr08g0212241 Helianthus annuus HOM05D005158 ORTHO05D005510 1.2e-115 421.0 355 60.0
Ciclev10008271m.g Citrus clementina HOM05D005158 ORTHO05D005510 1.5e-115 420.6 384 54.7
Cc11_g08400 Coffea canephora HOM05D005158 ORTHO05D005510 2.6e-115 419.9 346 59.5
Haze_18844 Corylus avellana HOM05D005158 ORTHO05D005510 2.6e-115 419.9 402 56.2
Phvul.003G032200 Phaseolus vulgaris HOM05D005158 ORTHO05D005510 2.6e-115 419.9 390 57.2
TWI75G0580 Tripterygium wilfordii HOM05D005158 ORTHO05D005510 2.6e-115 419.9 378 58.5
Cc11_g08410 Coffea canephora HOM05D005158 ORTHO05D005510 3.4e-115 419.5 349 59.3
Eucgr.G02179 Eucalyptus grandis HOM05D005158 ORTHO05D005510 4.5e-115 419.1 345 60.0
FvH4_5g17290 Fragaria vesca HOM05D005158 ORTHO05D005510 7.7e-115 418.3 356 60.1
Lsat_1_v5_gn_8_45001 Lactuca sativa HOM05D005158 ORTHO05D005510 1.7e-114 417.2 351 61.3
CSS0029687 Camellia sinensis var. sinensis HOM05D005158 ORTHO05D005510 2.2e-114 416.8 341 62.5
Sed0000270 Sechium edule HOM05D005158 ORTHO05D005510 8.5e-114 414.8 355 59.7
CAN.G236.18 Capsicum annuum HOM05D005158 ORTHO05D005510 1.1e-113 414.5 368 58.7
Thecc.03G054800 Theobroma cacao HOM05D005158 ORTHO05D005510 1.4e-113 414.1 369 57.5
COL.COLO4_37683 Corchorus olitorius HOM05D000282 ORTHO05D005510 2.5e-113 413.3 391 54.5
AUR62014187 Chenopodium quinoa HOM05D005158 ORTHO05D005510 4.2e-113 412.5 304 65.8
FvH4_5g11940 Fragaria vesca HOM05D005158 ORTHO05D005510 1.2e-112 411.0 339 61.9
MELO3C014995.2 Cucumis melo HOM05D005158 ORTHO05D005510 1.6e-112 410.6 351 59.5
Ah.02g127790 Amaranthus hybridus HOM05D005158 ORTHO05D005510 2.1e-112 410.2 308 64.6
Migut.L00352 Erythranthe guttata HOM05D005158 ORTHO05D005510 3.6e-112 409.5 381 56.7
CsaV3_5G015040 Cucumis sativus L. HOM05D005158 ORTHO05D005510 6.1e-112 408.7 356 58.4
Sabra15G0037900 Salix brachista HOM05D005158 ORTHO05D005510 6.1e-112 408.7 325 61.8
MSTRG.13599 Avicennia marina HOM05D005158 ORTHO05D005510 7.9e-112 408.3 310 66.5
Sopen05g014580 Solanum pennellii HOM05D005158 ORTHO05D005510 7.9e-112 408.3 380 57.1
FAN18G0401 Fragaria x ananassa HOM05D005158 ORTHO05D005510 1.8e-111 407.1 304 64.8
Duzib205G1388 Durio zibethinus HOM05D005158 ORTHO05D005510 3.0e-111 406.4 356 57.0
FAN22G1395 Fragaria x ananassa HOM05D005158 ORTHO05D005510 3.0e-111 406.4 349 61.6
Migut.D01553 Erythranthe guttata HOM05D005158 ORTHO05D005510 3.9e-111 406.0 302 64.6
Lj2g0016958 Lotus japonicus HOM05D005158 ORTHO05D005510 5.1e-111 405.6 337 60.2
Cc04_g06310 Coffea canephora HOM05D005158 ORTHO05D005510 1.5e-110 404.1 313 62.9
FAN18G4517 Fragaria x ananassa HOM05D005158 ORTHO05D005510 2.6e-110 403.3 347 60.5
CiPaw.15G143000 Carya illinoinensis HOM05D005158 ORTHO05D005510 4.4e-110 402.5 384 55.7
ClCG07G007220 Citrullus lanatus HOM05D005158 ORTHO05D005510 4.4e-110 402.5 356 58.4
SGA_v2.0_scaffold234G43623 Striga asiatica HOM05D005158 ORTHO05D005510 5.7e-110 402.1 332 62.0
FAN18G3280 Fragaria x ananassa HOM05D005158 ORTHO05D005510 2.8e-109 399.8 356 59.0
Atru.chr9.1740 Acer truncatum HOM05D005158 ORTHO05D005510 6.3e-109 398.7 334 60.8
Oeu046166.1 Olea europaea HOM05D005158 ORTHO05D005510 8.2e-109 398.3 301 62.5
FAN13G1699 Fragaria x ananassa HOM05D005158 ORTHO05D005510 1.1e-108 397.9 368 57.3
Os03g0707200 Oryza sativa ssp. japonica HOM05D005158 ORTHO05D005510 7.0e-108 395.2 294 65.0
FAN08G3331 Fragaria x ananassa HOM05D005158 ORTHO05D005510 1.1e-105 387.9 326 61.0
HanXRQChr08g0212251 Helianthus annuus HOM05D005158 ORTHO05D005510 1.9e-105 387.1 311 59.5
ECA233G1067 Erigeron canadensis HOM05D005158 ORTHO05D005510 3.3e-102 376.3 320 58.4
SalBow1G1317 Salvia bowleyana HOM05D005158 ORTHO05D005510 8.2e-101 371.7 301 59.8
Lj6A744G51 Lonicera japonica HOM05D005158 ORTHO05D005510 5.3e-100 369.0 272 67.6
AUR62039517 Chenopodium quinoa HOM05D005158 ORTHO05D005510 1.1e-97 361.3 368 51.1
Hund20682 Selenicereus undatus HOM05D005158 ORTHO05D005510 1.9e-97 360.5 256 68.0
CSS0046275 Camellia sinensis var. sinensis HOM05D005158 ORTHO05D005510 4.0e-95 352.8 324 57.4
Rhsim09G0065800 Rhododendron simsii HOM05D005158 ORTHO05D005510 1.4e-92 344.4 313 58.8
Rhsim09G0065900 Rhododendron simsii HOM05D005158 ORTHO05D005510 5.4e-92 342.4 289 60.6
VMungo1215G0718 Vigna mungo HOM05D005158 ORTHO05D005510 5.4e-92 342.4 527 41.4
Peaxi162Scf00159g01112 Petunia axillaris HOM05D005158 ORTHO05D005510 3.4e-86 323.2 264 61.7
FAN13G2578 Fragaria x ananassa HOM05D005158 ORTHO05D005510 7.0e-84 315.5 368 50.0
HPP92_016306 Vanilla planifolia HOM05D005158 ORTHO05D005510 2.9e-82 310.1 330 53.6
Prupe.5G232900 Prunus persica HOM05D005158 ORTHO05D005510 6.6e-74 282.3 245 58.0
Pp3c5_19920 Physcomitrium patens HOM05D005158 ORTHO05D005510 4.0e-71 273.1 295 46.1
Solyc05g017900.3 Solanum lycopersicum HOM05D005158 ORTHO05D005510 1.5e-70 271.2 294 53.1
Dinv14415 Davidia involucrata HOM05D005158 ORTHO05D005510 6.4e-69 265.8 355 46.8
HPP92_016287 Vanilla planifolia HOM05D005158 ORTHO05D005510 2.7e-67 260.4 256 51.6
Zm00001eb054470 Zea mays HOM05D005158 ORTHO05D005510 4.3e-65 253.1 191 61.3
AUR62014186 Chenopodium quinoa HOM05D005158 ORTHO05D005510 5.2e-63 246.1 262 48.5
Thecc.02G284700 Theobroma cacao HOM05D005158 ORTHO05D005510 8.9e-63 245.4 210 60.0
Potri.008G130950 Populus trichocarpa HOM05D005158 ORTHO05D005510 1.5e-62 244.6 277 50.2
SEGI_17459 Sequoiadendron giganteum HOM05D005158 ORTHO05D005510 3.9e-58 229.9 186 58.1
Oeu003374.1 Olea europaea HOM05D005158 ORTHO05D005510 1.9e-57 227.6 167 66.5
FAN07G0555 Fragaria x ananassa HOM05D005158 ORTHO05D005510 8.1e-56 222.2 153 70.6
PRCOL_00003969 Prasinoderma coloniale HOM05D005158 ORTHO05D005510 7.6e-54 215.7 301 41.2
AagrBONN_evm.TU.Sc2ySwM_344.3657 Anthoceros agrestis HOM05D005158 ORTHO05D005510 6.4e-53 212.6 292 42.1
Oeu014055.2 Olea europaea HOM05D005158 ORTHO05D005510 3.4e-46 190.3 140 64.3
Manes.06G007150 Manihot esculenta HOM05D005158 ORTHO05D005510 4.8e-40 169.9 192 49.0
Cpa.g.sc570.2 Carica papaya HOM05D005158 ORTHO05D005510 3.1e-39 167.2 203 47.8
HPP92_027195 Vanilla planifolia HOM05D005158 ORTHO05D005510 2.9e-37 160.6 186 46.2
Zm00001eb280420 Zea mays HOM05D005158 ORTHO05D005510 1.9e-33 147.9 147 53.1
HanXRQChr08g0212291 Helianthus annuus HOM05D005158 ORTHO05D005510 1.8e-31 141.4 114 57.9
Duzib068G0898 Durio zibethinus HOM05D005158 ORTHO05D005510 1.4e-28 131.7 171 43.3
Os06g0269200 Oryza sativa ssp. japonica HOM05D005158 ORTHO05D005510 1.6e-27 128.3 83 67.5
AagrBONN_evm.TU.Sc2ySwM_368.719 Anthoceros agrestis HOM05D005158 ORTHO05D005510 2.5e-25 120.9 337 28.5
Prupe.5G232800 Prunus persica HOM05D005158 ORTHO05D005510 5.6e-25 119.8 87 66.7
MD16G1025900 Malus domestica HOM05D005158 ORTHO05D005510 1.8e-23 114.8 77 72.7
PGR044G0956 Punica granatum HOM05D005158 ORTHO05D005510 1.5e-22 111.7 199 38.7
Gohir.D02G122150 Gossypium hirsutum HOM05D005158 ORTHO05D005510 3.4e-22 110.5 192 38.5
Thecc.02G284900 Theobroma cacao HOM05D005158 ORTHO05D005510 3.4e-22 110.5 193 37.3
TAR622G0559 Trochodendron aralioides HOM05D005158 ORTHO05D005510 4.5e-22 110.2 99 60.6
PRCOL_00000423 Prasinoderma coloniale HOM05D005158 ORTHO05D005510 1.1e-20 105.5 221 32.1
DCAR_007307 Daucus carota HOM05D005158 ORTHO05D005510 1.2e-19 102.1 97 54.6
Peaxi162Scf00159g01110 Petunia axillaris HOM05D005158 ORTHO05D005510 1.0e-18 99.0 55 78.2
Solyc05g017940.3 Solanum lycopersicum HOM05D005158 ORTHO05D005510 3.9e-18 97.1 55 76.4
Gorai.005G131900 Gossypium raimondii HOM05D005158 ORTHO05D005510 1.1e-17 95.5 144 38.9
AagrBONN_evm.TU.Sc2ySwM_117.460 Anthoceros agrestis HOM05D005158 ORTHO05D005510 2.1e-16 91.3 328 26.5
HanXRQChr08g0212271 Helianthus annuus HOM05D005158 ORTHO05D005510 2.8e-16 90.9 62 64.5
C06p44960 Brassica napus HOM05D005158 ORTHO05D005510 4.8e-16 90.1 109 48.6
Manes.09G075257 Manihot esculenta HOM05D005158 ORTHO05D005510 6.3e-16 89.7 59 69.5
MCO07G148 Micromonas commoda HOM05D005158 ORTHO05D005510 1.1e-15 89.0 186 31.2
Pp3c15_24210 Physcomitrium patens HOM05D005158 ORTHO05D005510 2.6e-14 84.3 256 28.5
Cpa.g.sc130.33 Carica papaya HOM05D005158 ORTHO05D005510 2.9e-13 80.9 62 61.3
MCO04G437 Micromonas commoda HOM05D005158 ORTHO05D005510 2.7e-11 74.3 278 24.1
MCO07G404 Micromonas commoda HOM05D005158 ORTHO05D005510 7.9e-11 72.8 263 24.0
RcHm_v2.0_Chr7g0199801 Rosa chinensis HOM05D005158 ORTHO05D005510 5.1e-10 70.1 63 54.0
PRCOL_00004141 Prasinoderma coloniale HOM05D036318 ORTHO05D005510 1.6e-08 65.1 237 25.3
Aqoxy2G01678 Aquilegia oxysepala HOM05D005158 ORTHO05D005510 1.4e-07 62.0 62 45.2


User provided reference genes

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